Dsim001481.1
Basic Information
- Insect
- Drosophila simulans
- Gene Symbol
- DMRT2
- Assembly
- GCA_016746395.1
- Location
- NC:12854174-12856359[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4 1.4e+04 -4.8 1.4 30 35 78 82 76 86 0.51 2 3 4.1e-24 1.4e-20 72.5 16.3 1 47 116 162 116 162 0.99 3 3 0.52 1.8e+03 -1.5 0.1 29 46 222 239 220 240 0.73
Sequence Information
- Coding Sequence
- ATGCACTTTGACGAAACACGGAGTCCAAACAAAGATGTACGGATGGGAAAGAGCCAGCGATTAGCAGCCAATGGCAGGCAAGGAACCGatcccgattccgatcccTCGCATGCTCGCTGTGGTGTACCTAGTGGTAGTACACCTCGTGGGCGTCGGATCCCCTGacacgacgacgacgacggcggaAACCACTTGACGCTGCCAGACAGTCTGACGGCGACAAGTAGCTGCGGTTGCCAGTGCTTAAATGTTCGCGCCCCGGTCCGCATCCTTTTAGTCGATCAGCGAGCGAGGATGAGCAAGGACGCCAGTGTTAGGATTTGCCAGCGGGAGCGACGTCTCCTGCGGACGCCGAAGTGCGCCAGGTGTCGCAATCACGGCGTCATCTCCTGTGTCAAGGGTCACAAGCGTCTGTGCCGTTGGCGCGAATGCTGCTGCCCCAATTGCCAACTGGTCGTCGATCGCCAGCGGGTGATGGCCGCCCAGGTGGCGCTGCGGCGTCAGCAAACCATGGAGGCCCTGGAGGCCACCGCATCATCCACAAAATCTTCGGGCGTAACGTCGGCCAGCGCCAACaactccagcagcagcgaggGCGAGGACTCGCTAACCTCCACTTCACCACCGCCggcacatccgcatccgcattcgcatcccACATCTTGCGTTACCAGATCATCTTCATCCTCAGCCACCCGACAGGCTCTGATGGCCCAAAAGAGGATCTACAAGCAGAGACTACGCAGTTTGCAGCAATCCACGTTGCATATCACAGCCGCCATGGAAGAATACAAACAGCGATTTCCCACGTTCAGCTCGCCATTGATGGAGCGCATGCGCAAACGGCGGGCGTTCGCCGATCCGGAACTGAACCACGTCATGGAGGCGACGCTGGGCGGGAACGCTTTGTACTTTGCCAccgttgccgccgccgccgccgccgcctgcgCCCCCGTTCACCAGGAGCAGCACATTTATCACCCGATGCCGCCGACGATACCGCTAACGATCCCGCCCACAAATCCAGCGATGACCACGCCCGCAGTCACCGCCTCCACCGCCAGTGGAAAGAAGCCCAAGCTGAGTTTCTCCATCGAATCCATCATGGGCATCAGCACGTAG
- Protein Sequence
- MHFDETRSPNKDVRMGKSQRLAANGRQGTDPDSDPSHARCGVPSGSTPRGRRIP*HDDDDGGNHLTLPDSLTATSSCGCQCLNVRAPVRILLVDQRARMSKDASVRICQRERRLLRTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEATASSTKSSGVTSASANNSSSSEGEDSLTSTSPPPAHPHPHSHPTSCVTRSSSSSATRQALMAQKRIYKQRLRSLQQSTLHITAAMEEYKQRFPTFSSPLMERMRKRRAFADPELNHVMEATLGGNALYFATVAAAAAAACAPVHQEQHIYHPMPPTIPLTIPPTNPAMTTPAVTASTASGKKPKLSFSIESIMGIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00592409; iTF_00539676;
- 90% Identity
- iTF_00539676;
- 80% Identity
- -