Basic Information

Insect: Drosophila pseudotalamancana
Gene Symbol: -
Assembly: GCA_037075185.1
Location: JBAMCK010000969.1:3059-9847[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.3e-05 0.0016 18.8 2.1 1 23 228 250 228 250 0.97

2 18 7.4e-06 0.00052 20.3 0.4 1 23 256 278 256 278 0.97

3 18 0.0011 0.077 13.5 0.9 1 23 284 306 284 306 0.95

4 18 1.6e-05 0.0011 19.3 3.1 1 23 312 334 312 334 0.97

5 18 3.6e-05 0.0025 18.2 4.7 1 23 340 362 340 362 0.99

6 18 6.5e-05 0.0046 17.3 5.7 1 23 368 390 368 390 0.97

7 18 3.2e-07 2.2e-05 24.6 4.3 1 23 396 418 396 418 0.98

8 18 1.1e-07 8e-06 26.0 2.4 1 23 424 446 424 446 0.97

9 18 6.7e-05 0.0047 17.3 6.7 1 23 453 475 453 475 0.97

10 18 0.00012 0.0081 16.6 6.5 1 23 481 503 481 503 0.98

11 18 1e-05 0.00073 19.9 4.5 1 23 509 531 509 531 0.98

12 18 7.6e-06 0.00053 20.3 8.1 1 23 537 559 537 559 0.98

13 18 6.1e-06 0.00043 20.6 7.6 1 23 565 587 565 587 0.97

14 18 6.9e-07 4.8e-05 23.6 7.7 1 23 593 615 593 615 0.98

15 18 0.00021 0.015 15.7 9.5 1 23 621 644 621 644 0.95

16 18 7.6e-05 0.0053 17.1 0.9 1 23 650 672 650 672 0.98

17 18 0.00083 0.058 13.9 3.4 1 23 682 704 682 704 0.97

18 18 9.5e-06 0.00066 20.0 1.6 1 23 710 733 710 733 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.3e-05	0.0016	18.8	2.1	1	23	228	250	228	250	0.97
2	18	7.4e-06	0.00052	20.3	0.4	1	23	256	278	256	278	0.97
3	18	0.0011	0.077	13.5	0.9	1	23	284	306	284	306	0.95
4	18	1.6e-05	0.0011	19.3	3.1	1	23	312	334	312	334	0.97
5	18	3.6e-05	0.0025	18.2	4.7	1	23	340	362	340	362	0.99
6	18	6.5e-05	0.0046	17.3	5.7	1	23	368	390	368	390	0.97
7	18	3.2e-07	2.2e-05	24.6	4.3	1	23	396	418	396	418	0.98
8	18	1.1e-07	8e-06	26.0	2.4	1	23	424	446	424	446	0.97
9	18	6.7e-05	0.0047	17.3	6.7	1	23	453	475	453	475	0.97
10	18	0.00012	0.0081	16.6	6.5	1	23	481	503	481	503	0.98
11	18	1e-05	0.00073	19.9	4.5	1	23	509	531	509	531	0.98
12	18	7.6e-06	0.00053	20.3	8.1	1	23	537	559	537	559	0.98
13	18	6.1e-06	0.00043	20.6	7.6	1	23	565	587	565	587	0.97
14	18	6.9e-07	4.8e-05	23.6	7.7	1	23	593	615	593	615	0.98
15	18	0.00021	0.015	15.7	9.5	1	23	621	644	621	644	0.95
16	18	7.6e-05	0.0053	17.1	0.9	1	23	650	672	650	672	0.98
17	18	0.00083	0.058	13.9	3.4	1	23	682	704	682	704	0.97
18	18	9.5e-06	0.00066	20.0	1.6	1	23	710	733	710	733	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTTTCAGCACCGGTGGTGACCACTGGCGGTGGCACCACCATCACTTTGGGCGGACCGCCGCCATTGCCTGGAAACAAAACAGATCATAAAGAGGACGGCAGCAAGCCACCGCACGGCATTGAAATGTATAAAGTGAACATTGAGGATATATCACAGTTATTTACGTATCACGAGGTATTTGGCAAAATCCATGGCGATGTGGTGAATCATGTGGCGGCGGTGCATGGCAGCCAGCTGCCACCGCCGCAgttgccaccgccaccgccattACCACCGCAGACGACGCATTCGGCtagcgcagctgcagctgcagcggcggtGTCCACAAATAACGCAGCCGTCGCTGCTGTAATGGCCTCAGCCAATGCAGCAGCCGCGGCTGCAGCGGCCGCATCAGCAGCGGCCACctcccaacagcagcaacagcaagcgaCAGCGACAAGCACAAATGCTGGCACACAACAGGGCAGCGCCACGGTGACCACGACTAACTCCGGCAGCAACGGGGGGAATGGGGGCAATAACTCGACAACGACGACGGGTGAGTTGCTAATGCCTAAAATGGAGGGCGGCATTCATAGCGTCGATGGGCAATCGAGCGTTGCGTTGGCGCCGGATGGCACGCCCATTGCGACTGGTACGCATGTGTGCGACATTTGTGGCAAGATGTTCCAATTTCGCTATCAGCTGATTGTGCACCGTCGCTACCACAGCGAGCGCAAGCCGTTCATGTGTCAGGTATGCGGTCAGGGTTTTACCACATCGCAGGATTTGACCAGGCATGGCAAGATCCACATTGGGGGTCCCATGTTCACCTGCATTGTCTGCTTCAATGTATTTGCCAATAATACGAGTCTGGAGCGCCATATGAAACGGCATTCAACGGACAAGCCATTCGCCTGCACCATTTGCCAAAAGACTTTCGCACGCAAAGAGCATCTGGACAATCATTTTCGTTCCCATACGGGCGAAACACCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCACCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAAATCTGCGGCAAGAGCTTTAGTCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGTGAGACGCCACATCGGTGCGACTTCTGCTCCAAGACGTTTACGCGCAAGGAGCATTTGTTAAATCACGTGCGCCAGCACACGGGAGAGTCGCCGCATCGCTGCTCCTACTGCATGAAGACGTTTACGCGCAAGGAGCATCTGGTGAATCATATTCGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACACGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACGTACTGCACCAAGACGTTTACGCGCAAGGAGCACCTCACGAATCATGTGCGACAGCACACGGGCGATTCGCCGCACCGTTGCAGCTACTGCAAGAAGACCTTCACCCGCAAGGAGCATTTGACGAATCATGTGCGCCTGCACACTGGAGATTCGCCGCACAAATGCGAATACTGCCAGAAGACGTTCACGCGCAAGGAGCATCTGAATAATCACATGCGCCAGCACTCGAGCGACAATCCTCATTGTTGCAACGTGTGCAACAAGCCCTTCACACGCAAGGAGCATCTGATTAATCATATGTCCCGCTGCCACACCGGCGATCGTCCCTTCACCTGCGAGACGTGCGGCAAGTCGTTCCCCCTCAAGGGCAATCTTCTTTTCCATCAGCGTAGCCACACCAAGGGCCAGGAATGCGAGCGTCCCTTCGCCTGCGAAAAGTGCCCCAAGAATTTCATATGTAAAGGTCACTTGGTCTCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCTTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCgtgcatccgcatccgcaaaTACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCCCATCACTCGACGACCACGATGCACACCATACAGCAAATAACAGCGGGCGCAGCAGCGGCTGGCGCCGGAGCCGTCCAGCTAACGCCCGGCCTGGTGCCGCTCGTAACGAGCACGCTCATCTCGCACAATGCCCAGCAGtcgcagaagcagcagcagcaagtggcCGCAGCAGTGGCTGCCCAACAgcaggcggcagcagcagccgctgcccaGCAACAGGCAgccgctgcggcggcggcCCAGCAGCAagcggcggctgcagcagcgcaccaacagcatcagcaacaggtGGCcgctcagcagcaacaacaacagcagcaacaggcagcagttgctgctcatcagcagcagcaacagcaactgcagcagcaacagttgctgcagttgtccATACAGCAGGCGgcgcatcatcatcagcaccagcagcagcaacagcaacaacatcatcaacagcagcaacagcaacagtcgcacCCACAGGCAccgccacagcagcagcagcaacaacaacaaccgccaCCACAGGTGCCGATTGCATTGATTAGTGATCCAAGCGCACTGGCGCGTGCCGccatgcagctgcaacatctgCCCACAAATGTGGAGCAGCACCCGGTGGTTTACTAA
Protein Sequence: MQHVSAASSAPSVVSAPVVTTGGGTTITLGGPPPLPGNKTDHKEDGSKPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHVAAVHGSQLPPPQLPPPPPLPPQTTHSASAAAAAAAVSTNNAAVAAVMASANAAAAAAAAASAAATSQQQQQQATATSTNAGTQQGSATVTTTNSGSNGGNGGNNSTTTTGELLMPKMEGGIHSVDGQSSVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSTTTMHTIQQITAGAAAAGAGAVQLTPGLVPLVTSTLISHNAQQSQKQQQQVAAAVAAQQQAAAAAAAQQQAAAAAAAQQQAAAAAAHQQHQQQVAAQQQQQQQQQAAVAAHQQQQQQLQQQQLLQLSIQQAAHHHQHQQQQQQQHHQQQQQQQSHPQAPPQQQQQQQQPPPQVPIALISDPSALARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: iTF_00479608;
80% Identity: -