Dpru018108.1
Basic Information
- Insect
- Drosophila pruinosa
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_018150935.1
- Location
- JAECWR010000154.1:522577-523437[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-78 9.3e-74 248.4 13.8 92 299 10 207 7 208 0.99
Sequence Information
- Coding Sequence
- ATGTCTAAATTGTTGATGGTTTTTATATTGCAGGAAGTTGAAGAACGATTTAAGAAGGCAATGATAACAAATGCTCTATTGGACAATGACCGCTCATCTCAAACATATGAAGTCAAATTATTGAAGGATCAAAGAGAAACGATGCAGGAGTCTATTGCCCAACTCCAGCGTGAGCTTAAAAACAAATTACGTGATTTTAACGCTCTTAAACGGAATTTGGAACGCACGACACTTGAATTAAGTTTGATTCAAGGTCAATTAAGCGAACGCGATGCGTTGATAGCAGAGCATGGTCTTGTTATTGTAGCTATTGAGAATACTGATGGCAGTGATGCCAAACGGGCATTAGTTAGTATGGAAAACGCCAATATTTTAGCCACTGTTCAGGGATCCATTGATGTCAGACTTAAAAAGTTTACAGAAGAAAAAGAGATACTTTTAATGCAAATTCAAGTACTACACGAACAGTTAAATGCTTATAAAAGTGAAGGTCAATCCGGTCGCTGTGGTTCGTTTAATAGCTCTTTAGGTTATGATGATGATTATGATATTCAAAGAGAAGCAAATAAGGTCATATCAGATTATAAATACAAACTACAAAAGGCTGAACAGGAAATTGCTAATCTTCAAGCTAGTTTGTCACGCTCGGAATCGCAAGTTATCCGCTATAAAAGTACGGCTGAAGCAGCGGAAAAAGTAGAGGCGGAACTGAAAGTGGAAAGACGCAAACTGCAACGAGAGGTGTGTTACCATTAA
- Protein Sequence
- MSKLLMVFILQEVEERFKKAMITNALLDNDRSSQTYEVKLLKDQRETMQESIAQLQRELKNKLRDFNALKRNLERTTLELSLIQGQLSERDALIAEHGLVIVAIENTDGSDAKRALVSMENANILATVQGSIDVRLKKFTEEKEILLMQIQVLHEQLNAYKSEGQSGRCGSFNSSLGYDDDYDIQREANKVISDYKYKLQKAEQEIANLQASLSRSESQVIRYKSTAEAAEKVEAELKVERRKLQREVCYH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802834;
- 90% Identity
- -
- 80% Identity
- -