Basic Information

Insect: Drosophila sturtevanti
Gene Symbol: -
Assembly: GCA_018150375.1
Location: JAECWJ010000708.1:214597-221500[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.6e-05 0.0011 19.2 2.1 1 23 159 181 159 181 0.97

2 18 5.2e-06 0.00036 20.7 0.4 1 23 187 209 187 209 0.97

3 18 2.3e-05 0.0016 18.7 0.4 1 23 215 237 215 237 0.98

4 18 1.1e-05 0.00077 19.7 3.1 1 23 243 265 243 265 0.97

5 18 2.5e-05 0.0018 18.6 4.7 1 23 271 293 271 293 0.99

6 18 4.6e-05 0.0032 17.8 5.7 1 23 299 321 299 321 0.97

7 18 2.2e-07 1.6e-05 25.0 4.3 1 23 327 349 327 349 0.98

8 18 8e-08 5.6e-06 26.4 2.4 1 23 355 377 355 377 0.97

9 18 4.7e-05 0.0033 17.7 6.7 1 23 384 406 384 406 0.97

10 18 8.1e-05 0.0057 17.0 6.5 1 23 412 434 412 434 0.98

11 18 7.2e-06 0.00051 20.3 4.5 1 23 440 462 440 462 0.98

12 18 5.3e-06 0.00037 20.7 8.1 1 23 468 490 468 490 0.98

13 18 4.3e-06 0.0003 21.0 7.6 1 23 496 518 496 518 0.97

14 18 4.8e-07 3.4e-05 24.0 7.7 1 23 524 546 524 546 0.98

15 18 0.00015 0.011 16.1 9.5 1 23 552 575 552 575 0.95

16 18 5.3e-05 0.0037 17.5 0.9 1 23 581 603 581 603 0.98

17 18 0.00056 0.04 14.3 4.4 1 23 613 635 613 635 0.98

18 18 6.6e-06 0.00047 20.4 1.6 1 23 641 664 641 664 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.6e-05	0.0011	19.2	2.1	1	23	159	181	159	181	0.97
2	18	5.2e-06	0.00036	20.7	0.4	1	23	187	209	187	209	0.97
3	18	2.3e-05	0.0016	18.7	0.4	1	23	215	237	215	237	0.98
4	18	1.1e-05	0.00077	19.7	3.1	1	23	243	265	243	265	0.97
5	18	2.5e-05	0.0018	18.6	4.7	1	23	271	293	271	293	0.99
6	18	4.6e-05	0.0032	17.8	5.7	1	23	299	321	299	321	0.97
7	18	2.2e-07	1.6e-05	25.0	4.3	1	23	327	349	327	349	0.98
8	18	8e-08	5.6e-06	26.4	2.4	1	23	355	377	355	377	0.97
9	18	4.7e-05	0.0033	17.7	6.7	1	23	384	406	384	406	0.97
10	18	8.1e-05	0.0057	17.0	6.5	1	23	412	434	412	434	0.98
11	18	7.2e-06	0.00051	20.3	4.5	1	23	440	462	440	462	0.98
12	18	5.3e-06	0.00037	20.7	8.1	1	23	468	490	468	490	0.98
13	18	4.3e-06	0.0003	21.0	7.6	1	23	496	518	496	518	0.97
14	18	4.8e-07	3.4e-05	24.0	7.7	1	23	524	546	524	546	0.98
15	18	0.00015	0.011	16.1	9.5	1	23	552	575	552	575	0.95
16	18	5.3e-05	0.0037	17.5	0.9	1	23	581	603	581	603	0.98
17	18	0.00056	0.04	14.3	4.4	1	23	613	635	613	635	0.98
18	18	6.6e-06	0.00047	20.4	1.6	1	23	641	664	641	664	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTTAGCGCTGCCAGTTCGGTACCATCGGTAGTTGCACCGGTGGTAACCACTGGAGGCACAACCATTACCTTGGGCGGTGGCCCACCACCGCCGCCCTCATCATTGGCCAAATCGGAGATTAAGGAAGATGGCAAACCGCCGCATGGCATGGAATTGTATAAAGTGAACATTGAGGATATTTCACAATTGTTTACATATCATGAAGTTTTTGGCAAAATACATGGGGATGTGGTGAATCATCAATTGGTGGCAGCGGCACATGTAACGACAACCACAAGCTCATCCACGGGCAGCAGTAGTGTAGCTAGTGGGGGCGGCGGGGGTACCACATCAAGCACAACGGGTGAGTTGCTTATGCCTAAAATGGAGGGCGGCATACATGGCAGCGTGGACGCTGGTGGCGGCGGCGGCGGTCAAACCCAGGTAGCCCTAGCGCCTGATGGTACGCCAATTGCCACGGGGACGCATGTCTGCGATATATGTGGCAAGATGTTCCAGTTTCGCTATCAGCTAATAGTCCATCGTCGATATCATAGTGAACGCAAACCGTTTATGTGTCAGGTATGCGGTCAGGGTTTTACCACATCACAGGATTTGACACGACATGGTAAAATCCATATTGGCGGACCGATGTTCACCTGCGTCGTTTGTTTTAATGTCTTCGCTAATAACGCCAGCCTGGAGCGGCATATGAAGCGTCATTCAACGGACAAACCATTCGCCTGCACCATTTGCCAAAAGACATTTGCCCGCAAAGAGCATCTGGACAATCATTTTCGTTCGCATACGGGCGAAACGCCCTTCCGTTGCCAGTACTGCGCAAAGACGTTTACGCGCAAGGAGCATATGGTTAACCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTTACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGTGATGTGTGCGGCAAGAAATATACACGGAAGGAGCATCTAGCTAATCATATGCGCTCCCATACAAACGAGACACCGTTTCGCTGTGAAATCTGCGGCAAGAGCTTTAGTCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGCGAGACGCCACATCGGTGCGATTTCTGTTCCAAGACGTTTACGCGCAAGGAACATTTATTAAATCACGTGCGTCAACATACGGGTGAATCGCCGCATCGCTGCTCCTACTGCATGAAGACGTTTACACGCAAGGAGCATCTGGTCAATCACATTCGTCAGCATACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACTCGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACATACTGCACCAAGACGTTTACACGCAAGGAGCACTTGACGAATCATGTGCGTCAGCATACAGGTGACTCACCGCATCGCTGCTCCTACTGCAAGAAGACATTCACTCGCAAAGAGCATCTGACGAATCATGTGCGATTGCATACTGGGGATTCGCCGCATAAGTGCGAATATTGCCAGAAGACATTCACCCGAAAGGAGCATCTCAACAATCATATGCGTCAGCACTCCAGCGATAATCCGCACTGTTGCAATGTCTGCAATAAGCCATTTACGCGCAAGGAGCATCTGATCAATCACATGTCACGCTGTCACACTGGCGATCGTCCCTTCACATGCGAGACATGCGGCAAATCGTTTCCACTCAAGGGCAATCTATTGTTCCATCAACGTAGCCATACCAAGGGTCAGGAGATGGAGCGTCCGTTCTCGTGTGAAAAGTGTCCCAAGAACTTTATATGCAAAGGTCACTTGGTTTCACATATGCGTTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCTTTCGTTGAGCGCGGAAATTTGAAGCGCCACATGAAGATGAATCATCCGGATGCTATGATGCCGCCACCACCCGTACATCCGCATCCGCAAATACCAGCTGGTGTACTGACCCAAGTCAAACAGGAAGTGAAACCGATCATAATTCCTCCACAACCGCTTCAGCTTGGTAAGGAGCAAGATCCGATGGTTGATGAGGAGGTGATGCTGATGATGATGATGATGATGATGCAGCTAGGTGAACTGAAGCAACGCCTATCCACGCATAAGCAGCTAGTTTATAGTATAAAAGTAGTTTTTTAA
Protein Sequence: MQHVSAASSVPSVVAPVVTTGGTTITLGGGPPPPPSSLAKSEIKEDGKPPHGMELYKVNIEDISQLFTYHEVFGKIHGDVVNHQLVAAAHVTTTTSSSTGSSSVASGGGGGTTSSTTGELLMPKMEGGIHGSVDAGGGGGGQTQVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCVVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPPQPLQLGKEQDPMVDEEVMLMMMMMMMQLGELKQRLSTHKQLVYSIKVVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00599004;
90% Identity: iTF_00915491;
80% Identity: -