Dsal004115.1
Basic Information
- Insect
- Drosophila saltans
- Gene Symbol
- bab1
- Assembly
- GCA_018903575.1
- Location
- JAEIGH010000001.1:13552953-13556056[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-18 9e-15 54.7 0.0 1 43 55 98 55 100 0.95 2 3 2 6e+03 -2.4 0.2 7 18 182 192 181 192 0.81 3 3 0.18 5.2e+02 1.0 0.0 15 23 212 220 204 222 0.88
Sequence Information
- Coding Sequence
- ATGATGGAGAATTCTCATGCCTGGATGGGCGCCACCGGATCAACACTGGCAGCAGATAGCTATCAATATCAATTGCAATCGATGTGGCAAAAATGCTGGAACACCAATCAAAACCTAATGCATCATATGCGATTCCGGGAACGTGGACCATTGAAATCTTGGCGACCGGAAACAATGGCCGAGGCCATATTTAGTGTCCTCAAGGAGGGTCTCTCCCTATCGCAGGCAGCACGAAAATATGATATACCGTATCCCACCTTTGTTCTATATGCAAATCGTGTCCATAATATGTTGGGACCATCCATTGATGGTGGTCCCGATCTGAGGCCCAAAGGCCGCGGTAGGCCACAACGTATTCTTCTGGGCATTTGGCCGGATGAGCATATCAAGGGTGTCATTAAGACTGTGGTATTCCGGGATGCCACCAAAGACATGAAGGATGATAGTACTCTGGGTGGACTCGGTGCTCATATGCCGCCCTATGGTCGTCATTCGCCCGTATTTCCTTTGCAGGATATGAGCCTAAGTTATCCGGGAGCTAGTGCCGCAGCGCTAGCTTGTTCAAATGGAATGGGCGGCGGTGGAGCTGGTGTGGGGGGCGGACCATCTGTTGTTGGCCCTGGCCCGGATCAGGGGCAAATGTCACAGGAGACGGCAGCTGCTGTCGCTGCTCCCAGTCAGGATTGGATTATGTAA
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDATKDMKDDSTLGGLGAHMPPYGRHSPVFPLQDMSLSYPGASAAALACSNGMGGGGAGVGGGPSVVGPGPDQGQMSQETAAAVAAPSQDWIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00604011; iTF_00600237;
- 90% Identity
- iTF_00604011; iTF_00600237;
- 80% Identity
- -