Dstu013218.1
Basic Information
- Insect
- Drosophila sturtevanti
- Gene Symbol
- ftz-f1_1
- Assembly
- GCA_018150375.1
- Location
- JAECWJ010000688.1:1115329-1139210[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-19 4.6e-15 55.9 3.4 1 78 201 277 201 290 0.72 2 2 1.7e-71 1.4e-67 228.8 2.8 153 408 306 554 254 556 0.81
Sequence Information
- Coding Sequence
- ATGGTGGAAAAGGAGGGTGTAGAAGGCTATCAGGATACCACATCATCCCATTCACAACAAAGTGGTGGTGGTGGAGGTGGTGGTGGTGGTGGCGGTGGTGCCAATCTATTAAATGGCAGCTCCGGTTCAGGCAGTTCAACTGGTGGCTATATGCTATTACCGCCATCAAATAATTCCTCACATTTGGGTGGACCACAGAATTCCACAGCGGGTGGTAACACCTCATCAAATCCATCGGCCGGCGGTGGTGGCAATGGTGGTGGTGGTGGTGGTGGCGGCGGCGGCAATGGCAGTCATCATCCACATGGCGGCACTTCAGCATCGGCCTCCGGTGGCCACGGACATAATGCATCCGGTGAAGCCATCGATTTCAAGCATCTCTTTGAAGAACTATGCCCCGTATGCGGCGATAAAGTCAGTGGCTATCATTATGGCCTGCTCACCTGTGAGTCCTGCAAAGGTTTCTTTAAGCGAACGGTACAAAATAAAAAGGTTTATACCTGTGTGGCCGAACGATCCTGTCACATCGATAAAACGCAACGGAAACGATGTCCATATTGTCGTTTCCAAAAATGTCTAGAAGTGGGCATGAAATTGGAGGCTGTACGTGCCGATCGTATGCGTGGCGGTCGGAATAAATTTGGACCCATGTACAAGCGAGATCGGGCGCGAAAATTGCAGGTGATGAGACAAAGGCAATTGGCATTGCAAGCTCTCCGCAGTTCCATGGGTACCGATATCAAACAGTCACCACTCTCGCCAGGCTATCAGCAAGCATATCCAAATATGAACATTAAGCAGGAAATACAAATACCTCAGGTATCCTCACTTACACAATCGCCCGACTCATCGCCTAGCCCTATTGCCATTGCATTAGGACAAAATACAGCCGAATCGAAATTGTGTTTCGATTCCGGTACACATCCATCGAGTACAGGTGATACGCTTATTGAGCCACTGAGAGTCTCTCCCATGATACGTGAATTTGTGCAATCGATCGATGATCGGGAATGGCAAACGCAATTGTTTGCATTATTGCAGAAGCAAACCTACAATCAAGTTGAAGTGGATCTCTTTGAGCTGATGTGTAAAGTGCTCGATCAGAATTTGTTCTCTCAAGTCGATTGGGCAAGAAATACAGTTTTCTTTAAGGATTTGAAGGTTGATGATCAAATGAAGCTTTTACAACACTCCTGGTCGGATATGCTAGTGCTGGATCATCTCCATCATCGCATCCATAATGGCCTGCCCGATGAGACGCAATTGAATAATGGTCAAGTGTTCAATCTATTAAGTCTTGGCCTTTTGGGTGTACCACAATTGGGTGATTATTTCAATGAGCTGCAAAATAAATTGCAGGATTTGAAATTTGATATGGGCGATTATGTATGCATGAAATTCCTAATTCTATTGAATCCAAATGTGCGAGGTATTGTGAATAAAAAGACCGTTTCAGAGGGACACGATAATGTTCAGGCAGCCCTCTTGGACTATACGTTAACATGTTATCCTTCAGTTAATGACAAATTTAGTAGGCTAGTGAATATATTACCGGAAATCCATGCCATGGCCGCTCGCGGCGAGGAGCACCTCTATTCGAAACATTGCGCCGGCAGTGCGCCCACACAGACACTGCTCATGGAAATGTTGCATGCCAAACGTAAGGTGTAA
- Protein Sequence
- MVEKEGVEGYQDTTSSHSQQSGGGGGGGGGGGGANLLNGSSGSGSSTGGYMLLPPSNNSSHLGGPQNSTAGGNTSSNPSAGGGGNGGGGGGGGGGNGSHHPHGGTSASASGGHGHNASGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRSSMGTDIKQSPLSPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQNTAESKLCFDSGTHPSSTGDTLIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLLSLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPNVRGIVNKKTVSEGHDNVQAALLDYTLTCYPSVNDKFSRLVNILPEIHAMAARGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00915390;
- 90% Identity
- iTF_00600371; iTF_00523730; iTF_00523749; iTF_00604151; iTF_00604130; iTF_00591001; iTF_00591023; iTF_00590269; iTF_00590291;
- 80% Identity
- iTF_00600371;