Dpul000881.1
Basic Information
- Insect
- Drosophila pullipes
- Gene Symbol
- -
- Assembly
- GCA_035043795.1
- Location
- JAWNMT010000058.1:541404-543026[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.9e-16 5.7e-13 48.2 0.0 2 45 371 414 370 414 0.95 2 3 0.062 92 2.7 0.0 28 37 444 453 443 458 0.90 3 3 1.2e-18 1.8e-15 56.2 0.0 2 42 480 520 479 522 0.95
Sequence Information
- Coding Sequence
- ATGGGCCACTCGTCCACAATAATGGATATCCAGCGCGTTCTGCTCCATCAGCAAAGCAACAATCAAAGCTGCGAGGTCCTGCTGGTGGCCAAAGATGGCATCAGTGTGCGCGCCCATCTGTTCGTGCTGAGTACGTGCAGCGATCTGATGCGCAATCTTCTCGTCGATTTACCCACTGGCCAGGAGGCAACAGTCATCCTGCCCGACATACGCGGCGAGCTCCTGGAGAGCATGTTGTCTTTCATTTATATGGGTGAAACGAGTTTGCCCTCTGCCCTGCTCTCCGAATTCCTCGAAGCCATCAATCTGCTGGGCATCAAGTCTGCCATTAGTTTTGAAACGAATCCAATAGCCATGACCAGCACAGATGTGATCAGCGGCGCTATGGCCATCGAGGCAGCAAAGTCAATTAGTggattgcaaattgcaaatgcatcGCTtgtcgaggaggaggaggaagaggatgCTGGCGCGGTGGTTGGCAAACTTCAGATGGATAACACAGTGCTCGCTAAtccccagcagcaacagcatcacgATCAGCAGCAGGGACGAACGTTAGAGTTTCTTGATGTGTACAGTGATCAGCCGAAAATAACGTATTCCATTGAGCATATGGGCGGCACTAGCAATGGCAATCAGTATATATTAACGGAGAACACGGGCACCTTCACCATTACACAATCGGCATCTTCCGTAAATAAATTGGGCGATACAGTTAATCCCGTAATGGATACAGCGACGCACAGCGGTGAACTGGTTGACGATGAAGTCGATGCGGATGTCACCGATGATCACGACGAATCCGAATCCCAGTTAATCGAGGAAGAGTACGGGGCATCCGCGGATCCTTTGATAGAGATCagtgcagatgcagatgccgATGCTGATATGACCGAGGATGTAATGCATGAAGTGGGTGCCGGCGACGAGGAGGAAGACGATGAAGAACTGCTGGATGTGAAGCCACGCAAATCCCACCTAgacataaaattgttaaaaacaaaGATACGCCAGCGCGCCATGCCCACAAAAGCTGCGTCCAAAAAAGCGATAACGAAACAGCATCAAGAGCATGTGGCACTGAAAAAGGAGCTCAAGGAAGATATCAATGATGCCCTTGATCTGGCCGCAGACGCTGTCCTCCACGAGGGACTGAGTCTGCAGAAGGCTGCCGATCGTTTTGACATATCGAAAACCGTATTATGGCGACGGGTGCGCTCCAATCCGGCGTACATGCGAATCAAGCGAGAGAAGCCATCGCTATCGGAAGCCTACGAACGTCTGAAGAAAGGCGACTCTCTGAAGAGCATCAGCCAGGATCTGCACATACCGATGTCAACGCTGCACAGGCACAAGGTACGCCTGGCGGCCCAAGGACGACTGCCCGACTTCGTCGCCTGTCGGCGGCGAGACAGCACGCCCAAGGATGAGCTGCGCGACAAGCTGGCGAAGGCATTACATGCCTGCATCACCGATGGCATGTCACAGAACCATGCCGCGAATCTCTTCGAAATACCCAAGAGCACACTTTGGCGACATTTACAGCGACGCGTCACCGAAGCTGAGCGAAAAGTcaaggaggagcaggaggaggacgaCGAGGAGGATGGGCTTAactaa
- Protein Sequence
- MGHSSTIMDIQRVLLHQQSNNQSCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLVDLPTGQEATVILPDIRGELLESMLSFIYMGETSLPSALLSEFLEAINLLGIKSAISFETNPIAMTSTDVISGAMAIEAAKSISGLQIANASLVEEEEEEDAGAVVGKLQMDNTVLANPQQQQHHDQQQGRTLEFLDVYSDQPKITYSIEHMGGTSNGNQYILTENTGTFTITQSASSVNKLGDTVNPVMDTATHSGELVDDEVDADVTDDHDESESQLIEEEYGASADPLIEISADADADADMTEDVMHEVGAGDEEEDDEELLDVKPRKSHLDIKLLKTKIRQRAMPTKAASKKAITKQHQEHVALKKELKEDINDALDLAADAVLHEGLSLQKAADRFDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKKGDSLKSISQDLHIPMSTLHRHKVRLAAQGRLPDFVACRRRDSTPKDELRDKLAKALHACITDGMSQNHAANLFEIPKSTLWRHLQRRVTEAERKVKEEQEEDDEEDGLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00549654;
- 90% Identity
- iTF_00516912;
- 80% Identity
- iTF_00583065;