Basic Information

Insect: Drosophila trichaetosa
Gene Symbol: -
Assembly: GCA_035043205.1
Location: JAWNNE010000291.1:1073409-1077810[+]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.7e-14 7.3e-11 41.5 0.0 8 73 322 383 316 386 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.7e-14	7.3e-11	41.5	0.0	8	73	322	383	316	386	0.88

Sequence Information

Coding Sequence: ATGAACTCGACATCAACAGGCATATCTAAAAAAAGATCCAGCCGCTCAAGATCGAGCTCAAGGCATATTTATGAAGATACACGCTCAAGCAGCGATTGGTATTCTTCAAGCTCAAATGACAGTCGTAAAAGACTCAGGATCAGACGCAGCCAAACGAGGGAGGAGGCTATAGTGGGTTGGGAGGGCAAGTTTCCGAATTTCCTGGAGAGCAACTCAGACGTGGAAGAGATGCACCAGCTACCGACTGAAGAAAAGGCCATTTCTGTCACTGGGCTCAGCATTTTTCCCAGAGagcaagaggaagaggaaCAATCGCAGCCGCAGCCAGCACCGCAGACACCGCTGTCATCAAAGCCGTCGTCTGATTCTGATTCCTCATCCCCCGTTTCAAATATGAATTCAGCtctaacaacagcaacagccacagccacatcaAACACAACAGCTATAAgcacacatgccacaaattCGACTGAGGCAGGTCTAAAGACTGCTACGCAGACAATCAACACCAACTGCGATATCAGCGATATCAACATTACCAGCAATAATGACAGCGGTTCAACCTCAATGCCAAGTGCAACATCTTCTCCACAACCATTAGCAGAGCCAAAAACAGAATCAGAACCAGAAACTGATTTAGACAAGCAGAAGGTGGCGTTAGCGGCCTCGCAAACCGGCAAACCCGAtgcaggagaaggaggaggaggcagcATCTGCCTGCGCTCTCGCATGCACTCTCGCATGCGCTTTACATCCTATAGTGCATCATCCAGCAATGAGGCCAGCGAAACGACAAATCACCTCAAGAAATCAACAGAAGACAAGGATCATCCACCCAGCATGCTGTCGTTGCGCTCCAAATCGATGTACCAATCTGACCCCACTAGTAGTGATGCAAAGACGCGCAAACGCCGTCGCTCGGTTTCTGCGAACAATTTGCCGGTCACAGATGCCTTTTATTGCTTGCCCTTCAAGCACGGCTGGAAGCGTGAATTGGTGTTGCGTAGCAGTGATAACAATGCGCGCCAGCAAGCCGATGTTGTATTCATATCGCCTTCGGGCAGAAAGCTGCGCACGAGAAATGACATTATCCCACTGCTTGTGCCCGATCTGTCAATTgataatttttgctttaagCCCCAGCTTCAAAATGTTGGCGAGCAATACGAAACGGTCCGCCAGGGTCTGTCTGCTAAGGAACGTCGCAAATCGATGGCCGTTGCAAAGCAGGAGAAACAGCAAGGGCAAGGGCaacagaagcaaaaacaacaaggacagcagcaacagccagaacaacagcagcagctggctaACACCATCGATTCGGGCCAACAAGCAGCATCAGCGCTAACACCCGTATTCGGGAAACGTGTGCCTAAGCCTAAGGTGCCCAAGGGCGCTAGCCCGCCGCACGAGGGTTGGACCTCAACGATGGCTGTCAAGGGAAATGCTCGCGTCCTGGCTGCGAGCAATGGTAACAGTGGCGGCATCGGCTCTAGCGCCAGCAACAGCGCACGCAGACGTGGCAGCAACCAGCCGAGCAAATCAACAAAGGCAGCACCAGAGACGCCGACGGCTGTGCAGTCGAAGTTGCCGCTCCAGCCGCAGTCAGCAGTTAAGACGATACTAACTTGTGCGAAATGCTTGCAGGAAATTAGTGACACCAATCAAGCATTTCGTGTCGGGCTGAGCACTGTCGAGAGCTACATCTGCAAGCGCTGTGTTACGCCAGGCAGCAATGCTTCCCTTTCACCGACAGCAGATATAgcacgacagcagcagcaggcacgtGGACATGGACATGCAAGTGTCAATGACAATGGCAATGGAAACAATAAACTGGATAAGGAAGTGATCGATGAGAATGTGAACGCCACCGGCAATGGGGTCATCGTCACAGAGATTGAACTGCCCGGCGCTCTGCCGCCTGCTAAGCTGCTCAGAGATGATTCTCCTGCACGTCGTGGCGGTAGAAAGATAACGCCAAAGCCAATGGAGGTGGTTGTTATTAACGGTCGCAAGGCTATCGCAATTGCTGTCTCGCCACGGCATACGCGTCCGCCAGTACCACTCTTTACAGACGCTCCGAACTTGGCCATCAATGCAAGAGCTTTATCTAGGCGCAACTCAGATTTACGTAAGCAAGTCGCTGATCGTCTTTCTGGTGGCATTGAGGGTTGCAAGCTGATGACGGCCATTATGAAGACGGTTGACCTGCACGTACGTGTGCGCTTGTCAAGTGTGTGCAAGACCTGGTCTATGATATACCACGATAGCAGCGTGTGGGGCAGTGTGAAGTTGCGCGATACGCACATCAGCAACTGGCAGAGTCTGCTGCATTATATGAAGGTCTATTGCACCACCGAGCTCGATATGATGGGCGTGAAATTCGACAATCCGAAGATGCGCTTGGACGGTGATTTGCGAGATTTGAAATCGTTGCGTATTCTACGCACCGATGCCAGCGAGGCGAAGTTCATCGAGACAATTGTGAAGAGCATGCCACAACTGCTGGAGCTCCGCGCAACTTGCACCAGTCGTGCTCTGAATCTGGCCAACATCGAAACGATGTTGGGTTTGCGTGTGCTGCGCATTCGCATGCTGGAGCCGCAGGCCAGCATAATTtcattgccgctgctgcagaagTTAAGCTGCTTGCGAGAACTGAGCTTGCGCGGCATTAGCAACATGGCTCAGCTGGAGTTGTTGCAGCTGGAGGGATTGCAGCAGTTGGAGACGCTTGTGCTGGGCTCGTGTCGCGGCATGAAGGTGGCAACGTTCGGGCAACAAGTGCTGCCCAGTCTGAAGCGTTTGCGCCACTTGCGCCTGGAGAACCACCACAGCAATCgctcatttaatataaaagaGATCATGGATGGCATTGCCGCCGCTGGCAGTGTGAAGCGTGTCGAACTCATCAATGTCAACGTAGATGCGGAGTTGAGTCATCAGTTGTCCGAGTGTAAATCGTtgcaggagctgctgctgttgccaaattTCCACGATCGTACCGCTTATATGGTGCACTACGTTATGCAGGCCATCAACGAGAACAGCGATCAGCTCAACGTGTTCCACCTGGGGATCACCTACGAACTGCTCAGCGTGACTCGGGCATTGGGCATGATCCACGAAAAGGACTGTGTGCcagtgctgctgccaattCCGGGCGTTGCCGAAAATGATGTACTGAATGAGTCCGATGAGTCAATCGCCTATTTGCCGGTGGATCGCCTCGAATCGATTTTACATCACATGATGCCGCAGGCTTGGCTAACCGTCGCCAAGGTTTCACAGCTCGAGACAATGAATCTGAAATTCGTGCCGGCTCCAATCGCCGTCAAAGCCGGCTTTTTAAACAACTAA
Protein Sequence: MNSTSTGISKKRSSRSRSSSRHIYEDTRSSSDWYSSSSNDSRKRLRIRRSQTREEAIVGWEGKFPNFLESNSDVEEMHQLPTEEKAISVTGLSIFPREQEEEEQSQPQPAPQTPLSSKPSSDSDSSSPVSNMNSALTTATATATSNTTAISTHATNSTEAGLKTATQTINTNCDISDINITSNNDSGSTSMPSATSSPQPLAEPKTESEPETDLDKQKVALAASQTGKPDAGEGGGGSICLRSRMHSRMRFTSYSASSSNEASETTNHLKKSTEDKDHPPSMLSLRSKSMYQSDPTSSDAKTRKRRRSVSANNLPVTDAFYCLPFKHGWKRELVLRSSDNNARQQADVVFISPSGRKLRTRNDIIPLLVPDLSIDNFCFKPQLQNVGEQYETVRQGLSAKERRKSMAVAKQEKQQGQGQQKQKQQGQQQQPEQQQQLANTIDSGQQAASALTPVFGKRVPKPKVPKGASPPHEGWTSTMAVKGNARVLAASNGNSGGIGSSASNSARRRGSNQPSKSTKAAPETPTAVQSKLPLQPQSAVKTILTCAKCLQEISDTNQAFRVGLSTVESYICKRCVTPGSNASLSPTADIARQQQQARGHGHASVNDNGNGNNKLDKEVIDENVNATGNGVIVTEIELPGALPPAKLLRDDSPARRGGRKITPKPMEVVVINGRKAIAIAVSPRHTRPPVPLFTDAPNLAINARALSRRNSDLRKQVADRLSGGIEGCKLMTAIMKTVDLHVRVRLSSVCKTWSMIYHDSSVWGSVKLRDTHISNWQSLLHYMKVYCTTELDMMGVKFDNPKMRLDGDLRDLKSLRILRTDASEAKFIETIVKSMPQLLELRATCTSRALNLANIETMLGLRVLRIRMLEPQASIISLPLLQKLSCLRELSLRGISNMAQLELLQLEGLQQLETLVLGSCRGMKVATFGQQVLPSLKRLRHLRLENHHSNRSFNIKEIMDGIAAAGSVKRVELINVNVDAELSHQLSECKSLQELLLLPNFHDRTAYMVHYVMQAINENSDQLNVFHLGITYELLSVTRALGMIHEKDCVPVLLPIPGVAENDVLNESDESIAYLPVDRLESILHHMMPQAWLTVAKVSQLETMNLKFVPAPIAVKAGFLNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00521346;
90% Identity: iTF_00574042;
80% Identity: -