Basic Information

Insect: Drosophila sordidula
Gene Symbol: -
Assembly: GCA_035047465.1
Location: JAWNPQ010000029.1:7678224-7684428[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.053 3.4 8.2 0.2 1 23 1322 1345 1322 1345 0.94

2 13 7.9 5.1e+02 1.4 0.2 1 23 1505 1527 1505 1527 0.91

3 13 0.00018 0.011 16.0 2.7 2 23 1530 1551 1530 1551 0.97

4 13 6.8e-05 0.0044 17.3 0.2 3 23 1559 1579 1557 1579 0.98

5 13 5.6e-07 3.6e-05 23.9 4.1 2 23 1586 1607 1585 1607 0.97

6 13 5.3 3.4e+02 1.9 0.4 5 23 1620 1638 1618 1638 0.96

7 13 1.3 86 3.8 5.4 3 23 1645 1666 1643 1666 0.93

8 13 0.14 9.1 6.9 0.2 2 23 1677 1697 1676 1697 0.96

9 13 5.4e-05 0.0035 17.6 0.4 1 19 1703 1721 1703 1725 0.95

10 13 1.5e-05 0.001 19.4 0.5 1 23 1733 1755 1733 1755 0.98

11 13 0.0001 0.0065 16.8 7.6 1 23 1761 1783 1761 1784 0.96

12 13 0.0002 0.013 15.9 5.9 1 23 1789 1811 1789 1811 0.98

13 13 0.028 1.8 9.1 8.2 1 23 1817 1839 1817 1840 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.053	3.4	8.2	0.2	1	23	1322	1345	1322	1345	0.94
2	13	7.9	5.1e+02	1.4	0.2	1	23	1505	1527	1505	1527	0.91
3	13	0.00018	0.011	16.0	2.7	2	23	1530	1551	1530	1551	0.97
4	13	6.8e-05	0.0044	17.3	0.2	3	23	1559	1579	1557	1579	0.98
5	13	5.6e-07	3.6e-05	23.9	4.1	2	23	1586	1607	1585	1607	0.97
6	13	5.3	3.4e+02	1.9	0.4	5	23	1620	1638	1618	1638	0.96
7	13	1.3	86	3.8	5.4	3	23	1645	1666	1643	1666	0.93
8	13	0.14	9.1	6.9	0.2	2	23	1677	1697	1676	1697	0.96
9	13	5.4e-05	0.0035	17.6	0.4	1	19	1703	1721	1703	1725	0.95
10	13	1.5e-05	0.001	19.4	0.5	1	23	1733	1755	1733	1755	0.98
11	13	0.0001	0.0065	16.8	7.6	1	23	1761	1783	1761	1784	0.96
12	13	0.0002	0.013	15.9	5.9	1	23	1789	1811	1789	1811	0.98
13	13	0.028	1.8	9.1	8.2	1	23	1817	1839	1817	1840	0.95

Sequence Information

Coding Sequence: ATGGTGGACAATGTACAGTGCCCCGTGTGCACCCTGTATCTGCATGCGGGCATGAATCTCTCCGATCACTTGGAGACACATCCCAAGGAGCAGGTCATCAAGGCGCTGGTGCAAATGACCATCGTTGGCAACAATGGTCTGGACAGCGCCCTGGCGGCAGCTGTGCTCTCCGGCAGCGCTGCAACAACAGATGCGGGTGGCGCCGcctcctcatcatcatcatctacGCCCGCTACTGCTGATGTGAAGCCAGTTGTGCCAGCATCACCtccagctacaacaacaacaacaacagcaacggcaacaacatccAAATCAGCAGCACCCAAAGCTGCgttgcacagcagcagcagcagcagcagcagcagcagcagcagtagcagcagcagcggctgcaacaacaacaaattaagcaATCCACCGATTAAGGCAGTTAAAAGCGCGCCACCCTCGACTGAGGCGCCAGCCACCACATCCAACACACCCACCACAAGCAGCGTGGCCGCCGTCTACTCCGACTATCGCTATGAACAGCagtcccagcagcagcagcatcagcagcatcatgGCTTTGCACGTGCCGCCACCACGCTGGTCATACCACAGgcaccacagcagcagcatcagcatcagcatcagttcctggccagccagcagcagtcTGCGCACTTTGCCCACcatccgcagcagcagccggccaTGAAGTACACCTACGCAACAgcgctgccaccgccgccgcccccgctgCAGCTCTTTGCGCAGCAGGCGACGGCAACGCAGCCACATCAGAAGCCACCACCCGCCTATGGCGCCGCCATCAGTCAAATTCGATCTCAgcacaaccaaaacaaacaacaacaacaacaacagcagcagcagcagcaacagcagcaacacataAACGTGCAACAGAACGTTAACATAGCACCACCGAGTGACAAACACGGCAAAGTCCATGCAGAAATCTTTCTAAATCCACCGCCTCCACCACCGCCACAGCTCACGATTCCGTCAACTTCAGCTGCATCCAGACTGCAACATACCCAAcaaccgcaacagcagcaacagcaacaacaacaacaacagcagcaatctCTTGccgcaggcagcagcaacagcagctacgTGGTAGCCACCTACGCCAGCTCCTGGTCGGCTCTGATGTCATCGAGCTCGGCCGGACGCGCCAACAGCAGTCGCCAGACGAGCAGCTCGCCCTTTGGTGCCCTGCTGAATGCTGCTGCGCAAGCTGCCTGCGCCTCGCCCTCCTCCTCTAGCGCTGCGTCTGTGCTACGCTATGCCGAGTCGCCCGTGGCGCACTATCTGGAGCGGGAGAACGGCGACTTTATAGTCCAGGAGACGCCCAAGCACATTGTCGAGTGCGTGGAGAAGGACGACGGCGAGTTCTCTGTGATTGAGCGCATCTATCAGTCGCCACCCAGCGTGCTGCACATacacgacgacgatgacgacgacgaagaagaggaagacgaggaggacgacgatAAGGGCTGGACAAACAGCGATGATGAGGATCACTTGAAGCTGGATCACGAGCATGTCGAGGATGGCGACGACGAGCACGAGGATAGCCGGAGCAGAGTTGGCCCCAAGACCACAACGAAAAAGTCACGCAAGGCAAAACCAAATGGCAGAAAGCACAAACGTGCTGCCAAGCATCAGCCGGAGGATGAGGACGACTTCATGAGCATAGGCAGCAGCTGTGCGGAGAGCGATCAtcagctggaggagcagcagccggcgccggcgccggcgcatGCGCAGCCGTCGCATGCGGCATCGGTTGCTTCTGCGTCGCCGGCTCAACTGTGCACGGCGCCGTCGACGAGCAGTGGAGCAGCCGGAGCGGCTGTGGTCGCTGTTTGCTCGAGCACTGCCAGCTCGACGCAAAGTGGCTCCACCAAGTCCAAGAAGAATCGTGTGACGGTGCTCAGCGATGTGCCGCTGAACATGAACGAGTATCTGGATCTGGTCGGCAACATTGTGGCCTCCAGTCGCATTGGTGCGGCCCGTCCGTTTGCCGCCGTGGCGCCCATACCGCTGGTCAAGGTGGAGAAGGAGGAGCCGCTGGATGACTACGACACCGTGCGCGACGCAGAGATGCACTCAATGGAGCCAAAGGCCAGCCTGGAAcatgccagcggcagcagcagcagcaatagcagcagcagcagcagcagcggacaCGGCACCACCAGCGTCATTCGCAtggccagcaccagcagcagcgcgaacGTGGCCACCGAGGATCTCACACAGCCGCCGCCCATGAAGGTGGAGGTGGAGCCAACGGTGCTGATGCCGCAGCGCTTCTCAACGCCGGCGCAGCAGCGTGGACCCAAGAAATTAGTCATCAAACCAAAGGccacggcgacgacgacgacgacgacgacggcgacggcgacaacgaAAAAGACTGAGAACAACAGCATCGCCGAAAGCAGCCCCAGCATATCAAAGGGGCCCACGGATCCGGTGCAGATCAAGAGCGAGAACGTGGAGGCGGCCACGACgagcgccggcagcagcagcattctGGAGAAGCATCTGACCAGCTATGCGGCCCAGCAGGCGCGCAAGCACACGGCCGTCAACGATGATGATGCACGCGTCCTGCTGGAGTTTGCCAACTCgaagcagctgccgccggctGGGAACAGCAATCAGACCACGTTTGTGGTGAACGCGGCCAGCTTTGCGTCGGCGGGCTCCGTgtttgccagcagcagcgggtcCGTTCCGAAGTCGACCAAGCCGGGTGATGAATACATTCTGCCTGATGATAGCAAACTGGAGGTGGATGAAATTGTGATATCCTCCTCGTCTTCCTATGCCTCCAACATGCAGCAGCattcgcagccgcagcagcagtcgcagcagcagcagcagccagcgcagCAGGCCttgcagcaggcgcagcagccgTCCGCCTTTACAGACTTTAATTTCCTGTACCATCCAAgcacgacaacagcagcagcagcagcaacggcaacaaccgCTTCCAACTTTGCGCCATTTGgcatacagcagcagcagcagcagcaacagcagcagctgcaacatccACACCACGGCTCCAGCGAAGCCACCAATGCCGCCACGCTGGCCTCCTCCTCCAGCAACTCATCCGCATTGGACCAGGATTGCTCGATGAATGCCACGTTCCGCATGACCAAGCAGCAAACAACGCTGGGCGCCTGGTATCagtcacagcagcaacagcagcagcaggcgcaggcaACCACCTCGCACAGCTCCGGCGTGGAGCAGTCGAGCAATTTCATCGCCGCACTCGCGGCCGTCGACTGCTGCAGCGTGGCGGCCGTTGACAGCGATGCCAAGTACTTGGACCTGGACGCCTGCAAGCGGGAGCAGctcagcaatagcagcagccaTTTGCCGTCGGCCTCAGCGTCCACGTCGACCACATCGTCGTCGTTTGCGGCTGCACCGACGGAGAGCAGTCTGGTTGGTGGCCTGGGCCTAAACATACGCACCGATGAGAAGATGCCCGCCAAGGGTGAGATCTCCGAGCAGGAGAGCAACTGCGACATCGAGAACTCCTGGAGTCAATCGATGTATGGCGACATATCACAGCGTTACTTTAGGGGCCAGTTCACCGATGGCTACAATCAGCAGCTGGCCGATTGGCGGCACGACTACTATCCGGCCCAGGATCTCAGTGGCCAGCAGACGCAGCGAGAGCAAAAGCGCTTTGATTTCAATGCGGTCGCCTCGGAGTACGCGCAGCCGGGCGATCTGGACGCCACCTCGAGCTCAACGAGAAACAATCATTTGCTGGATGCACAGCCCACCACTTCCACGTCGTCGTCGGCTATGCTGGCTGGTCCACCAATAGCCTCGACATCCCGTGCGGCCGCCGAGGCGGAGGCCGTGGCCGCGGCGCTGGCGCAACGGAAGCCGCCGCGGCGCAAGATCTACAAGTGTCCGCACTGTGCGGCCATCTTTGAGAAGCTGAAGGAGCGCAACGCGCACATGATCGGCGAGCACAACTATGTGCGCCAGAATCGACGTCTCATCTGCACGCTGGCGTCGCATATGCCACAGCCGCAGGCTCAACAGgatccgcagcagcagcagcagcatctgttGCTGCAGGCGGGGCACAGCAATGACGATGTCTTGCACGAGGACTCCAAGGATGGCATTGTGAAGATCAAGCAGGAGCACTGTCAGGATAAACAGGATTCAACGGAGCAGCTGCTTGGCCACATGGAGCTGCCCGACGTCAAGGACACCGGCCTGCTCGATGCCACCAATGAGAACGGCCCCGATGCGGACATGAAGCCACTACCCAGCGTCACAGAGCTGGACGAGAAGCCCACCATAGCGCCGTTGGCCATGACCACGCCCGCTGCCAAACTGGCCGCCCTCTATCGCATGCTCATCGCCTACAACGAGTCGAAGCTGGGCCAGGAGCGCAACAATCTCAGCGAGCTGGAGCAGAAGGCCATGGAGAAGTCCATATTCCTTTGCTACGTCTGCCGCACCGATTTCCCCTCGGTGAAGTTGTACGATGCGCATCTGACCGAGCATCCGGCCGAGTGTTTCACCTGCGGCAAGAAATTCTATCGGTGGAAGAACTTCTCGCTGCATCTGAAACGCCATCTCGGCTGGAAGGAGTTCGGCTGCTACGTCTGCGACAAGAAGTTTGTGGTGCGCAGCGCACTCGTGGAGCACATGCGGATGCACACGGGCCAGACGCCGCTCAAGTGCAAGATATGCGGCAAGAAGTTCAAGCGCTATTCCAACTTGACGCAGCATCGCAAGCGTCACACCAAGATGATGGTGCGCAAGAAGGAGTACGTGTGCCACTGCGGCGAGGTGCTGCCCTCGAAGGCGCGCTTCCTGTGGCACAAGGAGACGCACGACGTGAAGCCCAAGTGCTGTCCGTATTGCTGCGATCGTTTCGTGCACGCGAACTCGCTGCGCCGGCACATTCGACTGGCCCATTCGGACAAGTTCGACTATGCCGAGCCCATGGAGTGTCCCATGTGCAAGCAGATCTTTGCCAAGACATCGATCAAGGCGCACATGGCCACCCATTCGACGGATCCGCAATACGATTGCGCCATTTGCAACAAGAGCTTCTCGACCAAGTGGAACCTCAAGATACACTCGTGGGTGCACGCGAACCGCACGGCCAAACCGTTCAAGTGCGAGTACTGCCCGAAGGCCTTTGTGCGCGAGCTGGACTTCAAGAACCACATGAACGCCCACAAGCAGATCAAGCCCTACACCTGCGAGTACTGCGGCTGCAAGTTCATACGCAAGTACAACTATATGCGGCATCGGCGGGAGCATCATGGCAACAAGAAGTTCACCTGCGACCAGTGCGACAAGTCTTTCCATCGCCACTACTATCTGATCGAGCACAGGCGCATCCATACCGGAGAGCGGCCATTCCACTGCACCATCTGTGGCAAGAGCTCGACAACGAAGACCAATCACAACAAGCATCTGAAGATACATCATTCGCGCGATCCGTTCACTGTGGAGGTTTAA
Protein Sequence: MVDNVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNNGLDSALAAAVLSGSAATTDAGGAASSSSSSTPATADVKPVVPASPPATTTTTTATATTSKSAAPKAALHSSSSSSSSSSSSSSSSGCNNNKLSNPPIKAVKSAPPSTEAPATTSNTPTTSSVAAVYSDYRYEQQSQQQQHQQHHGFARAATTLVIPQAPQQQHQHQHQFLASQQQSAHFAHHPQQQPAMKYTYATALPPPPPPLQLFAQQATATQPHQKPPPAYGAAISQIRSQHNQNKQQQQQQQQQQQQQQHINVQQNVNIAPPSDKHGKVHAEIFLNPPPPPPPQLTIPSTSAASRLQHTQQPQQQQQQQQQQQQQSLAAGSSNSSYVVATYASSWSALMSSSSAGRANSSRQTSSSPFGALLNAAAQAACASPSSSSAASVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDDDDEEEEDEEDDDKGWTNSDDEDHLKLDHEHVEDGDDEHEDSRSRVGPKTTTKKSRKAKPNGRKHKRAAKHQPEDEDDFMSIGSSCAESDHQLEEQQPAPAPAHAQPSHAASVASASPAQLCTAPSTSSGAAGAAVVAVCSSTASSTQSGSTKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGAARPFAAVAPIPLVKVEKEEPLDDYDTVRDAEMHSMEPKASLEHASGSSSSNSSSSSSSGHGTTSVIRMASTSSSANVATEDLTQPPPMKVEVEPTVLMPQRFSTPAQQRGPKKLVIKPKATATTTTTTTATATTKKTENNSIAESSPSISKGPTDPVQIKSENVEAATTSAGSSSILEKHLTSYAAQQARKHTAVNDDDARVLLEFANSKQLPPAGNSNQTTFVVNAASFASAGSVFASSSGSVPKSTKPGDEYILPDDSKLEVDEIVISSSSSYASNMQQHSQPQQQSQQQQQPAQQALQQAQQPSAFTDFNFLYHPSTTTAAAAATATTASNFAPFGIQQQQQQQQQQLQHPHHGSSEATNAATLASSSSNSSALDQDCSMNATFRMTKQQTTLGAWYQSQQQQQQQAQATTSHSSGVEQSSNFIAALAAVDCCSVAAVDSDAKYLDLDACKREQLSNSSSHLPSASASTSTTSSSFAAAPTESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRGQFTDGYNQQLADWRHDYYPAQDLSGQQTQREQKRFDFNAVASEYAQPGDLDATSSSTRNNHLLDAQPTTSTSSSAMLAGPPIASTSRAAAEAEAVAAALAQRKPPRRKIYKCPHCAAIFEKLKERNAHMIGEHNYVRQNRRLICTLASHMPQPQAQQDPQQQQQHLLLQAGHSNDDVLHEDSKDGIVKIKQEHCQDKQDSTEQLLGHMELPDVKDTGLLDATNENGPDADMKPLPSVTELDEKPTIAPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDVKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00516419;
90% Identity: iTF_00589009;
80% Identity: -