Dpse015730.1
Basic Information
- Insect
- Drosophila pseudotalamancana
- Gene Symbol
- bab2_1
- Assembly
- GCA_037075185.1
- Location
- JBAMCK010001113.1:634789-637052[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-18 1e-14 53.9 0.0 1 43 59 102 59 104 0.95
Sequence Information
- Coding Sequence
- ATGATTGAGACGAGCGGACACGGCTGGATGGGTGCACCGGCAACAGGCGCATCTGTGGCGGCAGACAGCTATCAATACCAGCTGCAGTCCATGTGGCAGAAGTGCTGGAACACTAACCAACAGAATCTGGTGCAACAGCTGCGCTTTCGTGAGCGCGGACCACTGAAGTCCTGGCGCCCGGAAGCCATGGCGGAGGCCATATTCAGCGTCCTCAAGGAGGGATTGTCGCTGTCACAAGCTGCCCGCAAGTACGACATACCCTATCCCACATTCGTGCTGTACGCCAATCGGGTGCACAACATGCTGGGCCCCTCCCTGGACGGGGGCACCGATCCACGGCCGAAGGCGCGCGGCCGACCGCAAAGGATACTCCTGGGCATGTGGCCCGAGGAGCTTATCCGCAGCGTCATCAAGGCCGTCGTCTTCCGGGACTATCGCGAGATCAAGGAGGACATCGGCGCTCATCAGTATGCCAATGGACAGGCTCACGGTTCGCATTACGGATCAGGCGGCTCCTCAGCGGCAGCCAACGGCTACCACGGCGCATCCATGAAGATGGCTCCGCCGGACGGGGGCAATCCGCTGAGCACCATGACGGAGACGCTGCGCAGGCAGATCCtctcccagcagcagcagcaacagcagcagcaacaccagcagcagcagcaggcgccgcACGTGCAGTCGATGAACATGTACAAGAGTCCGGCGTACTTGCAGCGGTCCGAGATCGAGGATCAGGtgtcggcggcggcggccaagCACCAGCAGAGCGAGCGACGCGGCGCCGAGAATCTGCCCGATCTGAGCGCGTTGGGTCTGATGGGCCTGCCCGGGCTAAACGTGATgccgacgcagcagcagccgggcGGACATCAGCGCAGCGGCGCCGGCAGCGGAGGCAGCGCAGGCGCCGCGATGCATCCGAGCGCCGCGAGCTACGCCCGCGAGCTGTCCCGCGAGcgggagcgagagcgagagatgtCCCGGGATCGGGAGCTGAAGGAGGCGATGCATGCGCGCCAGTATGGCAACCATTCACGTGGCTCCAACTCCTCGGCGGGCAGCAAGTCGGCCGCCTCGAGTCGTCCGGGCGCCGCCGCCTCGCCCTACTCCGCGCACTACGCCAAGCACGCCAAGGAGCATCCCAGCTATGCGTACAACAAGCGCTTCCTCGAGAGCCTGCCCGCGGGCATCGACTTCGAGGCGATTGCGAACGGGCTGCTGCAGAAGTCGGTGAACAAGAGTCCGCGCTTCGAGGACTTCTTCCCCGGCCAGGACATGAGCGAACTCTTTGCCAGCGCCGACGGCAGCGCCGGCGCCAACGCCGGCTccgcggcagcggcagcagcggcggcagcagcagcggccgccTACGCCCCGCCCGGCATCCGCGAGTCGCCGCTGATGAAGATcaagctggagcagcagcaggcggcggaGCTGCCGCACGAGGATTGA
- Protein Sequence
- MIETSGHGWMGAPATGASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDIGAHQYANGQAHGSHYGSGGSSAAANGYHGASMKMAPPDGGNPLSTMTETLRRQILSQQQQQQQQQHQQQQQAPHVQSMNMYKSPAYLQRSEIEDQVSAAAAKHQQSERRGAENLPDLSALGLMGLPGLNVMPTQQQPGGHQRSGAGSGGSAGAAMHPSAASYARELSREREREREMSRDRELKEAMHARQYGNHSRGSNSSAGSKSAASSRPGAAASPYSAHYAKHAKEHPSYAYNKRFLESLPAGIDFEAIANGLLQKSVNKSPRFEDFFPGQDMSELFASADGSAGANAGSAAAAAAAAAAAAAYAPPGIRESPLMKIKLEQQQAAELPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01327085;
- 90% Identity
- iTF_00493569; iTF_00476547; iTF_00540292; iTF_00546574; iTF_00559414; iTF_00512646; iTF_00532297; iTF_00545161; iTF_00573242; iTF_00544416; iTF_00572521; iTF_00509740; iTF_00502447; iTF_00568176; iTF_00599505; iTF_00516180; iTF_00551509; iTF_00472988;
- 80% Identity
- -