Drel009122.1
Basic Information
- Insect
- Drosophila repletoides
- Gene Symbol
- bab1
- Assembly
- GCA_018150835.1
- Location
- JAECWQ010000031.1:16826322-16828905[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-18 1.3e-14 53.6 0.0 1 43 55 98 55 100 0.95 2 2 6.3 1.4e+04 -4.1 3.7 8 23 227 245 219 247 0.74
Sequence Information
- Coding Sequence
- ATGCTAGAGAACTCTCACGCCTGGATGGGCGCCACTGGCTCAACGCTAGCAGCAGATAGCTATCAGTATCAGTTGCAGAGCATGTGGCAGAAATGCTGGAATACCAATCAGAATTTAATGCATCATATGAGGTTTCGCGAACGCGGACCACTTAAATCCTGGCGACCCGAAACAATGGCCGAGGCCATATTCAGTGTATTAAAGGAGGGACTTTCACTATCACAAGCGGCACGTAAATACGATATACCCTATCCGACATTTGTACTCTACGCGAATCGCGTGCACAACATGCTCGGCCCATCGATCGACGGCGGACCCGATTTGCGGCCAAAGGGGCGCGGACGACCGCAGCGCATCCTATTGGGTATTTGGCCCGACGAGCATATCAAAGGCGTCATCAAAACCGTTGTTTTTCGCGACACTAAAGATCTCAAGGAGGACAGCCTGAGCGCCCATATGCCGCCATATGGTCGGCATTCGCCCGTATTTCCTTTGCAGGATATGCCGCTTAGCTATCCAGGCGCTAGCGGCGTCATGCCTGGCAGCGGCGCCGCCAGCTTAAGCGCACTGGCCTGCCCGAATGGCATGGGCGTTGGTGGTGCAGCAGGCAGCGCTGGCGGCAGCGGCGTTGGCGTTGGCGTCGGTGCCGAGCAGCAAATGTCCCAGGAACAAATGTCGGCAGTTGCTGCTGTGGCGCACAATATACGCCAACAGATGCAAATGGCACAAGCAGCGGCAGCGCAGCATCAGCACGGGGAGGCGGGGCCGCCGCCGCCTCCGCCGGGACTATTCAATTTGCCGCCCCATTTGGGTGGCGGTGGCGGCGGGCCGGGCAGAGCGAGCATATCGCCGGCTTTGAGCAGCGGCTCGAACCCTTCTCTTGGAGGTCCTAGGCATGCGCCCTCGCCCTGCGGTCCCGCTGGCCTCATGCCGAATTTGCCGCCGAGCATGGCCGTTGCATTGCATCAGATGGGCTATAAACGCGATTATTCACCCACACGGCTCTTTGCCGAGGATCTGGCGGAGCTCGTAGGCGCCAGCAATATGCCGGCCGTGTGCTCGCCAGCAACCAGCGGAACGCCAGCAACAGCTAGCAGCACAGCAGCAACAGTTGCTGCCGCCGCAGCAGCAACATCCAGTGCTGACAGCAGCATTAAAGTGGAGCCCTTAACCACCAGCAGCGAGTAA
- Protein Sequence
- MLENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDLKEDSLSAHMPPYGRHSPVFPLQDMPLSYPGASGVMPGSGAASLSALACPNGMGVGGAAGSAGGSGVGVGVGAEQQMSQEQMSAVAAVAHNIRQQMQMAQAAAAQHQHGEAGPPPPPPGLFNLPPHLGGGGGGPGRASISPALSSGSNPSLGGPRHAPSPCGPAGLMPNLPPSMAVALHQMGYKRDYSPTRLFAEDLAELVGASNMPAVCSPATSGTPATASSTAATVAAAAAATSSADSSIKVEPLTTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00579209;
- 90% Identity
- -
- 80% Identity
- -