Dtei000502.1
Basic Information
- Insect
- Drosophila teissieri
- Gene Symbol
- -
- Assembly
- GCA_016746235.1
- Location
- CM028597.1:17855076-17858127[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 5.8e-06 0.0005 20.2 2.3 1 23 204 227 204 227 0.97 2 13 0.0003 0.026 14.8 0.1 1 23 234 256 234 256 0.97 3 13 0.16 14 6.3 0.1 2 23 288 309 287 309 0.94 4 13 5.5e-05 0.0048 17.1 2.1 1 23 399 422 399 422 0.97 5 13 0.18 16 6.1 0.6 1 19 429 447 429 450 0.93 6 13 0.05 4.4 7.8 6.4 1 23 459 481 459 481 0.95 7 13 1.6e-05 0.0014 18.8 0.7 1 23 488 511 488 511 0.97 8 13 0.00029 0.025 14.9 2.4 2 23 519 540 518 540 0.96 9 13 0.013 1.2 9.6 0.1 2 21 567 586 566 587 0.94 10 13 0.006 0.52 10.7 2.6 1 23 636 659 636 659 0.98 11 13 0.12 10 6.6 0.4 1 23 696 719 696 719 0.92 12 13 9.5e-05 0.0082 16.4 1.6 2 23 752 774 751 774 0.95 13 13 0.0052 0.45 10.9 0.0 1 22 788 809 788 809 0.93
Sequence Information
- Coding Sequence
- ATGAAGCTGCCGGTGATTTGTCGCACGTGCGACTCCACGGACACCGACAACCTTCTGAAGCTGGCCACGCCCTCGAAAAAGTATCCGGACAAGTTGCTTTCGGAGATTTTGTGCGAGCTAACCGAAATCAATCTGGATGCTACTGGCAGTCAGAAACTTCCGCAATGCTTGTGCAGCGGATGCACCAAGAAATTAATGGGCGCCTATTGCTTTGTGAAGCAGGCGCTGGCCGCCAACGAACTTCTAATGAAGCATCTGAAGAACGGAGGTGCTCCATCGTCAACGGACTGCCTGCAGGAGGCGCCGATGGAGCTGTGTGCTGAGCAGCATGTGGAAGTCAAGCTGGAGACCGAGGATGAGGACTGTGGCGAAAACGATGTCACCATCACCTGCTCCGAGCTACCAGAACCGGACGAAATGGATATGGAGAGCAAAAAGTCCGTGGACCCTCTGACCATGATTGAGACTGTGAAACTGGAAATGGAGCCAAGGAGCGTTGAGAAACCAGCGGAAGACGATCCGTCATCGGACTTTGAAGACGAAGACTCCCTGGATAATCTGCCGCTGTTTAATCGCATTCAAAAGTGGAAAACAGGAAGGAAGTCTGTATATAAATGTCAGGACTGCCCCAGGAGCTTTAAACGATTCGACTTTTTGAAACGCCATGAAATGCGCATCCATAAGCCAGAAACCCGATTGTACGCCTGCTCACTTTGCATTCGCAAGTTCAGCCGCAGCGAAGCCCTCGAAGCGCACCTAAAAGTTCACCGGAACTCAAAACGATCGGCGAACATTAGCGAGCACAAGAAGGCAAAGGCCGTGGATTTAAATCTCTGCAAACCGCATGGCTACAAGCTTATTGAGTGCATGATTTGCCAGAGCCAGTACAACAAGATTGCTGATCTACGACGCCATTTGGAGGAGCACCCTGATATTGTCAGCCTGTGCGGTCGGCCAAATATGGAGCCCCATGAGCTGGCGGAGCTGTTTTATCCCGATTCCAAGGACCTCAATGAGGAACAGTTAATCAACATGATTCGCAAGGACCTGGCGGCGGGTATCTATCAGCGTTTCTATTCGATAACGAACCAAAGTGGCTACGAAATGGATCTGGACAGCTCGGAGACCGACAGCGATATGGACGGAGATCCCGATGACCAGCAAAAGAGACGAAGAAAGTCGCGCAAAGCCACCTACAGCTGCGAACTGTGCCAGCAAAAGTTCCCGCGAAAATATCAGCTTTATGACCACCAGCGACAGAGCCACAGTTGGTCAGACGCCCCTCATGTTTGCGGACGATGTGATGGACGTTTTGTTAGTCTGCAGCTGCTACGGCACCACAACGAGTCGCAGTGTAGGAATGCTCAAAAACGATTTCTCTGTCACAAATGTCCGCTGCGCTTCCGCTGGAAACACAACCTGAAAACGCACTTCCGCGAACACAGGATAACAAATCAAACCTTTGAATGTTCCGAGTGCAAACGGGTCTTTGACAAAAAGAAATCCCTCACCGTTCACCTGCTTAGCGTACATGCAGAGGAATCAAAGCTAATTCCCTGCCAGTGGTGCAGTCGCAAATTCTATCGGCACGACTACTTGGTCAAACACCTGAAGCGCCACGGTTTGAAAGAGCAGGACATTCCCTTGGCAGAAACATTGATTGCTGCCACCTCTCGGCCAAACGGTGCAAAGCGCATTACCTGCCGCATGTGCAATCTGCATTTCGAGCGTATTGTTGATCTGCGTGCCCATATCCAGTTGGAGCTCAAGCTATCCCTGTCGCTACACCAGAGCTACGACTCCCCGCACAATTACTCCATAACAAACGAATCTGGCTTTGAGCTGCAGCTGGAGGATTCGGAAACCGAGGACGAGATGCAGCCCGGTGCTGGCAGCCGTCCCGTTTATATCTGCGAGTTGTGCAGCGTGCAGTGCAAGCGGAAGTTCGAAATGATCCAGCATCAGCGGACGATGCATCGCTTTGACAAAATGCCACACGAATGCGACGACTGCGTCTTTAAATGTGTCTCCAAGAGCATTATGGACCACCACCGGCAGGGCCAGTGTAGTAGTACCGAAAAGAAGCATCCATGCGGCAAGTGCTCCTACAAGTTTATGTGGCCAGAGAACCTAGAGCAGCATGTTCTTCTGCAACACAGCAAGTCTTCCGTCGGCAATGCGGCGGGCGTAAGACTCACGCCAGGGACCGGTGACCTGGAAAAGGATGCCACTGAGGACGGAGTGCCGCTGCTACAGTGTCCGCACTGCGATCGCACATACCAGATGAAGTCTCGCCTGAACAACCATATCCGCGATGTGCACATTAACGGTGACCGAAAGCGCAAGGAGGCTATCAAGCGCTTCCTCTGCTCCCTGTGCGGAATGGAGACGAGATCAGCTGCCGCCCTTGTCACTCATATGCGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGTTGATGCGGCGTCACTTCGACGAGGTGGAGACGTGGCTGAGGCGCCAAAAGTAA
- Protein Sequence
- MKLPVICRTCDSTDTDNLLKLATPSKKYPDKLLSEILCELTEINLDATGSQKLPQCLCSGCTKKLMGAYCFVKQALAANELLMKHLKNGGAPSSTDCLQEAPMELCAEQHVEVKLETEDEDCGENDVTITCSELPEPDEMDMESKKSVDPLTMIETVKLEMEPRSVEKPAEDDPSSDFEDEDSLDNLPLFNRIQKWKTGRKSVYKCQDCPRSFKRFDFLKRHEMRIHKPETRLYACSLCIRKFSRSEALEAHLKVHRNSKRSANISEHKKAKAVDLNLCKPHGYKLIECMICQSQYNKIADLRRHLEEHPDIVSLCGRPNMEPHELAELFYPDSKDLNEEQLINMIRKDLAAGIYQRFYSITNQSGYEMDLDSSETDSDMDGDPDDQQKRRRKSRKATYSCELCQQKFPRKYQLYDHQRQSHSWSDAPHVCGRCDGRFVSLQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRITNQTFECSECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLKEQDIPLAETLIAATSRPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSETEDEMQPGAGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCVFKCVSKSIMDHHRQGQCSSTEKKHPCGKCSYKFMWPENLEQHVLLQHSKSSVGNAAGVRLTPGTGDLEKDATEDGVPLLQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLMRRHFDEVETWLRRQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00581676;
- 90% Identity
- iTF_00604984;
- 80% Identity
- -