Dsta008622.1
Basic Information
- Insect
- Drosophila stalkeri
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035047405.1
- Location
- JAWNPR010000071.1:25504-30833[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-113 5.4e-110 367.5 27.1 1 299 3 293 3 294 0.98 2 2 0.23 7.2e+02 -0.7 3.5 218 241 320 343 296 367 0.50
Sequence Information
- Coding Sequence
- atgcaGGCCGAAGCACGTCTTGCAGCTCGACGTCTAGCCCGCGCTGAAGCCCGGGATATACGTATGCGTGAACTAGAGAGACAACAAAAAGAATTGGAACAAAATGCAGATCGTGCATTTGACATGCAAAGCACGAGTGGAAATGTTACCGAATCACTCTCAGCCCATTCTGTACGCCACGGATATAGTGGCATTAATAACGTGGGTCGTGCAACTGCTTCGCGACGTAGCAGTGAAGATTCATTGGAGGATGAAAGTCGAAGCTTGCGTGACATTAAATACGAACTTAAAGACGTCGAAGAACGTTTTCGAAAAGCCATGATAACGAATGCTCAACTAGACAATGATCGTTCATCACAAACCTATGAAGTTAAACTACTTAAAGATAAAAGTGAAGCGATGCAAGAATCTCTCGCTCAATTGCAACgcgaatttaaaaataaactccgCGATTGCGGTGCCCTTAAACGCAGCTTGGATCGCACAACACTTGAATTAAAGCTAGTGCAAGGTCAACTAAGTGAGCGTGATACACTAATAGAAGAACACGgccttgttattgttgctattgaaaATAATGATGGTAGTGATGCGAAGCGCGCTCTGGTCAGTGTTGAAAACGCCAATGTGCTTTCAACTGTTCAGGGTTCTCTTGatgTAAGAATTAACAAGTTTACAGAGGAAAAGCAGCGGCTTCTTAACGAAATGCAAAATCTGCGTGAACAGCTAGATGCTTTTAAAAATGAAGGCAGGCCAGGGCGAGACAGTCTACTAAGTGACTTTTTAGGGTACGATGATGACTATGATGCTCAGAgagaatcaaataaaatcatatcggattataaatataaactacaaAAAGCTGAACAGGAAATCGCAAGTCTTCAGGCAAACTTGGCGCGCTCAGAGACTCAAGTTATACGTTATAAAAGTACTGCTGAAGCTGCTGAAAAATCTGAGGCTGAACTGAAAGTAGAAAGACGTAAACTGCAACGTGAACACCGGGAGATTTTAGAACGTTTGGAGGAAGCAGAAACTGCCAATAATCATCTACTTAAACGActtgacaaattaaaaaatgcaaaaagcacAATTTTGAAAGATTTATGA
- Protein Sequence
- MQAEARLAARRLARAEARDIRMRELERQQKELEQNADRAFDMQSTSGNVTESLSAHSVRHGYSGINNVGRATASRRSSEDSLEDESRSLRDIKYELKDVEERFRKAMITNAQLDNDRSSQTYEVKLLKDKSEAMQESLAQLQREFKNKLRDCGALKRSLDRTTLELKLVQGQLSERDTLIEEHGLVIVAIENNDGSDAKRALVSVENANVLSTVQGSLDVRINKFTEEKQRLLNEMQNLREQLDAFKNEGRPGRDSLLSDFLGYDDDYDAQRESNKIISDYKYKLQKAEQEIASLQANLARSETQVIRYKSTAEAAEKSEAELKVERRKLQREHREILERLEEAETANNHLLKRLDKLKNAKSTILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336724;
- 90% Identity
- -
- 80% Identity
- -