Basic Information

Insect: Drosophila tani
Gene Symbol: -
Assembly: GCA_008042535.1
Location: VNJO01007563.1:12582-15851[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.1e-06 9.5e-05 22.9 3.1 1 23 200 223 200 223 0.95

2 17 0.00052 0.045 14.5 0.2 1 23 230 252 230 252 0.97

3 17 0.21 18 6.3 0.1 2 23 284 305 283 305 0.94

4 17 5.2e-05 0.0045 17.6 2.3 1 23 393 416 393 416 0.97

5 17 0.25 22 6.1 0.6 1 19 423 441 423 444 0.93

6 17 0.068 5.9 7.8 6.4 1 23 453 475 453 475 0.95

7 17 7e-06 0.00061 20.4 0.4 1 23 482 505 482 505 0.97

8 17 0.00039 0.034 14.9 2.4 2 23 513 534 512 534 0.96

9 17 0.018 1.6 9.6 0.1 2 21 561 580 560 581 0.94

10 17 0.0081 0.7 10.7 2.6 1 23 630 653 630 653 0.98

11 17 0.014 1.2 10.0 0.4 1 23 690 713 690 713 0.96

12 17 0.00013 0.011 16.4 1.6 2 23 746 768 745 768 0.95

13 17 0.0028 0.24 12.2 0.1 1 23 782 804 782 804 0.95

14 17 1.8e-05 0.0016 19.1 1.0 1 23 810 832 810 832 0.99

15 17 3.3e-07 2.9e-05 24.6 2.6 1 23 838 860 838 860 0.98

16 17 3.7e-05 0.0032 18.1 3.8 1 23 866 888 866 888 0.97

17 17 2.6e-05 0.0022 18.6 0.5 1 22 894 915 894 918 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.1e-06	9.5e-05	22.9	3.1	1	23	200	223	200	223	0.95
2	17	0.00052	0.045	14.5	0.2	1	23	230	252	230	252	0.97
3	17	0.21	18	6.3	0.1	2	23	284	305	283	305	0.94
4	17	5.2e-05	0.0045	17.6	2.3	1	23	393	416	393	416	0.97
5	17	0.25	22	6.1	0.6	1	19	423	441	423	444	0.93
6	17	0.068	5.9	7.8	6.4	1	23	453	475	453	475	0.95
7	17	7e-06	0.00061	20.4	0.4	1	23	482	505	482	505	0.97
8	17	0.00039	0.034	14.9	2.4	2	23	513	534	512	534	0.96
9	17	0.018	1.6	9.6	0.1	2	21	561	580	560	581	0.94
10	17	0.0081	0.7	10.7	2.6	1	23	630	653	630	653	0.98
11	17	0.014	1.2	10.0	0.4	1	23	690	713	690	713	0.96
12	17	0.00013	0.011	16.4	1.6	2	23	746	768	745	768	0.95
13	17	0.0028	0.24	12.2	0.1	1	23	782	804	782	804	0.95
14	17	1.8e-05	0.0016	19.1	1.0	1	23	810	832	810	832	0.99
15	17	3.3e-07	2.9e-05	24.6	2.6	1	23	838	860	838	860	0.98
16	17	3.7e-05	0.0032	18.1	3.8	1	23	866	888	866	888	0.97
17	17	2.6e-05	0.0022	18.6	0.5	1	22	894	915	894	918	0.90

Sequence Information

Coding Sequence: ATGAAGCTGCCGGTAATTTGTCGCACCTGCGACTCCACGGACACCGACAACCTTCTGAAGCTGGCCACGCCCTCGAAAAAGTATCCGGACAAGCTGTTCTCGGATATTTTGGCGGAGCTCACCGATatcaatGTGGATGCTAGTGCCAGTCAAAAGCTGCCGCAGTGCTtgtgcagcagctgcatcaAGAAACTAATGGCTGCCTATTGCTTCGTTAAGCAGGCGCTGGCCGCCAACGCACTGCTGATGAAGCACTTGAAGAACGCCGCCACCGACTGTCTGCAGGAGGCGCCCATGGAGCTGTGTGCGGAGCAGCATGTGGAGGTCAAGATGGAGacggaggacgaggagggTGGCGACAACGATGTGAGCATAACCTGCTCCGAGCTgccagaaccgggcgcaggggATGTGGAGAGCAAGAAGTCTGTGGATCCACTGACCATGATTGAGACGGTGAAGCTGGAGGGGGAACCTCGAAGCGTGGAGAGGCCGGCGGAAGAAGAGCCAGTCACGGACTTTGAGGATGAAGACTCCCTGGATAACCTGCCCCTGAACAAGCGCATCCAGAAGTGGAAGGCCCGGAGGATGTCCGTTTTCAAGTGCCACGACTGCCCGAGGAGTTTCAAGCGAAACGAGTACCTAAAACGCCACGAAATCAGGGTGCACAAACCGGAGACCCACTGGTTCGCCTGCTCCCTCTGCATTCGCAAGTTCAGCCGCAGCGAGGCCCTCGAGGCACACCTGAAGGTCCACCGGAACTCCAAGCGATCGGCCAACATCAGCGAGCACAAGAAGGCCAAGGCGGTGGATGTGAATCTCTGCAAGCCGCACGGCTACAAGCTCATCGAGTGCATGATCTGCCAGAGTCAGTACAACAAGATTGCGGATCTCCGACGACACTTGGAGGAGCATCCAGATATTGTTAACCTGGGCCCGCGTCCAAATCTGGAGCCAAGTGAGCTGGCAGAACTCTTTTATCCCGATTCCAAGGACCTGGGCGAAGAGCAGTTGCTCGGCTTAATCCGCAAGGACTTGGCGTCGGGCATTTACCAGCGTTTCTACTCGATAACCAACCAGAGTGGCTACGAAATGGACCTGGACAGCTCGGAGACGGAAAGCGATGTGGACGCTGAGCACGAAGATCAGCAGAACACGAGGCGGCGCAAGAGCCGCTACACATGCGAGCTCTGCCAGCAAAAGTTTCCGCGGAAATATCAGCTCTACGATCATCAGCGGCAGAGCCACAGCTGGTCAGAGGCGCCACATGTCTGCGGGCGTTGCGATGGACGCTTTGTCAGCCTGCAGCTGCTAAGGCATCACAACGAGTCGCAGTGCCGGAATGCACAGAAGCGCTTCCTCTGCCACAAATGCCCGCTGCGCTTCCGGTGGAAACACAATTTGAAAACGCATTTCCGAGAGCATAGGATCATGAACCAAACCTTCGAGTGTCCCGAGTGCAAGCGggtttttgacaaaaagaaaTCCCTCACCGTTCACCTGCTCAGCGTCCATGCGGAGGAATCAAAGCTGATACCCTGCCAGTGGTGCAGTCGCAAGTTCTACCGCCATGACTACCTAGTGAAGCATCTAAAGCGCCATGGGCTCAAAGAGCAGGACATTCCCCTGGCTGAGACTTTAATAGCGGCCACCTCGCGGCCCAATGGAGCCAAGAGAATCACCTGCCGCATGTGTAACCTGCACTTCGAGCGAATTGTAGATCTGCGAGCCCACAtccagctggagctgaagctctCCTTGTCGCTACACCAGAGCTACGACTCGCCACACAATTATTCAATCACCAACGAGTCCGGCTTTGAGTTGCAGCTGGAGGATTCAGAGACGGAGGATGAGTTGCAGGCGAGTGGCGGAAGTCGGCACGTTTACATCTGCGAGCTGTGCAGCGTGCAGTGCAAGCGGAAATTCGAGATGATCCAGCACCAGCGGACGATGCATCGGTTTGACAAGATGCCGCACGAGTGCGATGACTGCATCTTCAAGTGTGTGTCCAAGAGCATCATGGACCACCATCGCCTGGGGCAGTGCAGCAGCAAGGAGAAGCTGTACTCCTGCGGCAAGTGCTCCTACAAATTCATGTGGCCCGAGAACCTAGAGCAGCATGTGCGGCTCCAGCACAGCGAAGCTGCCTCCAACAATCCCACAGACGGCAGGCGAGCGACTGCAACCGGTGACCTGGATAAGGAGGCAGGGGAAGATGGAGTTCCCCTGTTGCAGTGTCCCCATTGCGATCGCACCTACCAGATGAAGTCCCGCCTGAATAACCACATCCGGGACGTGCATGTAAACGGGGATCGTAAGCGCAAAGAGGCCATCAAGCGTTTCCTGTGCTCCCTGTGCGGCATGGAGACCCGATCTGCCGCCGCCCTGGTTACCCACACCCGTCGTCACACTGGGGAGAAGCCCTTCAAGTGCGATCTGTGCGAGATGGCCTTTCCCAGGCACTCGGAGCTGGCCTCACACCGCCGGATGCACACCGGCGAGAAGCCATTCCATTGCACTGTCTGCGGCAAGGACTTTGCCCGCTCCGACAAGCTCAAGCGCCACATGCTCACCCACAGCGGTTTGAAGCCGCACAAGTGCACGTACTGCGAGAAGAGCTATCGCCAGGCCAAGGATCTCAAGCtccacctgcagcagcacacCGGCGAGTGTCCCTTCGTGTGTGGGACCTGTGGCGAGCGTTTTATACAGAGCAGCACGCTGGAGAAGCACCGCTTGATGCGACGCCACTTTGACGAGGTGGAAGCCTGGCTAAGGCGGCAAAAATAG
Protein Sequence: MKLPVICRTCDSTDTDNLLKLATPSKKYPDKLFSDILAELTDINVDASASQKLPQCLCSSCIKKLMAAYCFVKQALAANALLMKHLKNAATDCLQEAPMELCAEQHVEVKMETEDEEGGDNDVSITCSELPEPGAGDVESKKSVDPLTMIETVKLEGEPRSVERPAEEEPVTDFEDEDSLDNLPLNKRIQKWKARRMSVFKCHDCPRSFKRNEYLKRHEIRVHKPETHWFACSLCIRKFSRSEALEAHLKVHRNSKRSANISEHKKAKAVDVNLCKPHGYKLIECMICQSQYNKIADLRRHLEEHPDIVNLGPRPNLEPSELAELFYPDSKDLGEEQLLGLIRKDLASGIYQRFYSITNQSGYEMDLDSSETESDVDAEHEDQQNTRRRKSRYTCELCQQKFPRKYQLYDHQRQSHSWSEAPHVCGRCDGRFVSLQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRIMNQTFECPECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLKEQDIPLAETLIAATSRPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSETEDELQASGGSRHVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHRLGQCSSKEKLYSCGKCSYKFMWPENLEQHVRLQHSEAASNNPTDGRRATATGDLDKEAGEDGVPLLQCPHCDRTYQMKSRLNNHIRDVHVNGDRKRKEAIKRFLCSLCGMETRSAAALVTHTRRHTGEKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRHFDEVEAWLRRQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00581676;
90% Identity: iTF_00531787;
80% Identity: -