Basic Information

Insect: Drosophila pruinosa
Gene Symbol: -
Assembly: GCA_018150935.1
Location: JAECWR010000034.1:9669832-9679201[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.4e-05 0.0011 19.3 2.1 1 23 119 141 119 141 0.97

2 18 4.5e-06 0.00037 20.8 0.4 1 23 147 169 147 169 0.97

3 18 0.00067 0.055 14.0 0.9 1 23 175 197 175 197 0.95

4 18 9.6e-06 0.00078 19.8 3.1 1 23 203 225 203 225 0.97

5 18 2.2e-05 0.0018 18.7 4.7 1 23 231 253 231 253 0.99

6 18 4e-05 0.0033 17.9 5.7 1 23 259 281 259 281 0.97

7 18 2e-07 1.6e-05 25.1 4.3 1 23 287 309 287 309 0.98

8 18 7e-08 5.7e-06 26.5 2.4 1 23 315 337 315 337 0.97

9 18 4.1e-05 0.0033 17.8 6.7 1 23 344 366 344 366 0.97

10 18 7.1e-05 0.0058 17.1 6.5 1 23 372 394 372 394 0.98

11 18 6.3e-06 0.00052 20.4 4.5 1 23 400 422 400 422 0.98

12 18 4.6e-06 0.00038 20.8 8.1 1 23 428 450 428 450 0.98

13 18 3.7e-06 0.00031 21.1 7.6 1 23 456 478 456 478 0.97

14 18 4.2e-07 3.4e-05 24.1 7.7 1 23 484 506 484 506 0.98

15 18 0.00013 0.011 16.2 9.5 1 23 512 535 512 535 0.95

16 18 4.6e-05 0.0038 17.7 0.9 1 23 541 563 541 563 0.98

17 18 0.00051 0.041 14.4 3.4 1 23 573 595 573 595 0.97

18 18 5.8e-06 0.00047 20.5 1.6 1 23 601 624 601 624 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.4e-05	0.0011	19.3	2.1	1	23	119	141	119	141	0.97
2	18	4.5e-06	0.00037	20.8	0.4	1	23	147	169	147	169	0.97
3	18	0.00067	0.055	14.0	0.9	1	23	175	197	175	197	0.95
4	18	9.6e-06	0.00078	19.8	3.1	1	23	203	225	203	225	0.97
5	18	2.2e-05	0.0018	18.7	4.7	1	23	231	253	231	253	0.99
6	18	4e-05	0.0033	17.9	5.7	1	23	259	281	259	281	0.97
7	18	2e-07	1.6e-05	25.1	4.3	1	23	287	309	287	309	0.98
8	18	7e-08	5.7e-06	26.5	2.4	1	23	315	337	315	337	0.97
9	18	4.1e-05	0.0033	17.8	6.7	1	23	344	366	344	366	0.97
10	18	7.1e-05	0.0058	17.1	6.5	1	23	372	394	372	394	0.98
11	18	6.3e-06	0.00052	20.4	4.5	1	23	400	422	400	422	0.98
12	18	4.6e-06	0.00038	20.8	8.1	1	23	428	450	428	450	0.98
13	18	3.7e-06	0.00031	21.1	7.6	1	23	456	478	456	478	0.97
14	18	4.2e-07	3.4e-05	24.1	7.7	1	23	484	506	484	506	0.98
15	18	0.00013	0.011	16.2	9.5	1	23	512	535	512	535	0.95
16	18	4.6e-05	0.0038	17.7	0.9	1	23	541	563	541	563	0.98
17	18	0.00051	0.041	14.4	3.4	1	23	573	595	573	595	0.97
18	18	5.8e-06	0.00047	20.5	1.6	1	23	601	624	601	624	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTTTCAGCACCGGTGGTGACCACTGGCGGTGGCACCACCATCACGTTAGGCGGACCGCCGCCATTGCCAAGTCATAAACTAGATCATAAAGAAGACGGCGGCAAGCCGCCACACGGCATTGAAATGTATAAAGTGAACATTGAGGATATATCGCAACTATTTACGTATCACGAGGTCTTTGGCAAAATCCATGGCGATGTGGTGAATCATGTCGCGGCGTTGCTGATGCCCAAAATGGAGGGCGGCATTCATGGCGTCGATGGGCAGTCGAGCGTTTCGTTGGCGCCGGATGGCACGCCCATTGCGACTGGTTCGCATGTGTGCGATATTTGTGGCAAGATGTTCCAGTTTCGCTATCAGCTGATTGTGCACCGTCGCTACCACAGCGAGCGCAAGCCATTTATGTGTCAGGTGTGCGGTCAGGGCTTTACCACATCGCAGGATTTGACCCGTCATGGCAAAATCCACATTGGCGGTCCCATGTTCACCTGCATTGTTTGCTTCAATGTGTTTGCCAACAATACCAGTTTGGAGCGCCATATGAAACGGCATTCAACGGACAAACCATTCGCCTGCACCATTTGCCAAAAGACTTTCGCACGCAAAGAGCATCTGGACAATCATTTTCGTTCGCATACGGGCGAAACGCCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCACCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGTGAAATCTGCGGCAAGAGCTTTAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGTGAGACGCCGCATCGGTGCGACTTCTGCTCCAAGACGTTCACACGCAAGGAGCATTTGTTAAATCACGTGCGCCAGCACACGGGAGAGTCGCCGCATCGCTGCTCCTACTGCATGAAGACGTTCACGCGCAAGGAGCACCTGGTGAACCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACACGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACCTATTGCACGAAGACGTTTACGCGCAAGGAGCACCTCACGAATCATGTGCGACAGCACACGGGCGATTCGCCGCATCGTTGCAGCTACTGCAAGAAGACCTTCACCCGGAAGGAGCATCTGACGAATCATGTGCGCCTCCACACTGGTGATTCGCCTCACAAATGCGAGTACTGTCAGAAGACGTTTACGCGCAAGGAGCATCTCAATAACCATATGCGCCAGCACTCGAGCGACAATCCCCATTGCTGCAATGTGTGCAACAAGCCCTTCACTCGCAAGGAGCATCTGATCAATCATATGTCACGCTGTCACACCGGCGATCGCCCCTTCACCTGCGAGACGTGCGGCAAGTCCTTTCCGCTCAAGGGCAATCTGCTATTCCATCAGCGCAGCCACACCAAGGGTCAGGAGTGCGAGCGTCCGTTTGCCTGTGAAAAGTGCCCCAAGAATTTCATTTGCAAAGGTCACTTGGTCTCGCACATGCGTTCCCATTCGGGCGAGAAACCGCACGCGTGCACTCTGTGCAGCAAGGCTTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCGTGCATCCGCATCCTCAAATACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCGCATCATTCGGCGACGACCACCATGCATACCATACAGCAGATAACAGCAGGCGCTGCTGCGGCTGGCGCCGGTGCCGTCCAGCTAACACCGGTGGAGCTGGAGAGTGATGAAGGCGGCGCAGGCCTAGGCTAA
Protein Sequence: MQHVSAASSAPSVVSAPVVTTGGGTTITLGGPPPLPSHKLDHKEDGGKPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHVAALLMPKMEGGIHGVDGQSSVSLAPDGTPIATGSHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAAAGAGAVQLTPVELESDEGGAGLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00599004;
90% Identity: iTF_00541885;
80% Identity: -