Dpen014414.2
Basic Information
- Insect
- Drosophila peninsularis
- Gene Symbol
- bab2
- Assembly
- GCA_035047485.1
- Location
- JAWNPN010000090.1:80741-83043[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-18 1e-14 53.9 0.0 1 43 59 102 59 104 0.95
Sequence Information
- Coding Sequence
- ATGATTGAGACGAGTGGACATGCCTGGATGGGCGCACCGGCAACAGGCGCATCTGTGGCGGCAGACAGCTATCAATATCAGCTGCAGTCCATGTGGCAGAAGTGCTGGAACACCAACCAACAGAATCTGGTGCAACAGCTGCGCTTTCGTGAGCGCGGCCCACTCAAGTCCTGGCGCCCGGAAGCCATGGCCGAGGCCATATTTAGCGTCCTAAAGGAGGGCCTGTCACTGTCGCAAGCCGCTCGCAAATACGATATACCCTATCCGACATTCGTCCTCTATGCGAATCGTGTCCACAATATGCTGGGACCCTCGCTCGACGGCGGCAGCGATCCGCGGCCCAAGGCACGCGGTCGACCGCAACGCATTCTGCTGGGCATGTGGCCGGACGAGCTCATACGCAGCGTCATCAAGGCCGTCGTCTTTCGCGACTATCGCGAAATCAAGGAGGACATTAACGCACATCCCTATGCCAATGGACAGTCGCACGGTGCCCACTATGGCAGCAACTCGTCTGCAGCGGCCAATGGCTATCATAGCGCGGCCGTCAAGATGGCTCCGCCCGACGGCAGCAATCCGCTGAGCACCATGACAGAGACGCTACGCCGCCAGATACTctcgcaacaacagcagcaacaacaacaacaacaacatcagcaacaatcGCCGCATATGCAGTCGATGAACATGTACAAGTCGCCGGCCTATTTGCAGCGCTCGGAGATCGAGGATCAGGtgtcggcggcagcagctgtggccGCAGCCAAGCATCAGCAGAACGATCGACGCGGCTCGGAAAATCTGCCTGATCTGAGCGCTTTGGGTCTGATGGGTTTGCCCGGCTTGAACGTGATGCCCACGCAACAGCAGTCGGGCGGGCATCAGCGCAGCGGCCCGGGCAATGGAGGCAGCGCCGGTTCCGGCATGCATCCCAATGCGGCCAGCTATGCGCGTGAACTGTCgcgggagcgagagagggagcgcgAGATGTCGCGCGATCGCGAGCTGAAGGAGGCAATGCACGCCCGACAGTATGGCAATCAGTCGCGCGGCTCGAACTCGTCGGCGGGCAGCAAGTCGGCGTCATCAAGTCGTCCCGGTGCCGCCGCCTCCCCCTACTCTGCCCACTATGCCAAGCACGCCAAGGAGCATCCCAGCTATGCGTACAACAAGCGCTTTCTCGAAAGCCTGCCGGCGGGCATAGACTTCGAGGCGATTGCGAACGGGCTGCTCCAGAAGTCGGTGAACAAGAGTCCGCGCTTCGAGGACTTCTTTCCCGGCCAGGACATGAGCGAGCTGTTTGCCAGTGCCGATGGCAGCGGCAACTCTGGCGCTGgctcagcggcagcagcagccgccgccgccgcagcagcggctgcctaTGCGCCGGCGGGCATGCGTGAGTCGCCGCTGATGAAAATCAaattggagcagcagcaggccgcCGAGCTGCCGCACGAGGATTGA
- Protein Sequence
- MIETSGHAWMGAPATGASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGSDPRPKARGRPQRILLGMWPDELIRSVIKAVVFRDYREIKEDINAHPYANGQSHGAHYGSNSSAAANGYHSAAVKMAPPDGSNPLSTMTETLRRQILSQQQQQQQQQQHQQQSPHMQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAKHQQNDRRGSENLPDLSALGLMGLPGLNVMPTQQQSGGHQRSGPGNGGSAGSGMHPNAASYARELSREREREREMSRDRELKEAMHARQYGNQSRGSNSSAGSKSASSSRPGAAASPYSAHYAKHAKEHPSYAYNKRFLESLPAGIDFEAIANGLLQKSVNKSPRFEDFFPGQDMSELFASADGSGNSGAGSAAAAAAAAAAAAAYAPAGMRESPLMKIKLEQQQAAELPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00493569; iTF_00540292; iTF_00512646; iTF_00572521; iTF_00546574; iTF_00502447; iTF_00476547; iTF_00568176; iTF_00599505; iTF_01570166; iTF_00551509; iTF_00559414; iTF_00472988; iTF_00544416; iTF_00545161;
- 90% Identity
- iTF_00582185;
- 80% Identity
- -