Basic Information

Gene Symbol
crm
Assembly
GCA_008042555.1
Location
VNJP01002447.1:67238-70733[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.5e-08 0.00012 22.7 0.0 2 44 118 173 117 175 0.93
2 2 3.5 4.4e+03 -1.5 0.0 9 24 297 312 296 313 0.90

Sequence Information

Coding Sequence
ATGGAGGATCCGTgtaagccgccgccgccaccgccactgcCGACCCCGGCCCCGGCCCCGGCACTTAACCACGACGaagagtcgtcgtcgtcgtcgtcgctgctgttgctgccgaaTGCCAAGGGAGTGCACTTCAAGCTGCAAAGCCTACAGCCAGAGGAGGAACTCCTGGGCTCAGTGACCACCCACAACTGTCCGGGAACGCGGGCCAGTGCGCGAGTTATCCAAAAGATGAAGCAGGATCAGACCAGGCCCATGACGCCGCCGCCCAGCGAACGGGAGCACAgcaaaaaggaggaaaaggcTGCGCAGAAAACGCCTTCACAGCTGAAGGCCGGCGGCAATGGAAAGACCACCTGGACGAATGTGGAGCGCAATTGTTTCTTCGATGCCCTCAATGAGTTTGGCAAGGATTTCGAGGCGGTGGCCAATTGCATTAATGCCAAGCTGAAGCGTCGCAATGCCAGCAGCGATTACAGCTTTAAGACAAAGGATCAGGTTCGCCAGCATTATTATCAGACTTATCACAAGATCTGCAAATATGTGCGCTATTCGGAAGAGCTCAAGAAGCCCGCCCAGGAGCTGTACACGTTGATTAACTACGGCGAAATGCGACGCAAGCTGCAGTTCCTCACGGAGAAGCATTTTATGAAGCTGAAACAGCTGGTTTACCAGGGACAAATCACTGTGCGCTGCAAGGGCAAGAACATACGTATCAAAACGCCTTCCTGCAAGGCACTCAGGCGGCTGAATCAACTGGATGATTCCCTTGAGGACATACGATTGCCCAGCAAAGTAGAGGTGCTGGTGACACCCGCCAATATGGAGGCCTTCGGTCGGGTTCAATCTTTGGCCCAGAATCCGCGCGGCAGAATCATTGTTCCGCTGCACAAGAAGCTCATCAGTTTCATTAAAACGTTCGAGTACAAATGGCGCAGTGCAAATCAGCCCTCTCTGGATCCTTCGCTGTGCTTCCAGCCGCGACCTGGCGTGGCCATTCATCGTCCCCTGCTGAGCATTACGGCTTACTTAAGCAGCATTAACATTTGTCTCTCCGCCTACGAAGAACGTTTGGGCTTTAAAATACGCAGCGAGACATTGGGCAACCTGCCTGGCATTCCGGTGGCGGCCAGCAAGAGGCCCCGGACGGAAAGTGGTTCCGAGAAGCGTTCCCCGGAATCCAAGAAACCCAAATCGGGTGCTAGTCCAGCGTTGGAGAAGAGCCTGGACGATGTGCCTTTGGAGGGAGTGGCTAATCATCATGTGAAGCTTGAGAATAGCAGTGGCGATGAATTGGGTGAGGAAATACAAGAGTTTCTGGGTGACCtggaagctgcagcagctctgCCAGAGGCCAAGGAagcggctgccgctgcccaaGCTCGCAACTTCAAACCCCTGCTCAGTGATGAGATCCTAAAGAGAATCCGCAAAGGCTGGACCGTGGCAAATGCGGCGGATATAACCATTGGTGATCTGTATGTTGTTCTTGGGCAGGACTCGAAGCTCGAACTGGAGTATTACTGGTGTGAAATGGAGAATATGCCGCCAGTTAGCGCGACAGCAACATCCTCGAATTCCATAACAAACAACTCGTCTTCCTTGGCAGCCAGTTCCGCCAGCTCCGCCTCCACCTCAGCCACAGTGGCCACTCAAACGGGCACGGGCACCTCCGCCTCTTCCAACTCCTCCTTTTCCAGCAATCttcaaactccaacttcttccACTGCTGGCAACATCACCAACACCTCCACTAACATTAACAACAACCCCCTGATCACTGCAAGCACCTCGCTGCCCTACAATCCCAACGACTGTGATAGCGTGGAGCGCGTCAAGGCCGTCACCACATCCTCGGTGAGCAACAAACTGAAgcatctgctgctggtggccaaTCTCAGTGAGCGTGTGCGCAAGCGTCAGTGCAACTGTGGCCATACCTGCGATCGGAAGCGGGATCTAATGACCAAAGCCCAGCAGCTGGCGGATGCGGCAGCCGCTGGCGGTATTGGCATACCAGATGGTGCCAATTTTCGCACTCCAATGCTGCCGGTGAGGCGGCCAATAGCCAATATCATTGATCCTGTGAGGCAGCTCTCAGCGCTCACACGCCAAAAGATCAGTCGCCAGGTGCTCGTTCAGCGTCGCCTTTTGCCTCCTTCCGCTTCCGTTGGCGGTCGTCCTTACGATTTGCTCAGTGTGCGTCAACTTCATAGCGGTCTCTTTGAGCCAATCGATCGGATCGGTGGagttggcagcagcagcagttccagttccagtggCATaagctccggctccagctcctaTTTGGGTCAGGGTGCAGCGATGTCCTCTGGCCAGGCGGCAGATACAAACGTTACACACAGGCAGGGAGACAAAGGAGAGTCACAGCAGCCTTTGCAGTTCGTGGACGAAAGCAGAAGTCAACAGGGCGGTGGCGGTCGGGATATGCCCAATTTGGATATTTGTGTGGcaaccagcaccaccagcgaTGGCAGAACTTTCACTTCAAATGAAGTTCAGGATGAGAGCACAACTCAAAACTTCTTCCATGGCAGCGTAAGTCCCATGCATTTGCTACGAGACTCCACCTCCAATGCCCGTTGGTTGGAGGATAATATCAATGATTTTTCGCTAACATCGCTGCTGGGGCACTTGGATGAAATAGATTCTACCAGGGATATATTGGATCCCTCATCCAGCATGTCGGTGATTAGCGAAAGCAGCGTTGACTTTCGTCACAAGTTCCAGGAAATTGCCGCcttgctgcagcagcaggagaaggatTAG
Protein Sequence
MEDPCKPPPPPPLPTPAPAPALNHDEESSSSSSLLLLPNAKGVHFKLQSLQPEEELLGSVTTHNCPGTRASARVIQKMKQDQTRPMTPPPSEREHSKKEEKAAQKTPSQLKAGGNGKTTWTNVERNCFFDALNEFGKDFEAVANCINAKLKRRNASSDYSFKTKDQVRQHYYQTYHKICKYVRYSEELKKPAQELYTLINYGEMRRKLQFLTEKHFMKLKQLVYQGQITVRCKGKNIRIKTPSCKALRRLNQLDDSLEDIRLPSKVEVLVTPANMEAFGRVQSLAQNPRGRIIVPLHKKLISFIKTFEYKWRSANQPSLDPSLCFQPRPGVAIHRPLLSITAYLSSINICLSAYEERLGFKIRSETLGNLPGIPVAASKRPRTESGSEKRSPESKKPKSGASPALEKSLDDVPLEGVANHHVKLENSSGDELGEEIQEFLGDLEAAAALPEAKEAAAAAQARNFKPLLSDEILKRIRKGWTVANAADITIGDLYVVLGQDSKLELEYYWCEMENMPPVSATATSSNSITNNSSSLAASSASSASTSATVATQTGTGTSASSNSSFSSNLQTPTSSTAGNITNTSTNINNNPLITASTSLPYNPNDCDSVERVKAVTTSSVSNKLKHLLLVANLSERVRKRQCNCGHTCDRKRDLMTKAQQLADAAAAGGIGIPDGANFRTPMLPVRRPIANIIDPVRQLSALTRQKISRQVLVQRRLLPPSASVGGRPYDLLSVRQLHSGLFEPIDRIGGVGSSSSSSSSGISSGSSSYLGQGAAMSSGQAADTNVTHRQGDKGESQQPLQFVDESRSQQGGGGRDMPNLDICVATSTTSDGRTFTSNEVQDESTTQNFFHGSVSPMHLLRDSTSNARWLEDNINDFSLTSLLGHLDEIDSTRDILDPSSSMSVISESSVDFRHKFQEIAALLQQQEKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00593776;
90% Identity
-
80% Identity
-