Dneb006193.1
Basic Information
- Insect
- Drosophila nebulosa
- Gene Symbol
- hang
- Assembly
- GCA_018150735.1
- Location
- JAECWO010000003.1:5173876-5187591[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.31 23 5.7 1.0 3 23 437 458 436 458 0.93 2 19 0.23 17 6.2 3.5 3 22 562 581 560 581 0.89 3 19 0.00067 0.049 14.1 3.3 1 22 676 697 676 699 0.90 4 19 0.077 5.6 7.6 0.1 2 21 711 730 710 731 0.93 5 19 0.00078 0.056 13.9 0.2 2 23 874 896 873 896 0.95 6 19 0.0022 0.16 12.5 0.1 1 23 904 927 904 927 0.96 7 19 1.8e-05 0.0013 19.1 0.1 2 23 1014 1035 1013 1035 0.97 8 19 0.00032 0.023 15.1 2.9 2 23 1135 1157 1134 1157 0.97 9 19 0.025 1.8 9.2 0.2 2 23 1166 1188 1165 1188 0.95 10 19 0.00049 0.036 14.6 0.2 1 23 1201 1224 1201 1224 0.97 11 19 0.00014 0.01 16.3 1.1 1 23 1267 1289 1267 1289 0.99 12 19 0.0022 0.16 12.5 0.9 1 23 1297 1320 1297 1320 0.96 13 19 0.48 35 5.1 1.5 2 20 1328 1346 1328 1346 0.96 14 19 9.3e-05 0.0068 16.8 0.2 3 23 1445 1465 1444 1465 0.98 15 19 0.0056 0.41 11.2 0.1 1 23 1500 1522 1500 1522 0.97 16 19 0.00068 0.049 14.1 0.7 2 23 1603 1625 1602 1625 0.93 17 19 2.2 1.6e+02 3.1 0.1 2 20 1645 1663 1644 1665 0.91 18 19 0.0072 0.52 10.9 0.3 3 23 1680 1700 1680 1700 0.98 19 19 4.2e-05 0.0031 17.9 2.3 1 23 2065 2087 2065 2087 0.99
Sequence Information
- Coding Sequence
- ATGTGTGACACAGCGATAAATGTAAATTCTACAACAACAATAACAACAGGAGCAACACCTAGTGCATCTGGAACTAATTTACCAGCAGCTACAATTCTAACTACAGCTACAGCAGCGGCAGCGGCTACGGTTGGCGGCGGCACTGCTTCAAAAAAAGAAGCACAACAACGTTCGCCACAAAATTGTTGTCGTCTTTGCATTGCTCCGGCCACAGAATGTATTTCAATCATCAATAGCTATGCAGCCGATAAGGAGCCGCTGACCACCAAAATATATAATTGCGTCAATATCAAGATAACATCACAGGATCGTTTATCACAACAGATATGTCATGCTTGCATTAGCTATCTGAATTCTTGGCAAAGTTTCAAAAATCGTTGCCTCAGCTCACAGTCCAAGCAGCGACAATGGCTGGAGACTACGACAGCGACGACATCGAGTAAAAGTAAACTTCTCAGCTATTTAGATTTGAATAGTGCTGAGAATGGAACTGGAGCAGGAGCTGGAATAGCAGGATCTGATCATCAATCCCAATCGCAGCGACATCATCAGCAGCAACCATATCGTAGATACCAACAGCAAAGAAGCAGGCACCAGTCACAATATCAATATACTCCCAGACGTTCACGTCAGCATCAAGGAAGGGGTGGCCCTGGCCTTAGTTCAAGTGGTCGTGCAGCTCCCTCTACCCAAGCTTCTGCAGGTGCTGTCGCAGGTCATCCCACCATGCGCAAACTGAAATCCAAAATGTATTTACCTTTAGATATAACAGTTCCAACACCCCCAATTGCTCTTCCTCCTCCTCCACCCCCACCTTTGCCCTCTGCTGCGACTGCTACTGCTAGTTCTGGTTTGTCACTTAGTAGTGTCCAGCCGTTACCACCGCCAAAGCCTCTGTCAATGCCAATGTCTATGGCGGCTACCACATCAATGTATTCGACAACAACGCTGGCACCGACACCGACGACACCGCTGCTTATGCCAGTGACGCTACAGAGCGCCACACAGCAATTGAGATTTTTCAGACGCTATTCCTATAATCCTCTTCCTGCTGTACCCATAAAAGATGAGCCTATAGACGATACCGATGATGACTATCAAATGAAGTCCATAGATGAGTCTATAGATGATATGGTCGATCCCACAATGTTCCTAGAGCGTTCAGAGCTTGAAGGCGATGTGCCATTGATGACTTCGGACTATGATTACACGGCTCAGCATGGTGTGACAGCGGCTGTGGCGGCAGCCTCGCTACCAGCTAGCGCTGTGGCTAATGTGGCCGCTGCTGGCGACTCTAAAGTGGCCAGTTGTCGGGCATGTAGCCTTCAGTTTTCCACACGAGCCAATGCTCGACGGCATGAACGTAATCTGCATCCGAATCTCTTTCAATTGTCCACCGATTCGCCCAACAATACGCCAGTTACAAAGCCCACACCGGCCCTGGCCGTCGCCTTGGAACTCCAGCGGGCCGCTGCTGCAGCAGCCACAGCTGAGGCAAGTCGTTCCTGTGGGAATATGTCAACGCAAAAGTATCGTCAGGTGGTTATGAATGCCTTTATCAAATGTGAAGCCGGCGGCTATGACTATGGCAATCCGGAACAATATCAAGCCTTGCTGAGTCGCGATAAAATTGAGTTTATCGAACAGAATGCTGAATTCCTTGAGCAATATCAGACAATGACCTGTCGCTGTTGCAACAAGTTCTTCAGCACTTACAAGAATTTCATGGCCCATGTGCGAAAGAAGTACCCATCGTTGCCGCGAAATCTCTGTTTCAATTGCCTTAAGATGAACGATTCAAAGGCTTTGTTTATTTCGCATCTGAAAAAGCGCAACTGCATCAATCTATACAGAGTTATGAATGCCATCAATAGTAAGCAAAACGATGAAGTTGGTCCTTCGCCTGCTGTCCCTGTTATTCCAGCGGCTGTGACTGTTGTTTCGGGGTCGAGTGCAAGTGGAACAACGACGACGTCAGATCGACCAGAGAAGCTGCGGGCCAAAGAACTTCTGGTCAACAAGCTCTACGAATGTAAACTCTGTCCAAAGGGTTTCCGCACCAAGCATGAGTTCCGTACTCATGTCTATGATAAGCATGCGGATGTCCAGCGGAAGGATAACAATTCCATTCAGTGCAGTTTCTGTGGCCTGGACTTTGCCGATCCTGTGGACAGGCGGCGTCACTACAACAACATGGACTGCATAGTCCGGTTGCGATGCATGACCTGCGATGCCAAATTGGAGACGCATCAGCGGTTCCTCGATCATGTCTATCAGGATCATTTGGGCGGCTTAAGCAGTGATAATGTCTCATCGACGACTGTGATTGGTGGTACAACCACCAACGTAGATAATTCACATTCACCTGGCAAGAAGAGTCTGCTTGGTGCATTGGGCATAGGATCGGCAGATGAATCTCGTAGTGCTGGTAGCGCTGCCAATGCTGCGCCGTCTCTGATTACATCCACACCAAAGCCAGCTGCAGGAGGAGGATCAGCAGCTACTGCTGCTTCCACAACCACGGCTAGTGGTGGTTTATTAGGTGGTGGTGCTGTGGCGGTGGCTAATCGTGATCGTGATGGAGCTCCAAAATCTCAATATTTCTCCCGCATGCCCCAGGTCTGTCCCATTTGTGGCCAGCAATATAACAACTACAACAATGTGCTACGTCACATGGAGTCAAAGCATCCGAATAAATTACCGGAGACCTACAAATGTGTACGATGCGGCTTGGGCTATCCACGAATCTCGTATCTGCGGGAACACATGATCAATGTCCATGGCGTTGATAAAAATCGCCATTCCGGCGGATTCGAGTATATAGTTAATGCGGATGCCGTTAAATTGGCCGATGGCAGTACTCCGAATGTCTATACAGGACGATATGATTATGTGATGAAGGATCTGATGTCGATAACAAATGGTGGGACCCTCGATGATGATGACGAGGAGACAACTGGCAGCGTGGCCAAAAAGATACGACTGGATGATAGCAGCAATAACAGCAGTCTCATGGGTATGGCCGCAACACAGCAAAAGGAGTGCCCCATCTGCAATGCAGTATTCAGCAACAACATTGGTTTATCCAATCATATGCGTTCACATTACACAGCCTCAGCGAATGCCTCTGCATCAGCAAATGCTTCTGCCTCGACTTCCGCCTCGTCCAGCACGAATGCTGCTTTGGCTGCAGCCAATCGCATGACACCCAAATCGTTGACCATAACAGCGGCTCCTCCGATCTCAGCGGAGGCAGCTGCAACACCAACCAAAAGCAAAACAACAATAATTACAGGGGAATCAAACTCGCATGCCTCTTCTTCATCGGCGGCACCTCAAGTACAGGCAATACAATTCCGTCGGAGCTTGGATCAGGCAGCCGATCGACGGTTCCGGCGTATGCGTTGCCGCATTTGCCAGCGACGCTTTAGCTCCAAGAAATCCTATCGTTATCACATGCTCACCGATCATCAAGTGCAAAACGTTCAGTTTATCAAGTGCAAGCTTTGTAATGCTGAATTCGCTTACGAGAAGGGGCTGAAAGTGCATCTGTTTAAGGTGCACGGCAAGGCCATTAAAGATGAGATGATAATCAAGCAATTTGAATGTGAGATTTGCTCCATTGTCTACAGCTCGGAGATGGAACTGCAGCAGCATAAGCGAAGTGTTCATGAGTTGGCGACAGCTTCATCATCGACAGGAACAACAACAGGATCGGTAGCAACATCAAGTGGAACAACAACAACACCGGGATTAGGCGCAAATAATGTTAGTTCCATCCCCGCTCCACTCTATTGGTATCAATGCAAATATTGTCCATCAAATTTCAATACCAACAAGAAGTTGGCCATTCACATCAACTCCCACGATGAATTCGATTCCAATGATTATTCGTGCAAGGATTGCGGCAATGTCTACAGCGGCAGAAAAAGTCTCTGGGTGCATCGGTATAAGAAGCATCCACAAGTGCCCGATCCGGCCGAGTGTTGCTTGTGCCGCAAAGTATTTTTCGATCGACAAATGCTGGACAATCATATGCCCACTTGCAATCGGAAGCCTATAACCTCCACAGGTGCACATCAACAGCCGCAACAGCAGCACCACCACCACCAGCAGGATCAGCTAAGACGCGGTCTGCTTGTGTTTAAGCACAAAACTGGCGACGATGATGAGGAAGAGGAAGAAGATGACCAACTTCAACAGCAATCGCATCTTCAATTGGATGATACAACGGATGAGGCCCCTGATCTGGCGCATACATCTGCGCCCACTGCTGCTTCCTCCTCGTCGGCGGCAGTGGCTCATGTCAAAATACGCATACCTGAAGTAGCTTGCACCATTTGTGGCGCACGATTTATCGATCAGGAAATGTTTACCAAGCACATACAAAAGCATGAACAGGAATTGTATGTAGATAATCCACTAGCGGCCATGTTCGATGATAGTCCAGCCGATCCCGGACAATTTCAAGTGGAACGACAGAACGAGAATGGGGAATATGCATGCGATTTGTGTGCCAAAACATTCCCCCAAGTGATTGCACTTAAGGTGCATCGCAAATGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACAGTTGAACAACATCAACAACAACAACAACAATTTGATGTTGCATCTACGCGAACTGCATGCTGTGGGTCTGGTGCCCAATCAACAGCAACAACAACTGAACTCCAGCCACAACCAGCAGCAGAGCCACAACTCATCCGCAACTTCAACGATGGCAACAGCAGCAAGCAAATCGCTGAAACGGAAACGTGAATTGAAATGCGATTATTGCGCCTCCACCTTCATCAGCAATAACAATCTGCGTCGTCACATGTATGAACTGCATAAACATGAGGTTAGCCACTTACCCGAACCACCGGTAATTGTGGTGGATGAGCTGCTCTCGTGCCGCCGTTGTGATCTTCAATTTGAAACCAAAGAATTGTGGATTGAGCATAAATTGGCAGATGCGAAAGTGGTGCGTCCGTTTTGCCCCTTTCAATGGGGATGTGATCTATGTGGCGAGTATTTGTCACGCAAAGAGAAACTCATCAATCATATTAATAATCACCTCAAGGAGGATGTTATAGTCCCCGTAGCAGAGAAGATAACTACATCAGTCACATCTAATGCAACATCAACGCCCATAGCAACAAACGCAACAGAAACTTTGAAAATTGGTATTACAAAGTTAGAAATAAAACCAGAATCAGATAGGGAGATATCCGCTTTGGCACAAAAAACTGAAGGAGCCGAAAAGAAAGTACAGATAACGGCAGACGGGTCGATGGAAACAACCTTAGAAATGAAAAACGAGAAGGCGAAAGCAGCTCAGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGGAAGAGAAGCAAGTTGTTGAAAGTGAGCAGCAACCTAAATCAGTTCCAGTTACTGATGATGATCTTGTTGAGGAAGTTCTCAGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCATTCCAGCGCCACCCATCGTGAATGGAAAACATCAGTTAAAAATGTCACCCAGTTCAGTGGAGGATAATGTTGATCATCATGTCGGTGATGTGGAAGATGATGGAGTAATACCCATCGAGGATATTATTGAAGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTAGCCACAGCCACATCGACAACATCATCATCGGAGAGTGAATCATTGACAACAAATACTACATCACATTCAATGGGTGAGCGGCGTAAAAACAAAGCAAGAGCAACAGCAGCGGCGGCGACAATAACTGACGCTGCTGATGCTGATGCTGATCAGTCTGATAATTCCAGCTATACGTGTGATCTATGTCAACTTTGTTTTGATTCTCAGGAGCAACTGCAGAGCCACATCAAAAGCCATTTTCTGAATGGACCAAAAATGTCAACGACAACGGGTCTAAAAATGGTGACAGCGGCAGCGACAGCAGCAGCGACGGCGGTGAGCACTTCTTCTAACATCATAAACAACAACAATAAAACCAAAATTACAACAACAAAATCTTCGTCAGTGAAGACCACTAATTGA
- Protein Sequence
- MCDTAINVNSTTTITTGATPSASGTNLPAATILTTATAAAAATVGGGTASKKEAQQRSPQNCCRLCIAPATECISIINSYAADKEPLTTKIYNCVNIKITSQDRLSQQICHACISYLNSWQSFKNRCLSSQSKQRQWLETTTATTSSKSKLLSYLDLNSAENGTGAGAGIAGSDHQSQSQRHHQQQPYRRYQQQRSRHQSQYQYTPRRSRQHQGRGGPGLSSSGRAAPSTQASAGAVAGHPTMRKLKSKMYLPLDITVPTPPIALPPPPPPPLPSAATATASSGLSLSSVQPLPPPKPLSMPMSMAATTSMYSTTTLAPTPTTPLLMPVTLQSATQQLRFFRRYSYNPLPAVPIKDEPIDDTDDDYQMKSIDESIDDMVDPTMFLERSELEGDVPLMTSDYDYTAQHGVTAAVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPVTKPTPALAVALELQRAAAAAATAEASRSCGNMSTQKYRQVVMNAFIKCEAGGYDYGNPEQYQALLSRDKIEFIEQNAEFLEQYQTMTCRCCNKFFSTYKNFMAHVRKKYPSLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVMNAINSKQNDEVGPSPAVPVIPAAVTVVSGSSASGTTTTSDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGLSSDNVSSTTVIGGTTTNVDNSHSPGKKSLLGALGIGSADESRSAGSAANAAPSLITSTPKPAAGGGSAATAASTTTASGGLLGGGAVAVANRDRDGAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEETTGSVAKKIRLDDSSNNSSLMGMAATQQKECPICNAVFSNNIGLSNHMRSHYTASANASASANASASTSASSSTNAALAAANRMTPKSLTITAAPPISAEAAATPTKSKTTIITGESNSHASSSSAAPQVQAIQFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGKAIKDEMIIKQFECEICSIVYSSEMELQQHKRSVHELATASSSTGTTTGSVATSSGTTTTPGLGANNVSSIPAPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECCLCRKVFFDRQMLDNHMPTCNRKPITSTGAHQQPQQQHHHHQQDQLRRGLLVFKHKTGDDDEEEEEDDQLQQQSHLQLDDTTDEAPDLAHTSAPTAASSSSAAVAHVKIRIPEVACTICGARFIDQEMFTKHIQKHEQELYVDNPLAAMFDDSPADPGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLNNINNNNNNLMLHLRELHAVGLVPNQQQQQLNSSHNQQQSHNSSATSTMATAASKSLKRKRELKCDYCASTFISNNNLRRHMYELHKHEVSHLPEPPVIVVDELLSCRRCDLQFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVAEKITTSVTSNATSTPIATNATETLKIGITKLEIKPESDREISALAQKTEGAEKKVQITADGSMETTLEMKNEKAKAAQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEKQVVESEQQPKSVPVTDDDLVEEVLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIPAPPIVNGKHQLKMSPSSVEDNVDHHVGDVEDDGVIPIEDIIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATATSTTSSSESESLTTNTTSHSMGERRKNKARATAAAATITDAADADADQSDNSSYTCDLCQLCFDSQEQLQSHIKSHFLNGPKMSTTTGLKMVTAAATAAATAVSTSSNIINNNNKTKITTTKSSSVKTTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00523881;
- 90% Identity
- iTF_00604254;
- 80% Identity
- -