Dpru002978.1
Basic Information
- Insect
- Drosophila pruinosa
- Gene Symbol
- bab1
- Assembly
- GCA_018150935.1
- Location
- JAECWR010000199.1:2202212-2204469[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-18 1.4e-14 53.6 0.0 1 43 55 98 55 100 0.95
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCACGCTTGGATGGGTGCCACTGGTTCGACGTTAGCAGCAGACAGCTATCAGTATCAACTGCAGTCGATGTGGCAAAAATGCTGGAATACCAATCAGAATCTCATGCATCATATGCGGTTTCGGGAACGCGGTCCGTTAAAATCGTGGCGCCCCGAGACGATGGCCGAGGCAATTTTTAGCGTGCTCAAAGAGGGACTCTCGCTGTCGCAGGCGGCCCGCAAATATGACATACCCTATCCGACGTTCGTGCTCTATGCGAATCGAGTGCACAACATGCTGGGGCCATCCATCGATGGCGGCCCGGATTTGCGGCCCAAGGGACGCGGTCGGCCGCAACGCATACTATTGGGTATCTGGCCGGATGAGCACATTAAGGGCGTCATCAAAACGGTGGTCTTTCGCGATAACAAGGATTTGAAAGACGACGGCTTGAGCTCGCACATGCCGCCATATGGCCGGCATTCGCCCGTGTTTCCTTTGCAGGACATGACCCTAAGCTATCCAGGCGCTAGTGGCAGCATGCCGGGCAGCGGCGCAGCTGGCCTAAGCGCTTTAGCCTGTCCTAATGGCATGGGCAGTGGAGGCAGCGCTGCCGGCAGTGGCGGCGGTGGTGGCGCTGTGGGCGCGGATCAGCCAATGTCCCAGGAGCAGATGTCGGCGGTTGCCGCTGTGGCGCACAACATACGTCAGCAGATGCAAATGGCCGCAGCAGCGCAGCATCAGCACGGGGAAGCGGGGCCGCCGCCAGGGCTATTTAATTTACCACCACATTTGGCAGGTGGGCCGGGTCGGGCTAGCATATCACCGGCATTGAGCAGCGGCTCGAATCCGTCGATAGGCCCACGGCATGCGCCCTCGCCTTGCGGTCCCGCAGGCCTGATGCCGAATCTGCCGCCCAGCATGGCCGTTGCACTGCATCCCGATCTGGGTCTGGAGATGAGCTACAAACGAGAATACTCACCCACGCGACTCTTTGCCGAAGATCTAGCCGATCTGGTCGGTGCCAGCAGTGTCGTAGGCATACCTTCGTCATCCTCCTCGGCGACCAGTGTAACCACCGCGACGACGACAGTGACACACAGTGGGCCAACTGCTGTGGCCAGTGCGGACAGCGGCAGTAGCATTAAGGTGGAACCCATTACCACAAGCAGCGAATAG
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDNKDLKDDGLSSHMPPYGRHSPVFPLQDMTLSYPGASGSMPGSGAAGLSALACPNGMGSGGSAAGSGGGGGAVGADQPMSQEQMSAVAAVAHNIRQQMQMAAAAQHQHGEAGPPPGLFNLPPHLAGGPGRASISPALSSGSNPSIGPRHAPSPCGPAGLMPNLPPSMAVALHPDLGLEMSYKREYSPTRLFAEDLADLVGASSVVGIPSSSSSATSVTTATTTVTHSGPTAVASADSGSSIKVEPITTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00587321; iTF_01554623; iTF_01553890; iTF_01559687; iTF_01551654; iTF_01550206; iTF_01548779; iTF_01550923; iTF_01558956; iTF_01553107; iTF_01552379;
- 90% Identity
- -
- 80% Identity
- -