Dbir014544.1
Basic Information
- Insect
- Drosophila birchii
- Gene Symbol
- crm
- Assembly
- GCA_008042755.1
- Location
- VNKA01001209.1:140021-143407[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-08 9e-05 22.6 0.0 2 44 102 157 101 159 0.93 2 2 2.5 2.8e+03 -1.4 0.0 9 25 281 297 280 303 0.89
Sequence Information
- Coding Sequence
- ATGGAGGACCCGTGcaagccgccgccaccgcccacGGCACTTTCCCACGACGAGGAGTCGTCTCTGCCGAATGCGAGGGCAGTGCACTTCAAGCTTCAAGGCCTGCAGCCAGAGGAGGAGTTGCTAGGCTCCGTGACCATGCACAACTGCCCGGGAACGCGTGCCAGCGCACGCGTTATCCAAAAGATGAAGCAGGATCAGACCAGGCCCATGACGCCGCCGCCCAGCGAGCGGGAACACAgcaagaaggaggagaaggccGCCCAGAAAACGCCGTCACAGCTAAAGTCTGGCAATGGGAAGACCACCTGGACGAATGTGGAGCGCAACTGCTTCTTCGATGCCCTCAACGAGTTTGGCAAGGACTTCGAGGCGGTGGCCAACTGCATCAATGCCAAGCTGAAGCGTCGCAATGCCAGCAGCGACTACAGTTTTAAGACGAAGGATCAGGTTCGCCAGCACTACTACCAGACCTATCACAAGATCTGCAAGTACGTGCGCTATTCGGAAGAGCTCAAGAAGCCCGCCCAGGAGCTGTATACGTTGATCAACTACGGCGAGATGCGACGGAAGCTGCAGTTTCTCACTGAGAAGCACTTCATGAAGCTCAAGCAGCTGGTTTACCAGGGCCAAATTACCGTTCGCTGCAAGGGCAAGAATATTCGGATCAAGACGCCATCCTGCAAGGCACTGCGGCGTCTCAATCAACTGGATGACTCTCTTGAGGATATCCGGCTGCCCAGCAAGGTGGAGGTGCTGGTGACGCCCGCCAATATGGAGGCCTTCGGTCGGGTGCAGTCCCTGGCCCAGAATCCGCGCGGCCGGATCATTGTACCGCTACACAAAAAGCTCATTAGCTTCATCAAAACGTTCGAGTACAAATGGCGCAGTGCCAATCAGCGTTTGAACGAGGAAAAGTCAATCTTCTGTCCGCTTCCCGCCCCTCCCTCTGCTGCCGCTGACCCGGAGCCAGCACCGTCACCAGTGGCACCACCTGTCTCAGTGCCAGTGACAGTCCCACCAGCATCAGTTGCATCTCTGGATCCTTCGCTATGCTTCCAGCCGCGACCTGGCGTGGCCATCCATCGGCCGCTGCTGAGCATCACCGCCTATTTGAGCAGTATCAACATCTGTCTGTCCGCCTATGAGGAGCGTTTGGGCTTCAAAGTGCGCAGCGAGACACTGGGCAACCTGCCCGGCATTCCGGTAACGGCCAGCAAGAGGCCCAGGACGGAAAGTGGCTCCGAGAAGCGATCCCCGGAATCGAAGAAACCGAAATCGGGCACCAGTCCGATGTTGGACAAGAGCTTGGATGAGGTGGCTTTGGAGGGGGGCAATCATGTGAAGCTCGAGAATAGCAGTGGCGATGAATTGGGCGAGGAGATACAGGAGTTCCTTGGTGACCTGGAGGCTGCAGCTCAGGCTCAGGCCGCGAATCTGGTGATCTTGCCGACGGCGGCACCAACCGAAACGTCAGCTCTTCAGCCCGATGCAAGCGAGGCGCCGCCAACTGATATGGATCATGGTGCGTCACGGACCTCTCCCTTGCCAACTCAACCGCCTGCTGCCCCGCCGCCAGCACCTGTCACCCCGGCATCTGCACCCTTGGCCCGGTCCAAGCGGAAAGAGGCCAAAGAAGCGGCAGCCGCTGCCCAAGCTCGCAACTTTAAGCCTCTGCTCAGCGATGAGATCCTTAAGAGAATCCGCAAAGGCTGGACAGTGGCGAATGCGGCGGATATAACCATTGGTGATCTTTATGTGGTTCTTGGTCAGGACTCTAAGCTCGAGCTGGAGTACTACTGGTGTGAAATGGAGAACATGCCGCCAGTCGTCTCGACAGCGACTTCCTCGAATTCCATAACGACAACAAACTCGTCTTCCTCGGCAATCACCTGCACCTCCGCTACAGTGGCCACTCAAACGGGCACTTCCTCTTCCAGCAGCCTTCAAACCCCAACCTCAAACAAtgccgtcgccgccgccaaCATTaacaccaccatcaccacctccaccaccaacaacaacaacaacaatcccCTGATcacggccagcagctcgcTGCCCTACAATCCCAACGACTGTGATAGCGTGGAGCGCGTCAAGGCCGTCACCACATCCTCGGTGAGCAACAAACTGAAgcatctgctgctggtggccaaTCTCAGTGAGCGTGTACGCAAGCGTCAGTGCAATTGCGGCCACACCTGTGACAGGAAGCGCGACCTGATGACCAAGGCGCAGCAGCTGGCGGATGCGGCAGCCGCGGGGGGAATTGGGATACCTGGCATGATCGGGGCCAGCGGTGATGGCGGCAACTTTCGCACCCCAATGCTACCGGTGAGGCGGCCGATAGCTAATATCATTGATCCTGTCAGGCAGCTGTCGGCGCTTACCCGGCAAAAGATCAGTCGCCAGGTGCTCGTGCAGCGTCGCCTCCTGCCCCCCGCTTCCGTCGGTGGTCGTCCGTACGATCTGCTCAGTGTGCGCCAACTACATAGCGGCCTCTTTGAGCCCATCGATCGCCTTGGCGGCAACAGTTCCAGTGGCATAAGCTCCGACTCCAGCTCCTATTCGGGCCAGAGTACAGTGACACCTTCTGGCCAGGCGTCAGGCAATGATGCACACCGGCAAGGGGACAAGGGGGGTCCACAGGCATTGCAGTTCGACGACGAGGGCAGGAGTCAACAGGGCGGCAGTCGGGATATGCCCAATCTGGATTTTTGTGGCACCAACGATGGCAGAACTTTCACTACTGATGAAATCCAGGATGAGAGCACAACTCAAAACTTCTTCCATGGCAGCGTAAGTCCAATGCACTTGCTACGAGACTCAACCTCCAATGCCCGTTGGCTGGAGGATAATATCAATGATTTCTCGCTAACATCTCTGTTGGGGCACCTGGACGAGATTGATGCCACCAGGGATATATTGGATCCCTCATCGAGCATGTCGGTGATTAGTGAGAGCAGCGTAGACTTTCGGCACAAGTTCCAGGAGATTGCCgccctgctgcagcagcaggagaaggattAA
- Protein Sequence
- MEDPCKPPPPPTALSHDEESSLPNARAVHFKLQGLQPEEELLGSVTMHNCPGTRASARVIQKMKQDQTRPMTPPPSEREHSKKEEKAAQKTPSQLKSGNGKTTWTNVERNCFFDALNEFGKDFEAVANCINAKLKRRNASSDYSFKTKDQVRQHYYQTYHKICKYVRYSEELKKPAQELYTLINYGEMRRKLQFLTEKHFMKLKQLVYQGQITVRCKGKNIRIKTPSCKALRRLNQLDDSLEDIRLPSKVEVLVTPANMEAFGRVQSLAQNPRGRIIVPLHKKLISFIKTFEYKWRSANQRLNEEKSIFCPLPAPPSAAADPEPAPSPVAPPVSVPVTVPPASVASLDPSLCFQPRPGVAIHRPLLSITAYLSSINICLSAYEERLGFKVRSETLGNLPGIPVTASKRPRTESGSEKRSPESKKPKSGTSPMLDKSLDEVALEGGNHVKLENSSGDELGEEIQEFLGDLEAAAQAQAANLVILPTAAPTETSALQPDASEAPPTDMDHGASRTSPLPTQPPAAPPPAPVTPASAPLARSKRKEAKEAAAAAQARNFKPLLSDEILKRIRKGWTVANAADITIGDLYVVLGQDSKLELEYYWCEMENMPPVVSTATSSNSITTTNSSSSAITCTSATVATQTGTSSSSSLQTPTSNNAVAAANINTTITTSTTNNNNNNPLITASSSLPYNPNDCDSVERVKAVTTSSVSNKLKHLLLVANLSERVRKRQCNCGHTCDRKRDLMTKAQQLADAAAAGGIGIPGMIGASGDGGNFRTPMLPVRRPIANIIDPVRQLSALTRQKISRQVLVQRRLLPPASVGGRPYDLLSVRQLHSGLFEPIDRLGGNSSSGISSDSSSYSGQSTVTPSGQASGNDAHRQGDKGGPQALQFDDEGRSQQGGSRDMPNLDFCGTNDGRTFTTDEIQDESTTQNFFHGSVSPMHLLRDSTSNARWLEDNINDFSLTSLLGHLDEIDATRDILDPSSSMSVISESSVDFRHKFQEIAALLQQQEKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00593776;
- 90% Identity
- iTF_00477959; iTF_00541012;
- 80% Identity
- -