Basic Information

Insect: Drosophila siamana
Gene Symbol: stc
Assembly: GCA_035047445.1
Location: JAWNPP010000016.1:19899742-19903193[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.5 1.2e+04 -3.7 0.5 15 18 380 383 379 384 0.79

2 16 2 1.6e+04 -4.1 1.6 15 19 407 411 406 411 0.81

3 16 0.04 3.2e+02 1.3 1.6 4 11 440 447 439 449 0.91

4 16 6e-07 0.0047 16.7 15.1 1 19 452 469 452 469 0.93

5 16 1.7 1.4e+04 -3.9 0.9 6 10 495 499 494 499 0.88

6 16 4.4e-08 0.00035 20.4 13.8 1 18 505 522 505 523 0.98

7 16 2 1.6e+04 -6.2 4.1 7 13 527 533 527 534 0.77

8 16 2e-09 1.6e-05 24.6 12.9 1 19 563 581 563 581 0.98

9 16 0.25 1.9e+03 -1.2 1.2 5 10 611 616 611 616 0.96

10 16 3e-05 0.24 11.3 17.5 4 19 629 644 622 644 0.88

11 16 0.06 4.7e+02 0.8 11.6 1 11 684 694 684 706 0.79

12 16 2.9e-10 2.2e-06 27.4 15.1 1 18 711 728 711 729 0.97

13 16 2 1.6e+04 -4.4 1.2 6 10 758 762 758 762 0.88

14 16 2 1.6e+04 -8.4 11.6 4 18 770 785 766 786 0.77

15 16 7.2e-09 5.6e-05 22.9 11.4 1 16 822 837 822 844 0.88

16 16 4.1e-07 0.0032 17.3 13.9 1 19 854 873 854 873 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.5	1.2e+04	-3.7	0.5	15	18	380	383	379	384	0.79
2	16	2	1.6e+04	-4.1	1.6	15	19	407	411	406	411	0.81
3	16	0.04	3.2e+02	1.3	1.6	4	11	440	447	439	449	0.91
4	16	6e-07	0.0047	16.7	15.1	1	19	452	469	452	469	0.93
5	16	1.7	1.4e+04	-3.9	0.9	6	10	495	499	494	499	0.88
6	16	4.4e-08	0.00035	20.4	13.8	1	18	505	522	505	523	0.98
7	16	2	1.6e+04	-6.2	4.1	7	13	527	533	527	534	0.77
8	16	2e-09	1.6e-05	24.6	12.9	1	19	563	581	563	581	0.98
9	16	0.25	1.9e+03	-1.2	1.2	5	10	611	616	611	616	0.96
10	16	3e-05	0.24	11.3	17.5	4	19	629	644	622	644	0.88
11	16	0.06	4.7e+02	0.8	11.6	1	11	684	694	684	706	0.79
12	16	2.9e-10	2.2e-06	27.4	15.1	1	18	711	728	711	729	0.97
13	16	2	1.6e+04	-4.4	1.2	6	10	758	762	758	762	0.88
14	16	2	1.6e+04	-8.4	11.6	4	18	770	785	766	786	0.77
15	16	7.2e-09	5.6e-05	22.9	11.4	1	16	822	837	822	844	0.88
16	16	4.1e-07	0.0032	17.3	13.9	1	19	854	873	854	873	0.96

Sequence Information

Coding Sequence: ATGGCAGACtattggcagcaacagcagcagccgcaacagcttCCTGTCAACGTATTAGGTGACGATTTGGCAGCTCGAGATGAGTCAGCTGCTACATGTAACGGCGGAAACGGTGGCAACAGCGCGAATGGTGGCAGCGCGGTGCCTATTGctacaggcaacaacaataacaactatgTAAATTTCAATCAGTTTATCACGCAGCATAACCTGTCCAGCTCAAACCTGAGTTACAGCATTGGGGGCGGAGGTGGTGCGTTTGGATTAACACcgaatagcaacagcaataccAGCTTTGGTGGAGTAAACTCACAAATCTTGTTCGGTTTTCAAAATGGCGATGGAACAGCGGCGAGTGGAAACGTTGGCTCTTTCCACAATTATCAAGGATCTTCGCGTCATTCGAATGCATACTCAACGATAGACAGCACTCCTTTTGCCTCTGGCAGTAATTTCGATTTCAGCACTTCCAAGCTGCAGGCATCGGCCCCAGAATTTGTGCCTAATTTTGCTAAGCTTAGTTTGAATGCTTCAGCAGCAACGGAGACGAATTTGGGATTGGGATTACAGTTGCCTAGtttgagcaacagcagcaaccaacaCAGTCACAACCAAAACCACagcaaatacaataacaataccAACAGCACTGCCATTCCTGGAAATAATGAAATACCCAACGATTCTCTAACTATGAataatcatcatcaccatcattatcatcaacaAGGTTCGTTGACAAAGCCACATAGCTCAAACAGTCGTCAGCAGCGGCGCAACGATTACCGGGAAGATCGAATTGAGCGCAACGAGGATCGCCCTGATCGCAAGAAGCCGCAGAAGCAACAGCGCTATGACAATCATAGAAGCAATAAAAGACGCGACGACTGGAATCGCAATCGAGATCGCATCAATGGTTATCCACGTGCTACTGAAGAGCTTGACACAAGCAATAGCAACGATAGCGCACATCCATCGCCggagaagcaacaacagcaacaaatatctCCGAGACGTGCCGGACCGGACAACGAAAAGTTGTCTCAGCGAGAGAAACTGATGCGTGACATTGAGCAAAGGCGTCTAGAGTGCCTAGTATGCGTGGAGCAAATCAAGGCACATCACGGCACTTGGTCATGCCAGAACTGTTATCATGTGCTCCATCTCAAGTGCACGATCACTTGGGCCAGCAGCTCTAAGTCAGCAGAGGGCTGGCGCTGTCCAGCGTGTCAGAACGTGTTGCAGGAATTGCCACGCGAGTATTTGTGCTTCTGTGGCAAGCTCAAGAATCCACCATTGACGCGAACGGAGTTGGCGCATAGCTGTGGCGAACTCTGCTGTCGTGCCGAGGGCTGCAGCCATGCGTGCACTTTGCTTTGCCATCCGGGGCCTTGTCCGCCATGCCAAGCAAATGTGAGtcgcagctgtggctgtggtcGCACCAGCAAACTAATGCAGTGCTCTATGAAGACTCCATTGCAGTGCGAAGCTATTTGCGAAAAGTTGCTCAACTGCAGTGAACATCGATGCCAACAACTCTGCCATGCGGGCAAGTGCGAGCCTTGTGGggagcaagtgcagcagcactGTCACtgcggcaagcagcagcgaGGCGTGCTTTGCACGAAAGAGAGCCAGGACAAGCGCAGCTATTCGTGCAAGGAATGCTGTGGCAAACCGCTGCCCTGTGGCAATCACAAATGCAAGGATTCATGCCACGCTGGCGCATGTCGTCCCTGCAAGCTCAGCCCTACTCAAATCACCAGTTGCCCATGCGGAAAGCTTTCGGTTGCTATAGAGCAGCGAGTTAGTTGCCTTGATCCTGTGCCTACCTGTGAGAGCGTGTGTGGTAAGACTCTACGATGTGGAAAGCCGGCACATCCTCATCAATGCACGAGCAAGTGTCACTTGGGACAATGCCCGCCGTGTCCCAAGCTGACTGCCGTCAAATGCCGCTGTGGGCATATGGATCAGATGATTAAGTGTCGACAGTTATCATCGCGAGCGGACGATGCCCGGTGCAAGCGACGGTGCACCAAGAAACGTAGTTGCGGCAAGCACAAATGCAACGCCGAATGCTGCATTGATATCGATCACGCCTGCCCGTTGCCTTGCAATCGCACATTGAGCTGTGGACGCCACAAATGCGACCAACCGTGTCATCGCGGCAACTGTCCACCTTGCTATCGCAGCAGTTTTGAAGAGCTCTACTGCGAATGCGGTGCGGAAGTCATCTACCCACCTGTGCCTTGTGGCACAAAGAAACCTATCTGCAAAAGACCATGCTCTCGCACTCACGGATGTGAACATACGCCGCAGCACAATTGCCATGCGGCGGCCACTTGCCCGCCCTGCATGATGTTCACGACGAAATGGTGTCATGGCAATCATGAGCAACGCAAGACCATTCCTTGCTCGCAGCTTAGCTTTAGTTGCGGTCTGGCTTGTGGGAAGCCCCTTGCCTGTGGGCGTCACAAATGTATTCGACCATGCCACGAGGGCGATTGCCAGCAACCTAGTGAAGTGTGCCGCCAAAACTGCACCAAGCCTCGTGCACTTTGTGGACACAAGTGTGCCGCATCCTGCCACGAAGGTGATTGTCCAGAGACGCCGTGCAAAGAGCTTGTCGAGGTGCAGTGCGAATGCGGAAATCGGAAGCAAAACCGCAGTTGTCAGGAGCTGGCTAGAGAACACAGTCGGATTGCAACCGCCCAGTTGGCATCCTCAATGGCGGAAATGTCTCGTGGTAACTACATGGAACTTAGCGAAATTTTAGCGCCcgcaaaaacaagcaaatcaaacaaaacATTGGACTGTAATGAGGAGTGTCGCTTATTAGAGCGCAATCGTCGGCTGGCTATTGGCTTGCAATCACGCAACCCGGACACACAGTTGAAATCACTCACCAAGTACTCGGAATTCGCACGGGGATTCGCCAAACGCAATCCAGCTTTGACCAAGAGTGTCTATGAGACGTTAAGCGATTTGGTGAAGCTAGCCAAGGAAAGCAAGCAGAAGTCGAGAAGTCACTCATTTCCTACCATGAACCGCGAGAAGCGACAACTGGTACATGAGCTGTGCGAGGTGTTTGGCGTTGAGTCCGTTTCTTATGACAAGGAGCCCAATCGCAATGTGGTTGCGACGGCGCACAAGGAGCGTTGTTGGTTGCCGGCCACTAGCATTATGGAGGTCTTGGCTCGTGAGTCGGGGCAACGTCGTGTCCCAGTTCCAAGTAATAACGCCTGGGGCCTCAAAAAGTAG
Protein Sequence: MADYWQQQQQPQQLPVNVLGDDLAARDESAATCNGGNGGNSANGGSAVPIATGNNNNNYVNFNQFITQHNLSSSNLSYSIGGGGGAFGLTPNSNSNTSFGGVNSQILFGFQNGDGTAASGNVGSFHNYQGSSRHSNAYSTIDSTPFASGSNFDFSTSKLQASAPEFVPNFAKLSLNASAATETNLGLGLQLPSLSNSSNQHSHNQNHSKYNNNTNSTAIPGNNEIPNDSLTMNNHHHHHYHQQGSLTKPHSSNSRQQRRNDYREDRIERNEDRPDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRATEELDTSNSNDSAHPSPEKQQQQQISPRRAGPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRAEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCSMKTPLQCEAICEKLLNCSEHRCQQLCHAGKCEPCGEQVQQHCHCGKQQRGVLCTKESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLSVAIEQRVSCLDPVPTCESVCGKTLRCGKPAHPHQCTSKCHLGQCPPCPKLTAVKCRCGHMDQMIKCRQLSSRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHTPQHNCHAAATCPPCMMFTTKWCHGNHEQRKTIPCSQLSFSCGLACGKPLACGRHKCIRPCHEGDCQQPSEVCRQNCTKPRALCGHKCAASCHEGDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTSKSNKTLDCNEECRLLERNRRLAIGLQSRNPDTQLKSLTKYSEFARGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00589933;
80% Identity: -