Dpse006385.1
Basic Information
- Insect
- Drosophila pseudotakahashii
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035046095.1
- Location
- JAWNOE010000105.1:21029846-21031849[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-121 1.4e-116 389.3 27.7 1 299 30 320 30 321 0.98 2 2 0.022 4.8e+02 0.1 3.4 209 242 339 371 323 394 0.57
Sequence Information
- Coding Sequence
- ATGGAAAGTATCAGCACCACAGGTCGGCGACGGAACAACATGCGAATCAATGCCGAGGATAATGCCCTGGATCAAATTACAAAAGAGGCGGAAGCGCGACTGGCCGCGCGTCGACAGGCGCGTGCCGAAGCCCGCGAGATTCGCATGAAGGAGCTGGAGCGCCAGCAGAAGGAGCAGGAGATAACCGCGGACCGGGTGTTCGACATGCAGAACTCCACTGCAGTGGGCAGCGAGCCCCTCTCGGTGCATCCCGTTCGCCTCGTCTACGGCGGCCTGTTAAACGTAACCCGTGCCTCAGCCTCCCGCCGAAGTAGCGAGGACTCCGTGGAAGAGGAGGGCAGAAGTTTTCGCGACTTCAAGCACGAGCTTAAGGATGTTGAGGAACGGTTTCGGAAGGCCATGATAACGAACGCCCAGTTGGACAACGATCGCGCCTCGCAGGCCTACGAAGTTAAACTGCTAAAGGACAAGTGCGAAATCATGGAGGAGTCGTTTGCACAGCTGCAGCGCGAGTTCAAGGAGAAGATGCGCGACTGCAATGCCCTCAAGCGGAACCTGGACCGCGCCAATCTGGAGCTTAAACTAGTACAAGGACAGCTGAACGAGCGCGACTCGTTGATAGCCGAGCAGGGCCTTCTGATTGTGGCAGTTGAGAATGCCGATGGCAGCGATGCCAAGAGGGCTCTAGTGAGTGTGGAGAATGCGAAAGTTCTGGCGTCCGTTCAGGGTTCTTTAGACGTAAGACTTAAGAAGTTCAGTGACGAGAAACAGCGACTGCTGTCCGAGGTGCAAAAGCTTCACGAACAGCTGGATGAGTATAAAAGTGATGGAATGACTGGACGTCGCAGTCTTTCGCAAGGTTCCTTTGGTGATGAGAATGACTACGAGGCCCAACGGGAATCAAACAAAATCATTTCAGACCATAAATATAAGCTGCAAAAGGCGGAACAGGAGATCGCCAACTTGCAATCGAGCTTAGCCCGTTCAGAGACTCAAGTAATTCGATACAAAAGCACTGCGGAAGCCGCCGAAAAGGCAGAGGCAGAGTTGAAGGTCGAGCGCCGCAAGCTTCAGCGCGAGCACCGggaaattttggaaaaattggagGAAGCTGAAACGTCAAACAACCATTTGCTGAAGCGTCTCGATAAGTTGAAAAACGCTAAGAGTGCCATTCTAAAGGACTTATGA
- Protein Sequence
- MESISTTGRRRNNMRINAEDNALDQITKEAEARLAARRQARAEAREIRMKELERQQKEQEITADRVFDMQNSTAVGSEPLSVHPVRLVYGGLLNVTRASASRRSSEDSVEEEGRSFRDFKHELKDVEERFRKAMITNAQLDNDRASQAYEVKLLKDKCEIMEESFAQLQREFKEKMRDCNALKRNLDRANLELKLVQGQLNERDSLIAEQGLLIVAVENADGSDAKRALVSVENAKVLASVQGSLDVRLKKFSDEKQRLLSEVQKLHEQLDEYKSDGMTGRRSLSQGSFGDENDYEAQRESNKIISDHKYKLQKAEQEIANLQSSLARSETQVIRYKSTAEAAEKAEAELKVERRKLQREHREILEKLEEAETSNNHLLKRLDKLKNAKSAILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336724;
- 90% Identity
- iTF_00602585;
- 80% Identity
- -