Basic Information

Gene Symbol
crm
Assembly
GCA_008042675.1
Location
VNJU01006435.1:53450-56825[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.7e-08 8e-05 22.6 0.0 2 44 114 169 113 171 0.93
2 2 2.4 2.5e+03 -1.4 0.0 9 25 293 309 292 315 0.89

Sequence Information

Coding Sequence
ATGGAGGACCCGTGCAAGCAGCCGCCaacgccaccgccaccaccaccaccgccgccgccgccgccgccgcccccgGCGCTTAACCACGACGAAGAGTCGCTGTCGAATGCAAAGGGAGTGCACTTTAAGCTGCAGAGCCTgcagccggaggaggagctcCTGGGCTCGGTGACCACCCACAACTGTCCGGGAACGCGGGCGAGCGCACGAGTTATCCAGAAGATGAAGCAGGACCAGACCAGGCCCATGACGCCGCCGCCCAGCGAGCGGGAGCACAGCAAAAAGGATGAGAAGGCCGCCCAGAAGACGCCGTCGCAGCTGAAGGCCGGCAATGGGAAGACCACCTGGACGAATGTGGAGCGCAACTGTTTCTTCGATGCCCTCAACGAGTTTGGCAAGGACTTTGAGGCGGTGGCCAACTGTATAAATGCCAAGCTGAAACGCCGCAATGCCAGCAGCGATTACAGCTTCAAGACAAAGGATCAGGTTCGTCAGCATTACTATCAGACCTATCACAAGATCTGCAAGTATGTGCGCTATTCGGAAGAGCTCAAGAAGCCCGCCCAGGAGCTGTACACGTTGATCAACTATGGCGAAATGCGACGCAAGCTGCAGTTCCTCACCGAGAAGCATTTCATGAAGCTGAAGCAGCTGGTTTACCAGGGCCAAATCACCGTACGCTGCAAGGGCAAGAATATTCGCATCAAAACGCCATCCTGCAAGGCACTACGGCGGCTCAATCAACTGGATGATTCCCTTGAGGATATCCGATTGCCCAGCAAGGTGGAGGTGCTGGTGACGCCCGCCAATATGGAGGCCTTCGGTCGGGTTCAATCCCTCGCCCAGAATCCGCGCGGCAGGATCATTGTACCGCTTCACAAGAAGCTCATCAGTTTCATTAAAACGTTCGAGTACAAATGGCGCAGTGCAAATCAGCGTTTGAATGAGGAAAAGTCTATATTCTGTCCTCTTCCCGCTTCGGCTGAACCGGAGCCCTCACCAGTTGTGGTCTCTGTAACAGTGCCAGTGCCCAGTTCTTCTGCATCCCTGGATCCTTCGCTGTGCTTCCAGCCGCGACCTGGCGTGGCCATTCATCGGCCGCTGCTAAGCATCACCGCCTATTTGAGCAGTATCAACATTTGCCTGTCCGCCTACGAAGAACGTTTGGGCTTCAAGGTGCGCAGCGAAACGTTGGGCAACCTGCCCGGCCTTCCGATGACGGCCAACAAAAGGCCCAGAACGGAAAGTGGTTCCGAGAAGCGTTCGCCGGAATCGAAGAAACCCAAATCGGGCGCTAGCCCGGCGTTGGAGAAGAGCTTGGACGATGTGCCTTTGGAGGGGGTGAATCATGTGAAGCTCGAGAATAGCAGCGGCGATGAATTGGGCGAGGAGATACAGGAGTTTCTCGGTGACCTGGAGGCAGCAGTTCAAACTCAGGCCACGCCGGCACCAGCGCCAGTCGAAGCACCAGCTCTGCAGTCTGATTCCAGCGAGACGCCAATTGATACGGATCCTCCTTGTGCATCACAAACCTCACCCTTGCCGCTACAAACTCaggcgcctgctgctgctgctgctgctgctgctgctgtcccacCGCCAGCTCCCGTCACCCCGGCAACTGCACCCTTGGCCCGGTCCAAACGGAAAGAGGCCAAGGAAGCGGCAGCCGCCGCGCAAGCTCGCAACTTCAAGCCGCTGCTTAGTGATGAGATCTTGAAGAGAATACGCAAGGGCTGGACCGTGGCAAATGCGGCGGATATAACCATTGGTGATCTGTATGTGGTTCTGGGTCAGGACTCGAAGCTCGAGCTGGAGTACTATTGGTGTGAGATGGAGAACATGCCGCCAGTTGCCGCGACAGCGACTTGCTCGAATTCCATAACAACAAACTCGTCTTCCTTGGCAGTCACTTCCGTCACCTCGGCCACAGTGGCCACTCAAACGGGCAACTGCTCCAttgccacctcctcctcctgctccagcagcagccttCAAGCTCCCAGCTCTTCCACTGCCTCAGCCATCAGCACCTCCAGCAGCACCtctaacaacaataataacaacccCCTGATTACTGCGAGCACCTCGCTGCCCTACAATCCCAACGACTGTGATAGCGTGGAGCGCGTCAAGGCCGTCACCACATCCTCGGTGAGCAACAAGCTGAAgcatctgctgctggtggccaaTCTCAGTGAGCGTGTACGCAAACGGCAATGCAACTGTGGCCATACCTGCGACCGGAAACGGGATCTGATGACCAAAGCACAGCAGCTGGCGGATGCAGCGGCCGCCGGTGGTGTTGCAGATGGTGCCAACTTTCGGACTCCAATGCTGCCGGTAAGGCGGCCAATAGCCAACATCATTGATCCCGTCAGGCAACTGTCAGCGCTCACCCGCCAGAAGATCAGTCGACAGGTGCTCGTGCAGCGTCGCCTTTTGCCGCCCGCTTCCGTTGGCGGTCGTCCTTACGATCTGCTCAGTGTGCGTCAACTTCATAGCGGGCTCTTTGAGCCAATCGATCGTCTTGGTGGCAGCAGTAGCAATTCGAGTGGCATAAGCTCTGGCTCCGGCCAGAGTGCAGCGTTGTCCGCTGGCCAGGCGGCAGGCAGCGATGTGCACAGGCAGGGGGACAAGGGGGAGGCACAGGCACTGCAATTCAGCAACGAGATCAGGAGTCAACAGGGCGACAGCAGTCGGGATATGCCTAATCTGGATTTTTGTGTGGCAACCAGCACCACAAGCGATGGCAGAACTTTCAGCACCGATGAAGTTCAGGATGAGAGCTTAACTCAAAACTTCTTCCATGGCAGCGTTAGTCCAATGCACTTGCTCAGAGACTCAACTTCCAATGCCCGTTGGCTGGAGGATAATATCAATGATTTCTCGCTAACATCACTGCTGGGGCATCTGGACGAGATTGATGCCACCAGGGATATACTGGATCCCTCATCCAGCATGTCGGTGCTTAGTGAGAGCAGCGTTGACTTTCGTCACAAATTCCAGGAGATTGCCgccctgctgcagcagcaggagaaggatTAG
Protein Sequence
MEDPCKQPPTPPPPPPPPPPPPPPPALNHDEESLSNAKGVHFKLQSLQPEEELLGSVTTHNCPGTRASARVIQKMKQDQTRPMTPPPSEREHSKKDEKAAQKTPSQLKAGNGKTTWTNVERNCFFDALNEFGKDFEAVANCINAKLKRRNASSDYSFKTKDQVRQHYYQTYHKICKYVRYSEELKKPAQELYTLINYGEMRRKLQFLTEKHFMKLKQLVYQGQITVRCKGKNIRIKTPSCKALRRLNQLDDSLEDIRLPSKVEVLVTPANMEAFGRVQSLAQNPRGRIIVPLHKKLISFIKTFEYKWRSANQRLNEEKSIFCPLPASAEPEPSPVVVSVTVPVPSSSASLDPSLCFQPRPGVAIHRPLLSITAYLSSINICLSAYEERLGFKVRSETLGNLPGLPMTANKRPRTESGSEKRSPESKKPKSGASPALEKSLDDVPLEGVNHVKLENSSGDELGEEIQEFLGDLEAAVQTQATPAPAPVEAPALQSDSSETPIDTDPPCASQTSPLPLQTQAPAAAAAAAAAVPPPAPVTPATAPLARSKRKEAKEAAAAAQARNFKPLLSDEILKRIRKGWTVANAADITIGDLYVVLGQDSKLELEYYWCEMENMPPVAATATCSNSITTNSSSLAVTSVTSATVATQTGNCSIATSSSCSSSSLQAPSSSTASAISTSSSTSNNNNNNPLITASTSLPYNPNDCDSVERVKAVTTSSVSNKLKHLLLVANLSERVRKRQCNCGHTCDRKRDLMTKAQQLADAAAAGGVADGANFRTPMLPVRRPIANIIDPVRQLSALTRQKISRQVLVQRRLLPPASVGGRPYDLLSVRQLHSGLFEPIDRLGGSSSNSSGISSGSGQSAALSAGQAAGSDVHRQGDKGEAQALQFSNEIRSQQGDSSRDMPNLDFCVATSTTSDGRTFSTDEVQDESLTQNFFHGSVSPMHLLRDSTSNARWLEDNINDFSLTSLLGHLDEIDATRDILDPSSSMSVLSESSVDFRHKFQEIAALLQQQEKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2