Basic Information

Gene Symbol
hang
Assembly
GCA_018150745.1
Location
JAECWP010000138.1:3861285-3873773[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.25 19 6.0 1.0 3 23 360 381 359 381 0.93
2 19 0.18 14 6.4 3.5 3 22 485 504 483 504 0.89
3 19 0.00054 0.04 14.4 3.3 1 22 599 620 599 622 0.90
4 19 0.062 4.6 7.9 0.1 2 21 634 653 633 654 0.93
5 19 0.00063 0.047 14.2 0.2 2 23 797 819 796 819 0.95
6 19 0.0018 0.13 12.7 0.1 1 23 827 850 827 850 0.96
7 19 1.5e-05 0.0011 19.3 0.1 2 23 937 958 936 958 0.97
8 19 0.00026 0.019 15.4 2.9 2 23 1058 1080 1057 1080 0.97
9 19 0.02 1.5 9.4 0.2 2 23 1089 1111 1088 1111 0.95
10 19 0.0004 0.029 14.8 0.2 1 23 1124 1147 1124 1147 0.97
11 19 0.00011 0.0084 16.5 1.1 1 23 1190 1212 1190 1212 0.99
12 19 0.0018 0.13 12.8 0.9 1 23 1220 1243 1220 1243 0.96
13 19 0.39 29 5.4 1.5 2 20 1251 1269 1251 1269 0.96
14 19 7.5e-05 0.0056 17.1 0.2 3 23 1368 1388 1367 1388 0.98
15 19 0.0046 0.34 11.5 0.1 1 23 1423 1445 1423 1445 0.97
16 19 0.00055 0.041 14.4 0.7 2 23 1526 1548 1525 1548 0.93
17 19 1.8 1.3e+02 3.3 0.1 2 20 1568 1586 1567 1588 0.91
18 19 0.0058 0.43 11.2 0.3 3 23 1603 1623 1603 1623 0.98
19 19 3.4e-05 0.0025 18.2 2.3 1 23 1716 1738 1716 1738 0.99

Sequence Information

Coding Sequence
ATGTGTGACACAGCGATAAATGAGCCGCTGACCACCAAAATATATAATTGCGTCAATATCAAGATAACATCACAGGATCGTTTATCACAACAGATATGTCATGCTTGCATTAGCTATCTGAATTCTTGGCAAAGTTTCAAAAATCGTTGCCTCAGCTCACAGTCCAAGCAGCGACAATGGCTGGAGACTACGACAGCGACGACATCGAGTAAAAGTAAACTTCTCAGCTATTTAGATTTGAATAGTGCTGAGAATGGAACTGGAGCAGGAGCTGGAATAGCAGGATCTGATCATCAATCCCAATCGCAGCGACATCATCAGCAGCAACCATATCGTAGATACCAACAGCAAAGAAGCAGGCACCAGTCACAATATCAATATACTCCCAGACGTTCACGTCAGCATCAAGGAAGGGGTGGCCCTGGCCTTAGTTCAAGTGGTCGTGCAGCTCCCTCTACCCAAGCTTCTGCAGGTGCTGTCGCAGGTCATCCCACCATGCGCAAACTGAAATCCAAAATGTATTTACCTTTAGATATAACAGTTCCAACACCCCCAATTGCTCTTCCTCCTCCTCCACCCCCACCTTTGCCCTCTGCTGCGACTGCTACTGCTAGTTCTGGTTTGTCACTTAGTAGTGTCCAGCCGTTACCACCGCCAAAGCCTCTGTCAATGCCAATGTCTATGGCGGCTACCACATCAATGTATTCGACAACAACGCTGGCACCGACACCGACGACACCGCTGCTTATGCCAGTGACGCTACAGAGCGCCACACAGCAATTGAGATTTTTCAGACGCTATTCCTATAATCCTCTTCCTGCTGTACCCATAAAAGATGAGCCTATAGACGATACCGATGATGACTATCAAATGAAGTCCATAGATGAGTCTATAGATGATATGGTCGATCCCACAATGTTCCTAGAGCGTTCAGAGCTTGAAGGCGATGTGCCATTGATGACTTCGGACTATGATTACACGGCTCAGCATGGTGTGACAGCGGCTGTGGCGGCAGCCTCGCTACCAGCTAGCGCTGTGGCTAATGTGGCCGCTGCTGGCGACTCTAAAGTGGCCAGTTGTCGGGCATGTAGCCTTCAGTTTTCCACACGAGCCAATGCTCGACGGCATGAACGTAATCTGCATCCGAATCTCTTTCAATTGTCCACCGATTCGCCCAACAATACGCCAGTTACAAAGCCCACACCGGCCCTGGCCGTCGCCTTGGAACTCCAGCGGGCCGCTGCTGCAGCAGCCACAGCTGAGGCAAGTCGTTCCTGTGGGAATATGTCAACGCAAAAGTATCGTCAGGTGGTTATGAATGCCTTTATCAAATGTGAAGCCGGCGGCTATGACTATGGCAATCCGGAACAATATCAAGCCTTGCTGAGTCGCGATAAAATTGAGTTTATCGAACAGAATGCTGAATTCCTTGAGCAATATCAGACAATGACCTGTCGCTGTTGCAACAAGTTCTTCAGCACTTACAAGAATTTCATGGCCCATGTGCGAAAGAAGTACCCATCGTTGCCGCGAAATCTCTGTTTCAATTGCCTTAAGATGAACGATTCAAAGGCTTTGTTTATTTCGCATCTGAAAAAGCGCAACTGCATCAATCTATACAGAGTTATGAATGCCATCAATAGTAAGCAAAACGATGAAGTTGGTCCTTCGCCTGCTGTCCCTGTTATTCCAGCGGCTGTGACTGTTGTTTCGGGGTCGAGTGCAAGTGGAACAACGACGACGTCAGATCGACCAGAGAAGCTGCGGGCCAAAGAACTTCTGGTCAACAAGCTCTACGAATGTAAACTCTGTCCAAAGGGTTTCCGCACCAAGCATGAGTTCCGTACTCATGTCTATGATAAGCATGCGGATGTCCAGCGGAAGGATAACAATTCCATTCAGTGCAGTTTCTGTGGCCTGGACTTTGCCGATCCTGTGGACAGGCGGCGTCACTACAACAACATGGACTGCATAGTCCGGTTGCGATGCATGACCTGCGATGCCAAATTGGAGACGCATCAGCGGTTCCTCGATCATGTCTATCAGGATCATTTGGGCGGCTTAAGCAGTGATAATGTCTCATCGACGACTGTGATTGGTGGTACAACCACCAACGTAGATAATTCACATTCACCTGGCAAGAAGAGTCTGCTTGGTGCATTGGGCATAGGATCGGCAGATGAATCTCGTAGTGCTGGTAGCGCTGCCAATGCTGCGCCGTCTCTGATTACATCCACACCAAAGCCAGCTGCAGGAGGAGGATCAGCAGCTACTGCTGCTTCCACAACCACGGCTAGTGGTGGTTTATTAGGTGGTGGTGCTGTGGCGGTGGCTAATCGTGATCGTGATGGAGCTCCAAAATCTCAATATTTCTCCCGCATGCCCCAGGTCTGTCCCATTTGTGGCCAGCAATATAACAACTACAACAATGTGCTACGTCACATGGAGTCAAAGCATCCGAATAAATTACCGGAGACCTACAAATGTGTACGATGCGGCTTGGGCTATCCACGAATCTCGTATCTGCGGGAACACATGATCAATGTCCATGGCGTTGATAAAAATCGCCATTCCGGCGGATTCGAGTATATAGTTAATGCGGATGCCGTTAAATTGGCCGATGGCAGTACTCCGAATGTCTATACAGGACGATATGATTATGTGATGAAGGATCTGATGTCGATAACAAATGGTGGGACCCTCGATGATGATGACGAGGAGACAACTGGCAGCGTGGCCAAAAAGATACGACTGGATGATAGCAGCAATAACAGCAGTCTCATGGGTATGGCCGCAACACAGCAAAAGGAGTGCCCCATCTGCAATGCAGTATTCAGCAACAACATTGGTTTATCCAATCATATGCGTTCACATTACACAGCCTCAGCGAATGCCTCTGCATCAGCAAATGCTTCTGCCTCGACTTCCGCCTCGTCCAGCACGAATGCTGCTTTGGCTGCAGCCAATCGCATGACACCCAAATCGTTGACCATAACAGCGGCTCCTCCGATCTCAGCGGAGGCAGCTGCAACACCAACCAAAAGCAAAACAACAATAATTACAGGGGAATCAAACTCGCATGCCTCTTCTTCATCGGCGGCACCTCAAGTACAGGCAATACAATTCCGTCGGAGCTTGGATCAGGCAGCCGATCGACGGTTCCGGCGTATGCGTTGCCGCATTTGCCAGCGACGCTTTAGCTCCAAGAAATCCTATCGTTATCACATGCTCACCGATCATCAAGTGCAAAACGTTCAGTTTATCAAGTGCAAGCTTTGTAATGCTGAATTCGCTTACGAGAAGGGGCTGAAAGTGCATCTGTTTAAGGTGCACGGCAAGGCCATTAAAGATGAGATGATAATCAAGCAATTTGAATGTGAGATTTGCTCCATTGTCTACAGCTCGGAGATGGAACTGCAGCAGCATAAGCGAAGTGTTCATGAGTTGGCGACAGCTTCATCATCGACAGGAACAACAACAGGATCGGTAGCAACATCAAGTGGAACAACAACAACACCGGGATTAGGCGCAAATAATGTTAGTTCCATCCCCGCTCCACTCTATTGGTATCAATGCAAATATTGTCCATCAAATTTCAATACCAACAAGAAGTTGGCCATTCACATCAACTCCCACGATGAATTCGATTCCAATGATTATTCGTGCAAGGATTGCGGCAATGTCTACAGCGGCAGAAAAAGTCTCTGGGTGCATCGGTATAAGAAGCATCCACAAGTGCCCGATCCGGCCGAGTGTTGCTTGTGTCGCAAAGTATTTTTCGATCGACAAATGCTGGACAATCATATGCCCACTTGCAATCGGAAGCCTATAACCTCCACAGGTGCACATCAACAGCCGCAACAGCAGCACCACCACCACCAGCAGGATCAGCTAAGACGCGGTCTGCTTGTGTTTAAGCACAAAACTGGCGACGATGATGAGGAAGAGGAAGAAGATGACCAACTTCAACAGCAATCGCATCTTCAATTGGATGATACAACGGATGAGGCCCCTGATCTGGCGCATACATCTGCGCCCACTGCTGCTTCCTCCTCGTCGGCGGCAGTGGCTCATGTCAAAATACGCATACCTGAAGTAGCTTGCACCATTTGTGGCGCACGATTTATCGATCAGGAAATGTTTACCAAGCACATACAAAAGCATGAACAGGAATTGTATGTAGATAATCCACTAGCGGCCATGTTCGATGATAGTCCAGCCGATCCCGGACAATTTCAAGTGGAACGACAGAACGAGAATGGGGAATATGCATGCGATTTGTGTGCCAAAACATTCCCCCAAGTGATTGCACTTAAGGTGCATCGCAAATGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACAGTTGAACAACATCAACAACAACAACAACAATTTGATGTTGCATCTACGCGAACTGCATGCTGTGGGTCTGGTGCCCAATCAACAGCAACAACAACTGAACTCCAGCCACAACCAGCAGCAGAGCCACAACTCATCCGCAACTTCAACGATGGCAACAGCAGCAAGCAAATCGCTGAAACGGAAACGTGAATTGAAATGCGATTATTGCGCCTCCACCTTCATCAGCAATAACAATCTGCGTCGTCACATGTATGAACTGCATAAACATGAGGTTAGCCACTTACCCGAACCACCGGTAATTGTGGTGGATGAGCTGCTCTCGTGCCGCCGTTGTGATCTTCAATTTGAAACCAAAGAATTGTGGATTGAGCATAAATTGGCAGATGCGAAAGTGGTGCGTCCGTTTTGCCCCTTTCAATGGGGATGTGATCTATGTGGCGAGTATTTGTCACGCAAAGAGAAACTCATCAATCATATTAATAATCACCTCAAGGAGGATGTTATAGTCCCCGTAGCAGAGAAGATAACTACATCAGTCACATCTAATGCAACATCAACGCCCATAGCAACAAACGCAACAGAAACTTTGAAAATTGCCACAGCCACATCGACAACATCATCATCGGAGAGTGAATCATTGACAACAAATACTACATCACATTCAATGGGTGAGCGGCGTAAAAACAAAGCAAGAGCAACAGCAGCGGCGGCGACAATAACTGACGCTGCTGATGCTGATGCTGATCAGTCTGATAATTCCAGCTATACGTGTGATCTATGTCAACTTTGTTTTGATTCTCAGGAGCAACTGCAGAGCCACATCAAAAGCCATTTTCTGAATGGACCAAAAATGTCAACGACAACGGGTCTAAAAATGGTGACAGCGGCAGCGACAGCAGCAGCGACGGCGGTGAGCACTTCTTCTAACATCATAAACAACAACAATAAAACCAAAATTACAACAACAAAATCTTCGTCAGTGAAGACCACTAATTGA
Protein Sequence
MCDTAINEPLTTKIYNCVNIKITSQDRLSQQICHACISYLNSWQSFKNRCLSSQSKQRQWLETTTATTSSKSKLLSYLDLNSAENGTGAGAGIAGSDHQSQSQRHHQQQPYRRYQQQRSRHQSQYQYTPRRSRQHQGRGGPGLSSSGRAAPSTQASAGAVAGHPTMRKLKSKMYLPLDITVPTPPIALPPPPPPPLPSAATATASSGLSLSSVQPLPPPKPLSMPMSMAATTSMYSTTTLAPTPTTPLLMPVTLQSATQQLRFFRRYSYNPLPAVPIKDEPIDDTDDDYQMKSIDESIDDMVDPTMFLERSELEGDVPLMTSDYDYTAQHGVTAAVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPVTKPTPALAVALELQRAAAAAATAEASRSCGNMSTQKYRQVVMNAFIKCEAGGYDYGNPEQYQALLSRDKIEFIEQNAEFLEQYQTMTCRCCNKFFSTYKNFMAHVRKKYPSLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVMNAINSKQNDEVGPSPAVPVIPAAVTVVSGSSASGTTTTSDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGLSSDNVSSTTVIGGTTTNVDNSHSPGKKSLLGALGIGSADESRSAGSAANAAPSLITSTPKPAAGGGSAATAASTTTASGGLLGGGAVAVANRDRDGAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEETTGSVAKKIRLDDSSNNSSLMGMAATQQKECPICNAVFSNNIGLSNHMRSHYTASANASASANASASTSASSSTNAALAAANRMTPKSLTITAAPPISAEAAATPTKSKTTIITGESNSHASSSSAAPQVQAIQFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGKAIKDEMIIKQFECEICSIVYSSEMELQQHKRSVHELATASSSTGTTTGSVATSSGTTTTPGLGANNVSSIPAPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECCLCRKVFFDRQMLDNHMPTCNRKPITSTGAHQQPQQQHHHHQQDQLRRGLLVFKHKTGDDDEEEEEDDQLQQQSHLQLDDTTDEAPDLAHTSAPTAASSSSAAVAHVKIRIPEVACTICGARFIDQEMFTKHIQKHEQELYVDNPLAAMFDDSPADPGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLNNINNNNNNLMLHLRELHAVGLVPNQQQQQLNSSHNQQQSHNSSATSTMATAASKSLKRKRELKCDYCASTFISNNNLRRHMYELHKHEVSHLPEPPVIVVDELLSCRRCDLQFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVAEKITTSVTSNATSTPIATNATETLKIATATSTTSSSESESLTTNTTSHSMGERRKNKARATAAAATITDAADADADQSDNSSYTCDLCQLCFDSQEQLQSHIKSHFLNGPKMSTTTGLKMVTAAATAAATAVSTSSNIINNNNKTKITTTKSSSVKTTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00523881;
90% Identity
iTF_00555248;
80% Identity
-