Dqui007355.1
Basic Information
- Insect
- Drosophila quinaria
- Gene Symbol
- -
- Assembly
- GCA_035047525.1
- Location
- JAWNPO010000384.1:2963734-2970155[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.015 1.2 10.1 0.2 1 23 1337 1360 1337 1360 0.95 2 13 8.8 7e+02 1.4 0.2 1 23 1526 1548 1526 1548 0.91 3 13 0.0002 0.016 16.0 2.7 2 23 1551 1572 1551 1572 0.97 4 13 7.6e-05 0.0061 17.3 0.2 3 23 1580 1600 1578 1600 0.98 5 13 6.3e-07 5.1e-05 23.9 4.1 2 23 1607 1628 1606 1628 0.97 6 13 6 4.8e+02 1.9 0.4 5 23 1641 1659 1639 1659 0.96 7 13 1.5 1.2e+02 3.8 5.4 3 23 1666 1687 1664 1687 0.93 8 13 0.16 13 6.9 0.2 2 23 1698 1718 1697 1718 0.96 9 13 2e-05 0.0016 19.2 0.6 1 19 1724 1742 1724 1746 0.95 10 13 1.7e-05 0.0014 19.3 0.5 1 23 1754 1776 1754 1776 0.98 11 13 0.00011 0.0091 16.8 7.6 1 23 1782 1804 1782 1805 0.96 12 13 0.00022 0.018 15.9 5.9 1 23 1810 1832 1810 1832 0.98 13 13 0.031 2.5 9.1 8.2 1 23 1838 1860 1838 1861 0.95
Sequence Information
- Coding Sequence
- atggttGACAGTGTGCAGTGTCCCGTGTGCACCTTGTACCTGCACGCGGGGATGAATCTCTCCGATCATTTGGAGACACATCCCAAGGAGCAAGTCATCAAAGCCCTGGTGCAAATGACAATCGTCGGCAACAATGCAATGGGCAGCGCCCTGGCGGCAGCTGCGACATCAGACggcgcctcctcctcctcatcaCCGCCAGATGCTGATGTGAAGCCAGGTGTGGCAGCAACGGCACCACCAGCTgaagcagcaacggcagcagcaccaccaccaccaaaaacaacgacagcaaccgcagcaacaaccacaacaacattaaAGTCAACAGCACCCAAAGCTGCAACGTTGCTGGTTAATAACaccagtggcagcaacagcagcagttgcagtaacagcaacatcaacactAACAgtaatagcaacagcaacaataataaccaATTGAGCAATCCACCGATTAAGGCAGTTAAAAGCGCGCCACCCTCGACTGAGGCGTCAGCCACCACATCCACCACACCCACCATAAGCAGCGTGGCCGCTGCCTATCCGCCATCGCTGACATCCGACTATCGCTAcgatcagcagcaacagcagcaacaacaacagcagcagcaacaacaacaacagcaggcgACGCCAACCGCAACGCTTCATGGCTTTCCACGCGGTGCTACCACAATGCTGGTAATACCACATgcaccacagcagcagcagcagcatcatttCCTGGCCACTCAACCGCCTGCTCATTTTGtccatcagcaacagcagcaacaacaacagtcggCTATGAAGTACACGTATGCAACAACGTTGCCTCCGCCACCGCCGCCTCTGCAGCTGTTTGCACCGCAGCCGACTACGGCGCAGTCGCATCAGAAGCCACCGCCCGCCTATGGCGCCGCCATCAGTCAAATTCGATCTCAGCACAACCAAAACAAGCAACATccacaccaacagcaacagcaaccacaacatcATGTAACCGTACAACATAACGTTAACCTAGCACCACCGAGTGGGAAGCATAGTAAAGCCCATACGGAGATCTTTCTGAATCCACCGCCTCCACCACCGCCACAGACGACGATGCCGTCTTCGTCAACGTCCTCGTCCgcagcagctgccgccgccgcagcCGCCCTCTCAAGGCTgcaacatccacatccacaacAGCACCAGCAATCGCTTGCAGCCGGCAGCAGCTATGCGGGAGCCAATTGCTCCAGCTCCACGTCGAGTCTGATGGCAGCGACCAGCAACGGACGAGGCAGCAGTCGCCAGTCGACCAATTCGCCATTTGGCGTACTGCTTAATGCGGCGGCGCAAGCTGCCAGCTCCTCGTCCGCCTCCTCCAGCGCATCTGTGCTGCGTTTCGCCGAATCGCCGGTTGCCCACTATCTGGAGCGGGACAATGGTGACTTTATTGTCCAGGAGACGCCCAAGCACATTGTCGAGTGCGTCGAGAAGGATGATGGCGAATTCTCAGTGATTGAGCGCATCTATCAGTCGCCACCCAGCGTGCTGCACAtccacgacgacgacgaagaaGAGGAGGAACAGAGCTGGGAAAACAGCGACGACGAGGATCACGCCAAGGCACACAACCATGTGGAGGATGGCGATGACGAGCGCGAGGACAGCCGCAGCAGAGTCGGCCTAAAGACGACAGCGAAAAAGTCGCGTAAATTCAAATCGAGTGGGCGAGTGCACAAACGTGCTTCGTCCAAGCATCGGATGGCCACAACGGAGGATGAGGAAGAGTTCATGAGTGTGGGCAGCAGTGACAACGAGGAACAGGCAGAGGAGCAACCGCAGTCGTCAGGTGGTCCAAGTGCATCGGTGACATCGCCGTCTTCGCCGCAACTTTGCACGGCGCCTTCAACGAGTAGTGGAGCGGCTGCTGCAGTTTCTGGCAGTGTCAGTTCCATGACCAGCGGTACCCTAAAGTCCAAAAAGAATCGGGTTACAGTTCTGAGCGATGTGCCGCTAAATATGAATGAGTATCTGGATCTAGTGGGCAATATTGTGGCATCGAGTCGCATTGGTGCAGCTCGTCCATTTGCCGCCGTGGCGCCCATTCCGTTGGTCAAGGTGGAAAAGGAGGAGCCGCTGGACGAGTACGACAGCGTTCCAATCGAGATTCAATCCATGGAGCACAAGCCGAGCGTGGAAAACGCAAgtggcagtagcagcagcagcagtagcaacagcagcagcaatggaCACGGCACCACCAGCGTCATACGCATGgccagcaccagcagcagcaccaatGTTCCGCCTGAGGATCTCACACAGCCGCCAGCCATGAAAGTCGAGGTGGAGCCAACAGTGCTGTTGCCACAGCGCTTCTCAGCGCCGGCGCAGCAGCGTGGACCCAAGAAATTAGTCATCAAACCAAAGGCCACAGCAACGGCGACTCCGACGAcggcaacgacgacgacggcaacaacgacgacgacgacgaaaaAGACTGATAACAATGCTGCCAGCAGTAGAAACAGCAACTGCTCCGAATCTCTCAGCATATCAAAAGCGTCTGCTGACCTGGTGCAGATCAAGAGCGAAAATGTGGAGCCAAGCACCTCGAGTGGCAGCATCCTGGAGAAGCATCTGACCACCAGCTACACTGGGCAACAGGCGCGCAAGCACTCAACAGTCAATGACGACGATGCCCGTGTCCTGTTGGAGTTCGCCAACTCGAAGCAGCTGCCGCTGGAAGGCAGCAGCAATCCCACGACATTTGTGGTGAATGCGGCCAGTTTTGCATCGGCGGGATCTGTGTTCGCCAACAGCATTCAGAGTCAGCCAATCAGGCCGGGCGAAGAGTACATTCTGCCTGATGACAACAAAGTGGAAATGGATGAAATTGTGATATCCTCCTCGTCTTCCTTTGCCTCCGCCACGCAGCaagcgcagcagcagccgcatcagcatcagcatccaCAGACAACTCCTCCGGCGGTTCAAGCTACTTTGCAGCATGTACAGCCGCCTACCTTTAATGACTTTAACTTTCTGTACCACCAAaatacaccaacaacaacgacaacgactgCTTCCAGTTTTGCACCATTCGGtcttcagcagcagcaacatcagcagcagcatcagcagcaacaacatcacgGCTCAAGTGAAGCCACGAATGCAGCGACGCTCGCCTCGTCCTCCAGTAACTCGTCAGCCTTGGATCACGAATCCTCCATGAATGCAACGTTCCGTGTGGCCAAGACACAGTCATCCCCGAGTGCGTGGTATcaaccccaacaacaacaacaacagcaatcacaATCGAACAACAATCAGAATGTGGAACAGTCGAGCAATTTTATTGCAGCCTTGGCAGCCGTCGAATGCTGCAGTGTGGCGATGGACAGTGATGCGAGTGATGCCAAGTACTTGGATCTAGATGCATGTAAGCGGGAACAGTTGAGCAATAGCAGCAGCCACTTGCCCTCTGCCTCGGCATCCACGTCTACAACGTCGTCCTcattcgctgctgctgccacggAGAGCAGTCTCGTTGGTGGCCTGGGATTAAATATACGCACTGATGAGAAGATGCCCGCCAAGGGTGAAATTTCCGAGCAGGAGAGCAACTGCGACATTGAGAACTCCTGGAGTCAGTCGATGTATGGGGACATATCACAGCGGTACTTTAAAAACCAATTCCCGGATGGCTACCATCAACAGCTGCCCGATTGGCGCCAGGACTACTATCCTGCGCAGGATCTCAGTGGTCAGCCGGAGCACCGCGAGCACAAACGATTTGACTTTAATGCGGTCGCCTCTGATTACGCGCAGCCGGGTGAGCTGGATGCCTCCTCGAGCTCCGCCAGAAGTAATCAATTGCTGGATGTGCACCCCACCACGTCCACGTCGTCATTGGCTTTGCTGGCTGGCCCACCAATAGCCTCGACATCCAGAGCGGCCGCCGAAGCGGAGGCCGTCGCCGTTGCCGCCGCCGCGTTGCAACGGAAGCCCGCGCGTCGCAAGATCTACAAGTGTCCGCACTGCGTGGCCATTTTCGAGAGGCTAAAGGAGCGCAATGCACACATGATTGGCGAGCACAACTATGTGCGCCAGAATCGGCGACTCATCTGTACACAGGCGGTGGTCAATGCCGCCTTGCTACAACAGCCGCaggctcaacaacaacaacaacagcagcagcagcaacagttgctgctgcaggcGGCAGGTGGGAGCATGACCGATGCCTTGCAGGAAGACTCCAAGGATGGCATTGTCAAGATCAAACAGGAGCACTGCCAGGACAAGCCCGATTCATCCGAACAGCTACTTGATCAGTTGGAGCTGCCGGATGTGAAAGACGCAGGCTTATTAGATGTGAACGGTGAGAGTGAACGGGATGCTGCAGACGTGAAACCCGCCACCAACGTGACTGATCTAAAGCCGCCGGCTATTACGCCTTTGGCCATGACAACTCCTGCTGCCAAATTGGCAGCGATTTATCGCATGCTCATTGCCTACAATGAGTCGAAGCTGGGACAGGATCATCACAACCTCAGCGAGCTGGAGCAAAAGGCCATGGAGAAATCCATATTTCTGTGCTACGTCTGTCGCACCGATTTCCCCTCTGTGAAACTGTACGATGCACATCTGACTGAACATCCCGCCGAGTGCTTCACCTGTGGCAAGAAATTCTATCGCTGGAAAAACTTTTCACTGCATCTGAAACGTCATCTTGGCTGGAAGGAATTCGGCTGCTATGTCTGCGATAAGAAGTTCGTTGTGCGCAGCGCTCTCGTCGAGCATATGCGGATGCACACTGGCCAAACTCCGTTGAAGTGCAAGATATGCGGCAAAAAGTTCAAGCGTTACTCGAACTTGACTCAGCATCGGAAGCGCCACACTAAAATGACGGTGCGGAAGAAGGAATACGTGTGTCACTGCGGCGAGGTGTTGCCCTCAAAGGCGCGGTTCCTTTGGCATAAGGAAACGCACGATTTGAAGCCCAAGTGCTGTCCATATTGCTGCGATCGTTTTGTCCACGCCAACTCACTGCGACGACACATCCGGCTGGCGCACTCGGACAAGTTTGACTATGCTGAGCCCATGGAATGTCCCATGTGCAAGCAGATCTTTGCCAAAACGTCCATCAAGGCGCACATGGCCACGCACTCGACGGATCCCCAATACGATTGCACCATCTGCAACAAGAGCTTCTCCACAAAATGGAATCTCAAGATACATTCGTGGGTGCATGCGAATCGCACAGCCAAACCGTTCAAGTGCGAGTATTGCCCCAAGGCCTTTGTTCGCGAGCTGGACTTCAAGAACCACAtgaacgcacacaagcagatTAAGCCGTATACCTGCGAGTATTGCGGTTGCAAGTTCATACGCAAGTACAACTACATGCGGCATCGGCGAGAGCATCATGGCAACAAGAAGTTCACCTGCGATCAGTGCGACAAATCGTTTCATCGACACTACTATCTGATTGAGCATCGGCGCATTCACACTGGGGAACGGCCATTCCACTGCACCATCTGCGGCAAGAGCTCGACCACGAAGACCAATCACAACAAGCATCTGAAGATCCATCATTCGCGTGATCCCTTCACCGTGGAGGTCTAA
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNNAMGSALAAAATSDGASSSSSPPDADVKPGVAATAPPAEAATAAAPPPPKTTTATAATTTTTLKSTAPKAATLLVNNTSGSNSSSCSNSNINTNSNSNSNNNNQLSNPPIKAVKSAPPSTEASATTSTTPTISSVAAAYPPSLTSDYRYDQQQQQQQQQQQQQQQQQATPTATLHGFPRGATTMLVIPHAPQQQQQHHFLATQPPAHFVHQQQQQQQQSAMKYTYATTLPPPPPPLQLFAPQPTTAQSHQKPPPAYGAAISQIRSQHNQNKQHPHQQQQQPQHHVTVQHNVNLAPPSGKHSKAHTEIFLNPPPPPPPQTTMPSSSTSSSAAAAAAAAALSRLQHPHPQQHQQSLAAGSSYAGANCSSSTSSLMAATSNGRGSSRQSTNSPFGVLLNAAAQAASSSSASSSASVLRFAESPVAHYLERDNGDFIVQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDEEEEEQSWENSDDEDHAKAHNHVEDGDDEREDSRSRVGLKTTAKKSRKFKSSGRVHKRASSKHRMATTEDEEEFMSVGSSDNEEQAEEQPQSSGGPSASVTSPSSPQLCTAPSTSSGAAAAVSGSVSSMTSGTLKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGAARPFAAVAPIPLVKVEKEEPLDEYDSVPIEIQSMEHKPSVENASGSSSSSSSNSSSNGHGTTSVIRMASTSSSTNVPPEDLTQPPAMKVEVEPTVLLPQRFSAPAQQRGPKKLVIKPKATATATPTTATTTTATTTTTTKKTDNNAASSRNSNCSESLSISKASADLVQIKSENVEPSTSSGSILEKHLTTSYTGQQARKHSTVNDDDARVLLEFANSKQLPLEGSSNPTTFVVNAASFASAGSVFANSIQSQPIRPGEEYILPDDNKVEMDEIVISSSSSFASATQQAQQQPHQHQHPQTTPPAVQATLQHVQPPTFNDFNFLYHQNTPTTTTTTASSFAPFGLQQQQHQQQHQQQQHHGSSEATNAATLASSSSNSSALDHESSMNATFRVAKTQSSPSAWYQPQQQQQQQSQSNNNQNVEQSSNFIAALAAVECCSVAMDSDASDAKYLDLDACKREQLSNSSSHLPSASASTSTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFKNQFPDGYHQQLPDWRQDYYPAQDLSGQPEHREHKRFDFNAVASDYAQPGELDASSSSARSNQLLDVHPTTSTSSLALLAGPPIASTSRAAAEAEAVAVAAAALQRKPARRKIYKCPHCVAIFERLKERNAHMIGEHNYVRQNRRLICTQAVVNAALLQQPQAQQQQQQQQQQQLLLQAAGGSMTDALQEDSKDGIVKIKQEHCQDKPDSSEQLLDQLELPDVKDAGLLDVNGESERDAADVKPATNVTDLKPPAITPLAMTTPAAKLAAIYRMLIAYNESKLGQDHHNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMTVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCTICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00537699;
- 90% Identity
- iTF_00602019;
- 80% Identity
- -