Dstu009251.1
Basic Information
- Insect
- Drosophila sturtevanti
- Gene Symbol
- bab1
- Assembly
- GCA_018150375.1
- Location
- JAECWJ010000594.1:4396945-4400467[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-18 6.3e-15 54.5 0.0 1 43 55 98 55 100 0.95 2 2 2.2 4.1e+03 -2.5 0.2 7 18 182 192 181 192 0.81
Sequence Information
- Coding Sequence
- ATGATGGAGAATTCTCATGCCTGGATGGGTGCCACCGGATCAACGTTGGCAGCAGATAGCTATCAATATCAATTGCAATCGATGTGGCAAAAATGTTGGAATACAAATCAAAATTTAATGCATCATATGAGATTCCGTGAACGTGGACCATTGAAATCGTGGCGACCCGAAACTATGGCCGAGGCCATATTTAGTGTACTCAAGGAGGGACTATCCCTATCGCAGGCAGCACGAAAATATGATATACCGTATCCCACCTTTGTTCTATATGCAAATCGTGTCCATAATATGCTTGGCCCATCAATTGATGGTGGTCCCGATTTAAGGCCAAAAGGCCGTGGCAGGCCACAACGTATTCTATTGGGCATTTGGCCAGATGAGCATATCAAGGGTGTCATCAAAACTGTCGTATTTCGTGATGCCACCAAAGATATGAAGGATGATAGTTCACTGGCTGGTCTTGGTGCTCATATGCCGCCCTATGGTCGTCATTCGCCCGTATTTCCATTGCAGGACATGAGCCTAAGCTATCCGGGAGCTAGTGCTGCGGCTCTAGCTTGTTCAAATGGGATGGGCGGTGGCGGTGGTGGTGTGGGAGGTGGTCCATCTGTTGTTGGTCCTGGACCGGATCAAGGGCAAATCCCAGCCAAGGTCGGATCATGTAAGGATGAAGTGAAGGCGTTCCAAATTGATAATTTAATTTTCGAAAATTGTTTCGAAAAGGGTTTCAAATTGTTTTAA
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDATKDMKDDSSLAGLGAHMPPYGRHSPVFPLQDMSLSYPGASAAALACSNGMGGGGGGVGGGPSVVGPGPDQGQIPAKVGSCKDEVKAFQIDNLIFENCFEKGFKLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00590892;
- 90% Identity
- iTF_00590892;
- 80% Identity
- -