Dput015888.1
Basic Information
- Insect
- Drosophila putrida
- Gene Symbol
- lrrfip2
- Assembly
- GCA_037043535.1
- Location
- JBAMBI010001032.1:170041-172645[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1e-06 0.019 14.3 7.5 1 18 30 47 30 50 0.96 2 3 1.2e-94 2.1e-90 303.1 17.9 52 299 55 289 48 290 0.97 3 3 0.026 4.6e+02 -0.1 3.3 209 241 308 339 292 363 0.60
Sequence Information
- Coding Sequence
- ATGGATACCACAAGCACCACCGGAAGGCGGCGAAACAATTTGTGTGCCAATGCCGAGGATAATGCTCTCGACCAGATTACAAAGGAGGCCGAAGCGCGTTTAGCAGCTCGTCGACAAGCCAGAGTTGAAGCTCGTGAGATACTGGCAATGATAACATCAACACGTCTTGCCTACGGAGGTCTTATAAACTTGACGCGTGCAGCAGCTTCCCGCCGCAGTAGTGAGGATTCATTAGAGGAGGAGGGTCGCAGCTTTCGTGATGTCAAGCATGAGCTTAGGGATGTTGAGGAACGTTTCCGGAAGGCAATGATAACGAATGCACAGTTGGACAACGACCGGTCATCTCAAACTTATGAAGTCAAATTACTGAAGGATAAAAGTGAAACAATGCAAGAGGCTTTTGCCCAACTGCAGCGCGagcttaaaaacaaattgcgtGATTGCAATGCACTCAAACGCAATTTGGATCGCACAACACTTGAATTGAGCTTAGTCCAAGGCCAATTAAACGAACGCGATACGCTTATAGCGGAACACGgccttgttattgttgccattgaGAATACCGACGGTAGTGACGCCAAAAGGGCATTAGTTAGTGTTGAAAACGCCAATATCTTAGCGACCGTTCAGGGATCGCTTGATGTAAGACTTAAAAAGTTTACAGAAGAAAAACAGCGACTTTTAAAAGAAGTACAAGTGCTGCATGAACAGTTAGATGCTTATAAAACCGAAGGCAGAGCGGGTCGCAGTAGTTCGCTGAATGGATCCTTAGGATATGACGATGATTATGATGTTCAAAGGGAAGCAAACAAGATCGTAtcagattataaatataaactgcAAAAAGCCGAACAGGAAATCGCTAATCTACAAGCGAGTTTATCACGATCGGAATCGCAAGTTATTCGATATAAAAGCACGGCGGAAGCAGCGGAAAAAGTAGAGGCAGAGTTGAAAGTGGAACGGCGTAAACTGCAACGTGAGCATCGCGAAATACTGGAGCGCCTTGAAGAAGCAGAAACTGCAAATAATCATCTACTGAAACGTCTtgataaactaaaaaatgcaaaaagcacTATCTTGAAGGATTTATGA
- Protein Sequence
- MDTTSTTGRRRNNLCANAEDNALDQITKEAEARLAARRQARVEAREILAMITSTRLAYGGLINLTRAAASRRSSEDSLEEEGRSFRDVKHELRDVEERFRKAMITNAQLDNDRSSQTYEVKLLKDKSETMQEAFAQLQRELKNKLRDCNALKRNLDRTTLELSLVQGQLNERDTLIAEHGLVIVAIENTDGSDAKRALVSVENANILATVQGSLDVRLKKFTEEKQRLLKEVQVLHEQLDAYKTEGRAGRSSSLNGSLGYDDDYDVQREANKIVSDYKYKLQKAEQEIANLQASLSRSESQVIRYKSTAEAAEKVEAELKVERRKLQREHREILERLEEAETANNHLLKRLDKLKNAKSTILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336724;
- 90% Identity
- -
- 80% Identity
- -