Zind004966.1
Basic Information
- Insect
- Zaprionus indianus
- Gene Symbol
- bab1
- Assembly
- GCA_018904595.1
- Location
- JAEIHA010000140.1:3556677-3558896[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-18 9.8e-15 53.9 0.0 1 43 55 98 55 100 0.95 2 2 2.2 5.1e+03 -2.8 0.8 9 17 213 224 204 232 0.50
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCACACGCTTGGATGGGAGCGACAGGGTCCACGCTAGCAGCAGACAGCTATCAGTATCAGTTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAATCAGAATCTTATGCATCATATGCGCTTTCGCGAACGTGGCCCTCTCAAATCGTGGCGTCCCGAGACCATGGCCGAGGCTATTTTCAGCGTACTGAAGGAGGGACTATCGCTGTCGCAGGCAGCGCGCAAATATGACATACCCTATCCGACGTTTGTGCTCTATGCGAATCGAGTGCACAACATGCTGGGACCGTCAATCGATGGCGGCCCTGATTTGCGGCCCAAGGGACGAGGAAGGCCGCAGCGCATACTCTTGGGCATTTGGCCGGATGAGCACATCAAGGGCGTCATCAAGACCGTGGTTTTTCGCGACACTAAGGACATTAAGGACGACGGTATGGGCGGTCATATGCCGCCATACGGCCGGCATTCGCCCGTATTTCCTTTGCAGGACATGTCGCTAAGTTATCCCGGCGCTAGTGGCAGCGCAGCCAGCCTAAGCACCTTGGCCTGCCCCAACGGTGGTGGTGGTGGTGGCGGCGCAGTTGGCCCCGGCGATCAACAAATGTCCCAGGAGCAAATGTCGGCGGTGGCCGCTGTGGCGCACAATATACGTCAGCAGATGCAAATGGCCGCCGCAGCGCAGCATCAGCACGGGGAGGCGGGGCCGCCGCCAGGGCTGTTCAATTTGCCACCGCATTTGGGAGGTGGACCCGGGCTGGAGATGAGTTACAAACGGGAATATTCCCCCACGCGTCTCTTTGCCGAAGATCTTGCTGAATTAGTAGGCGCCGGCAGCGGCGTCGGCGTCGGCATGCCCTCCTCCTCTTCTTCGGCAACCAGTGTTACCACCGCGACAACAACAACGGGCGCAGCAGCGGCTGCTGCGGCAGCGGACATATGTTCCAGCAGTAGCGGCGGCATCAAAGTGGAACCCATTACCACGAGCGGCGAATAG
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDDGMGGHMPPYGRHSPVFPLQDMSLSYPGASGSAASLSTLACPNGGGGGGGAVGPGDQQMSQEQMSAVAAVAHNIRQQMQMAAAAQHQHGEAGPPPGLFNLPPHLGGGPGLEMSYKREYSPTRLFAEDLAELVGAGSGVGVGMPSSSSSATSVTTATTTTGAAAAAAAADICSSSSGGIKVEPITTSGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00579209;
- 90% Identity
- iTF_01558215;
- 80% Identity
- -