Basic Information

Insect: Drosophila trichaetosa
Gene Symbol: -
Assembly: GCA_035043205.1
Location: JAWNNE010000066.1:720121-725075[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00034 0.022 15.2 1.2 2 23 145 166 144 166 0.97

2 12 0.00013 0.0087 16.5 1.3 1 23 405 427 405 427 0.98

3 12 3.2 2.1e+02 2.7 0.8 1 23 433 456 433 456 0.92

4 12 9.4 6.2e+02 1.2 0.3 1 23 485 508 485 508 0.89

5 12 0.00046 0.031 14.7 2.3 3 23 776 796 775 796 0.96

6 12 0.046 3.1 8.4 1.4 1 23 802 825 802 825 0.98

7 12 0.0029 0.2 12.2 0.7 1 23 905 928 905 928 0.97

8 12 0.011 0.74 10.4 0.4 1 23 1079 1102 1079 1102 0.92

9 12 6.8e-05 0.0045 17.4 3.2 1 23 1116 1138 1116 1138 0.98

10 12 0.0015 0.1 13.1 4.0 2 23 1170 1194 1169 1194 0.90

11 12 0.043 2.9 8.5 0.3 1 23 1199 1221 1199 1221 0.97

12 12 0.013 0.87 10.2 1.3 1 23 1227 1250 1227 1250 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00034	0.022	15.2	1.2	2	23	145	166	144	166	0.97
2	12	0.00013	0.0087	16.5	1.3	1	23	405	427	405	427	0.98
3	12	3.2	2.1e+02	2.7	0.8	1	23	433	456	433	456	0.92
4	12	9.4	6.2e+02	1.2	0.3	1	23	485	508	485	508	0.89
5	12	0.00046	0.031	14.7	2.3	3	23	776	796	775	796	0.96
6	12	0.046	3.1	8.4	1.4	1	23	802	825	802	825	0.98
7	12	0.0029	0.2	12.2	0.7	1	23	905	928	905	928	0.97
8	12	0.011	0.74	10.4	0.4	1	23	1079	1102	1079	1102	0.92
9	12	6.8e-05	0.0045	17.4	3.2	1	23	1116	1138	1116	1138	0.98
10	12	0.0015	0.1	13.1	4.0	2	23	1170	1194	1169	1194	0.90
11	12	0.043	2.9	8.5	0.3	1	23	1199	1221	1199	1221	0.97
12	12	0.013	0.87	10.2	1.3	1	23	1227	1250	1227	1250	0.97

Sequence Information

Coding Sequence: ATGGCGCACAAACATTTGAAAGCAGCGGACTTGgaaatcaattacaaattcGCATGTCGCTGTTGCCTCAAATCCGAGGCGGAATTCTTCAAGCTGGACTCCCTCATCGACTGTGGCAACGATGATGGCAATGATAATGACAATGATGCCTCGTCCCCAACCAAATTGCCCCTGTTGCGTTTACTGCTCTTTTGCATGCGCACCGAAAATCTGCCCGAGCTGCCGCAATACATTTGCGTGGATTGCCgcaaaagtttgcaaattgCCTACTATTTCATACAAAACGGTTTGCGTGCCCACGAAATATTGTGTCGCAAACTGTGTCCGGGCAAGCTGCAAACCAAACCGCGCATCAACGGACAACACTTAGCCCTAAGGATCGAGACAAAAGCTGGCGCATCGTTGCTGGACACGCACAGGGAGAAACCcctaaaatgcaaaatatgcggTGAGATTATCCGCAATCGTCTGGAGCTCAAACATCATCTACGAATGCATTCagAGTCTCGACATCAGTgtaaattgtgtaattttgtAACGCTTAAGCATCGCCAGCTGCTGGAACACTATCGTAAATCGCATGGCTTGACATCGGCCCAAATTGAGCATCAGTTGAAATTACGAAAATCGCTGCAGGCGGCTGccagtgcaacaacaacaggaaaagCGACAGCAGTTTTATCCACAGAAGCTCCTGCTGCGGATGATGATGGTCAGGTGAAGGTGTGCACAATGGAGGACATGGAGCTGCTGATACCCACAGTGATGAGGCCCGAGGATTTCACGTACCCACAACTGGATGCGGATCAATTGCGTGACATTGAACAGCAATTGACGAGTAGCTCGCTGGGATTGCCCAACCCAACAGCTGCATTCACGGAACCAGTGACGGCAAATGCCAGCGGAAGCAGTGCCAATATGAGCATAGGTGCGGAGTTTCTGGTCTTGCCGGATGGCACGTTGCAGCAGGTGAATGATGCTGGCGTTGTCTTCGAATATATTGATGATAGTAAAAATACGGCCAgcacagtaacagcaacaaccacatcgACCAATGTGACGCTGGAGAGCCTGTTGAGTGACTCGAAAACCGATTTAACCTATGATTCAATGGCCATTAATCTGAGTCACATGGCTGTCGATAATGCGCTGCCACAGATAACAGTCAAGCCCAAGACGCGACCAGTGCCAGCTTCAACTGGTGCCCTGAAACACAAATGCAAGCTGTGCCCCAAAGCATTTCCGACGGTGGCACGCCTCAAATCTCACCAGCTAACGCATAGCCATTTACCCAAATTCTATTGTGATCAATGCACATATTATTCGCTGCGCAGCGCAGATCTCATCCAGCATTATACGAGCGAGCATAATGTATGCGTTAGCGATACGAAAGCTAGTCAAGTGGAAAAGTCACCAATGCTGACGGCAATGTTAACGGATCGCAATCGCATTTTCTCCTGCGATATGTGTCTTTTTGAGACGCCGAGCGGCGCTCAGCTGCGCTTGCATTACAGTGATAAGCATCTCATTGTGCCCAGTGAGATACAGCTGCGTCCCAGCTGGATCAGGGATCAGCAGGATGGCAatgcaaaactgaaaagtgGCGACGGCAGCACAACACCAGACATTCCTCTGGGCATTAAATATCCAACCGTGACGCAgtgtgcagcagccacaacggcggcgacaacaacaagcatgGTGCAAGAGCcgcaagcaataacaacaacaacaacggctgTGACTTCAAAGGGTGGCATCAATGTCGTCGTGGATGCCAGCTCTTTATtctatgcaacaacaacaacaacaacggacgCAACATCAACAGATTCAAGCACAATTGCAATATTTCCAGAGCAATGCCtgtcaaaaacaacaacaaccatagcAAAGGCAGCATCAACAAGACAGGAAGCAAGCAGTcaggcagtggcaacaacaacagcaacaaatcccAATACTAGCACATTTGGTGATATGCAGGAGTTTATAGATAATACAGATGTGGCAGCCATATGCACAATACCCGCCGACGATATGCCTGTGGATGGCGATGATATCGTcatcgataataataatattagtcTGGATTTTGATGCTGAAAATCTATTTGAGGAATTTGAAGATGTCGAAGTTAGCGAAGAGGTTGACGATGTCGACGCTGACGAAgatgacgaggatgaggatgaggatgatgcggataatgatgatgagaaTGATAACAATGATGCGGCTACCGATCAAAATCTATTGCTAACcagcgacgatgacgatgtggATGACTTTGACGACGAACAATCGAAGCATCTGCAGAAACCCTATTGTGtattttgcaacaaaaagtttACCAGCCAATACAAGTTCGAGAATCACATGTTTGTGCATCGCGGTTTGGCACCATATCGCTGTGAGCTGTGCACCAATCTGTACAATATGAAACGCCTGCTCATACGACACTATAAAACAGTTCACAAAAAGATGCCCACGCGGGACATGGTGCAGGCCAAGGGCGACAAGGTAGACGTGCCGTGTGCGGCTATcgaaaagataaatataaatgcggACAAAAatcCCTTGCTGATGTGCGCCAAGTGTCCCTTTGAAGGTGAGCTGGATGTGGATATGCTCAAGCATTTAAATGCCCATCATGGCATCAGCGATGGGGTTTCCATGCATGCCAACGAAGTGTTTATCATACGCAAACTGCCTTATGAGTGTCCACGCTGTATTCGTTCATTTGCGGCAAAGCGAACGTTGACACGCCATTTGCAGCGTAGCCATTTGGTGGATACAATCATTGAGATGCAGGCGCTGCAATTGACAACCAGTTCGGCGGCAACTACAACcacagcgacgacaacaaccacattaCCTAACAATGCCAGCGATGGCAGTACAGCCACAGCACATGCGGTTGAGGAGTCGGGCAACAAGAGCAATATCGATGTTGGTCTTCGCGATGGCGGCGATAGAAAATGCGACTTTACACCAACAACGCAACAGTCTGCGGTCTCATCGCTTTTTCCAACGCCCACGCCTTTTGACTTTGATCTTGACTTCATTGGCAACGTGGCAGATGCCACAACGctgaagaacaacaacgatgatAGCTTCAATGTGGCATCTCTGCCTCCGCCTCTACTGCTAAATGGCAGCGATAAGTTGCTGACTGCCGCCTTGGAGCCGTCGCCCGTTAAGGATTTGCGTCCACGTCTGCCCCGTACCCCCATCTATGTGTGCAAGCAATGCAATCAAACGTTCGACGAGCTGGCCAAACTGTTGCAGCACGAGCTGCAGCAACATTCCAGTGGCACGATGTCCTCGCCACGCAGCAGCTATCAGCATAAGTGCAAGATCTGTAATGCCTCCTACCGCACTGCGACCCTCCTCAATTATCACATGAAGCGACATACGCCGGTCAAAGTGCCCTGCAAGGAGTTCCAGGTTAGCACGGAGTTGGAGCAACATGTTCCGTCCGATCATCGTGCCAATAGTGGTCCACTCAAATGTGGCATCGATGGGTGTAGGAAAACCTTCAATTACAAGCATCATTTGAAGCGACATCAGACCGCATCGCATACGCCTGTGCAATATATTTGTTCGGTGTGCGGACGAGATTTGTTGACCAGTCTGTATCTGAGGAATCACATGTCCATGCACCGGGGCACCCACTCCTACAAGTGCCCCAGGTGCGTGCGCACCTATATGCGCCGTAATCCTTTCCGTCGACATGCGATGCGGGAACACAAATGGGAGTTGACGGATGCGgaaattgataaaatatattgtgaaAATGATTCAACGCCATCAATAATATTGCGCGATTTGCGGTGA
Protein Sequence: MAHKHLKAADLEINYKFACRCCLKSEAEFFKLDSLIDCGNDDGNDNDNDASSPTKLPLLRLLLFCMRTENLPELPQYICVDCRKSLQIAYYFIQNGLRAHEILCRKLCPGKLQTKPRINGQHLALRIETKAGASLLDTHREKPLKCKICGEIIRNRLELKHHLRMHSESRHQCKLCNFVTLKHRQLLEHYRKSHGLTSAQIEHQLKLRKSLQAAASATTTGKATAVLSTEAPAADDDGQVKVCTMEDMELLIPTVMRPEDFTYPQLDADQLRDIEQQLTSSSLGLPNPTAAFTEPVTANASGSSANMSIGAEFLVLPDGTLQQVNDAGVVFEYIDDSKNTASTVTATTTSTNVTLESLLSDSKTDLTYDSMAINLSHMAVDNALPQITVKPKTRPVPASTGALKHKCKLCPKAFPTVARLKSHQLTHSHLPKFYCDQCTYYSLRSADLIQHYTSEHNVCVSDTKASQVEKSPMLTAMLTDRNRIFSCDMCLFETPSGAQLRLHYSDKHLIVPSEIQLRPSWIRDQQDGNAKLKSGDGSTTPDIPLGIKYPTVTQCAAATTAATTTSMVQEPQAITTTTTAVTSKGGINVVVDASSLFYATTTTTTDATSTDSSTIAIFPEQCLSKTTTTIAKAASTRQEASSQAVATTTATNPNTSTFGDMQEFIDNTDVAAICTIPADDMPVDGDDIVIDNNNISLDFDAENLFEEFEDVEVSEEVDDVDADEDDEDEDEDDADNDDENDNNDAATDQNLLLTSDDDDVDDFDDEQSKHLQKPYCVFCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKKMPTRDMVQAKGDKVDVPCAAIEKININADKNPLLMCAKCPFEGELDVDMLKHLNAHHGISDGVSMHANEVFIIRKLPYECPRCIRSFAAKRTLTRHLQRSHLVDTIIEMQALQLTTSSAATTTTATTTTTLPNNASDGSTATAHAVEESGNKSNIDVGLRDGGDRKCDFTPTTQQSAVSSLFPTPTPFDFDLDFIGNVADATTLKNNNDDSFNVASLPPPLLLNGSDKLLTAALEPSPVKDLRPRLPRTPIYVCKQCNQTFDELAKLLQHELQQHSSGTMSSPRSSYQHKCKICNASYRTATLLNYHMKRHTPVKVPCKEFQVSTELEQHVPSDHRANSGPLKCGIDGCRKTFNYKHHLKRHQTASHTPVQYICSVCGRDLLTSLYLRNHMSMHRGTHSYKCPRCVRTYMRRNPFRRHAMREHKWELTDAEIDKIYCENDSTPSIILRDLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00557462;
90% Identity: iTF_00496942;
80% Identity: -