Dtri001951.1
Basic Information
- Insect
- Drosophila triauraria
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_014170255.2
- Location
- CM024333.1:14716761-14720022[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-105 3.4e-101 338.5 13.2 1 276 29 301 29 307 0.94
Sequence Information
- Coding Sequence
- ATGGAAAGTGCCAGTACTGGTCGCCGAAGGAACAACATGCGAGTCAATGCGGAGGATAATGCACTAGATCAAATAACGAAGGAGGCGGAAGCACGACTTGCAGCGCGTCGACAAGCTCGTGCCGAGGCCCGCGAGATTCGTATGCGAGAACTGGAGCGTCAACAGAAGGAGCTGGAATTAACGGCTGACCGGGTATTCGATATGCAAAGCACCACTGCAGGTGGCGCAGGTGGTGGCGATGCCCTCCTCTCGGCCCATCCCTCACGTCTCGTCTATGGCGGACTGATAAATGTGGCCCGTGCATCAGTGTCGCGGCGTAGCAGTGAGGACTCCTTGGAAGATGACGGCCGAAGTTTTCGTGACTTCAAGCATGAGCTTAAAGACGTTGAGGAACGGTTTCGGAAAGCGATGATAACGAATGCCCAGTTGGACAACGATCGTGCCTCCCAGGCATACGAAGTAAAACTGCTCAAGGACAAATGCGAAATTATGCAGGAATCGTTTGCCCAACTGCAGCGCGAATTCAAGGAGAAGATGCGCGACTGCAATGCCCTCAAGCGAAGCTTGGATCGCGCCAATCTCGAGCTGAAGTTAGTACAAGGACAGTTAAATGAGCGGGACTTGTTGATATCAGAGCAGGGCCTTCTGATTGTGGCTGTTGAGAATGAGGATGGCAGCGATGCCAAGCGGGCTCTGGTTAGTGTTGAGAACGCCAAACTCTTAGCCTCCGTTCAGGGTTCTTTAGATGTTAGACTTAAGAAATTCAGTGACGAAAAACAGCGACTGCTATCCGAAGTGCACAGTCTTCACGAACAGCTTGATGCCTACAAAAGTGAGGGAGTGGCTGGAGGATCTGGCAGCTTTGCACATGGTTCTTTTGGCGAAGACGATGATTACGAGGCTCAAACATCGGGAAATCCTGGAGAGATTGGAGGAAGCGGAGACGGCAAATAA
- Protein Sequence
- MESASTGRRRNNMRVNAEDNALDQITKEAEARLAARRQARAEAREIRMRELERQQKELELTADRVFDMQSTTAGGAGGGDALLSAHPSRLVYGGLINVARASVSRRSSEDSLEDDGRSFRDFKHELKDVEERFRKAMITNAQLDNDRASQAYEVKLLKDKCEIMQESFAQLQREFKEKMRDCNALKRSLDRANLELKLVQGQLNERDLLISEQGLLIVAVENEDGSDAKRALVSVENAKLLASVQGSLDVRLKKFSDEKQRLLSEVHSLHEQLDAYKSEGVAGGSGSFAHGSFGEDDDYEAQTSGNPGEIGGSGDGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336724;
- 90% Identity
- iTF_00569677;
- 80% Identity
- -