Dsec010877.1
Basic Information
- Insect
- Drosophila sechellia
- Gene Symbol
- DMRT2
- Assembly
- GCA_004382195.1
- Location
- NC:13173552-13175667[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4 1.4e+04 -4.7 1.4 30 35 77 81 75 85 0.51 2 3 4e-24 1.4e-20 72.5 16.3 1 47 115 161 115 161 0.99 3 3 0.42 1.4e+03 -1.2 0.1 29 46 220 237 218 238 0.75
Sequence Information
- Coding Sequence
- ATGCACTTTGACGAAACACGGAGTCCAAACAAAGATTTACGGATTGGAAAGAGCCAGCGATTAGCAGCCAATGGCAGGCAAGGAACCGATCCCGATTCCGATCCCTCGTATGCTCGCTGTGGTGTACCTAGTGGTAGTACACCTCGTGGGCGTCGGATCCCCTGacacgacgacgacgacggaAACCACTTGACGCTGCCAGACAGTCTGACGGCGACAAGTAGCTGCGGTTGCCAGTGCTTAAATGTTCGCGCCCCGGTCCGCATCCTTTTAGTCGATCAGCAAGCGAGGATGAGCAAGGACGCCAGTGTTAGGATTTGCCAGCGGGAGCGACGTCTCCTGCGGACGCCGAAGTGCGCCAGGTGTCGCAATCACGGCGTCATCTCCTGTGTCAAGGGTCACAAGCGTCTGTGCCGTTGGCGCGAGTGCTGCTGCCCCAATTGCCAACTGGTCGTCGATCGCCAGCGGGTGATGGCCGCCCAGGTGGCCCTGCGGCGTCAGCAGACCATGGAGGCCCTGGAGGCCACCGCATCCACAAAATCTTCGGGCGTAACGTCGGCCAGCGCCAACAACTCCAGCAGCAGCGAGGGCGAAGACTCGCTAACCTCCACTTCACCACCGCCggcacatccacatccgcattcGCATCCCACATCTTGCGTTACCAGCTCATCTTCATCCTCAGCCACCCGACAGGCTCTGATGGCCCAAAAGAGGATCTACAAGCAGAGACTACGCAGTTTGCAGCAGTCCACGCTGCATATCACAGCCGCTATGGAAGAATACAAACAGCGATTTCCCACGTTCAGCTCGCCATTGATGGAGCGCATGCGCAAACGGCGGGCGTTCGCCGATCCGGAACTGAACCACGTCATGGAGGCGACGCTGGGCGGGAACGCTTTGTACTTTGCCACcgttgccgccgccgccgcctgcGCCCCCGTTCACCAGGAGCAGCACATTTATCACCCGATGCCGCCGACGATACCGTTAACGATCCCGCCCACAAATCCAGCGATGACCACGCCCGCGGTCACCGCCTCCTCCGGCAGTGGAAAGAAGCCCAAACTGAGTTTCTCCATCGAATCCATCATGGGCATCAGCACGTAG
- Protein Sequence
- MHFDETRSPNKDLRIGKSQRLAANGRQGTDPDSDPSYARCGVPSGSTPRGRRIP*HDDDDGNHLTLPDSLTATSSCGCQCLNVRAPVRILLVDQQARMSKDASVRICQRERRLLRTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEATASTKSSGVTSASANNSSSSEGEDSLTSTSPPPAHPHPHSHPTSCVTSSSSSSATRQALMAQKRIYKQRLRSLQQSTLHITAAMEEYKQRFPTFSSPLMERMRKRRAFADPELNHVMEATLGGNALYFATVAAAAACAPVHQEQHIYHPMPPTIPLTIPPTNPAMTTPAVTASSGSGKKPKLSFSIESIMGIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00596676;
- 90% Identity
- iTF_00539676;
- 80% Identity
- -