Dpru004844.1
Basic Information
- Insect
- Drosophila pruinosa
- Gene Symbol
- -
- Assembly
- GCA_018150935.1
- Location
- JAECWR010000199.1:16034016-16063871[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.7e-11 7.2e-08 32.1 0.0 1 40 343 383 343 386 0.90 2 4 5.9e-14 1.6e-10 40.6 0.1 2 39 398 435 397 438 0.94 3 4 1.4e-17 3.6e-14 52.2 0.0 1 45 452 497 452 497 0.98 4 4 1.3e-19 3.4e-16 58.7 0.0 1 43 504 547 504 548 0.96
Sequence Information
- Coding Sequence
- ATGGCACGTTTTGAGGTCCGTCGCAAGTCCAATCATGCCAAGCAGAGACAGCGACGTCGAGGTCTGCTGCGTACGGCGGAACAACTGAAAATCAAAGGACTCTGCGAGCCGGCTGAGAATGCGGATGATTTGAATGACGCTGCATCGGCGACGATAACCGTGTCGGAGAACATACAGCAGGCCGTGGTTGGCAACATTAATCAAACATCGATTGTGAGTCTACAGCAAACAGCCGACGGCAATTATATACCCGTAACGGCTGGCGACGATTCCGATAGCGATAATAAGCCGCAAAAGATCTGCAAGACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCCGCATCTGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAATAAAATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTAAGCGTGCCCATGGGATTTCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACACCAGTTACCGTTACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATATCGCATCATCACACAACAGGCGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGCGAAATCAAGCATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACTGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAAAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTGGCAGCGTTTGCGGCCCTGGCGCCGGTGGTGTTGGTGGTGGTGGCGGTGGCGGCATTGGTGGTGGTGGTAGTGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTGCGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGTGCACATCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCCTGGAATGAGGATGCCTTACAGAATGCCTTGGAGGCGTTGCGTTCGGGTCAAATATCGGCGAATAAGGCATCGAAAGCGTTTGGTATTCCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGACTTGGAGCGTGCATTGGAGGCGATACGCGCTGGCAATACGTCGGTGCAGAAGGCTAGCGCTGAATTTGGCATACCCACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTATCACGTTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTCTATGGGCGCTTCAAGCGTGGCAAATACGATGTTGCGGCCAATACCAGTGGCGTCTCGCTGATTAACACATCGGGCAACACGACCGGCAGCATTGAGATTATTGAGCATAGTCAGGAGAATTCGGTAGGACCATCACCGACCACGCCAACAGCTGGTGGCGTTGGCGCTGGTGTCTCCGGTTCCAGTCGACGTCTTGTGCATTTGACAGGCGGCATCGGCGGAGGCGGCAGCAGCAGCAGCAGCAGCAGCGGCGGTGGCAACAATCGTGGAGCAGCCATGGGCAATGTTGTTGGCTGGCTGAAGCAGGCTTCCATTGAGGTGCGAGACGCTGGCACCCGAACACTGTCGATGCTACAGAGCACCAATCCCAATTTTCGCTCACTCGACCTATCGCTGGCACCGACCGTATCCGTATCCGCCTCGTCCGGCAGCGTGCCGACCACAACAAGTGCTGAGGGTTCATTGAGCGGCTCGATAATCTCGGCTGGCTGTATTGGCATTGCCCAGGACGAGGAGACCTGCGATACCAAATTGCTGACACGTACACGAGCCTACGCGTCCGTTAGCCAACCGCAGAGTCCGCGGCATCGTGTGCGTGGCACACCCAACGGTCTGACCGGACGTTCCACATCGATATCATCGCAGCTGGAGAAGACCAAGAAGCTGCTGAAGATGACAGAGGGCGAGGATAAACCATTGACCATATTGCACTACAACGATGTCTACAACATCGAGTCGATGGCCGAAACAGAGCCCATTGGTGGCGCTGCCCGTTTTGCCACCGCCATCAAAAGCTATGCACATTTGAATCCCCTGGTTCTATTCAGCGGCGATGCCTTCTCGCCCAGCATGCTGAGCACCTTTACACAAGGCGAACAGATGATTCCAGTGCTCAATCAAGTGGGCACACACTGTGCTGTCTTTGGCAATCACGATTTCGATCACGGCCTGGATGTGCTGGTCAAGCTGATTAAGCAAACTGAATTTCCCTGGCTAATGTCCAATGTGGTTGACAACGAAACTGGTCGTCCACTGGGCGGTGGCAAAATCTCTCACTTTATATTGCACAATCAAATCTCGATTGGTCTAATCGGCCTCGTGGAACGGGAATGGCTGGAAACATTGCCCACCATTGATCCCACCGAAGTCACCTACATTGATTATGTGGAGGCTGGCAATCGACTCGCACGTGAGCTGCGCAACGAGGGCTGTGATCTGATCATTGCTCTCACTCACATGCGAACGCCCAACGATATTAATCTGGCCGAGAAATGCAATGGCATTGACATCATCCTTGGCGGACACGATCATGTGCGTGAGGTGACCGAAATCAATGGCAAAATGATTGTCAAGTCTGGCACAGATTTTCAACAATTCTCTGTCATAACTATTGAGCGGCAGGCCAATAATCGGACACAGTTCACAACGGATGTCCAGTGTATGGATGTAACGGCCAAAATACCCGAAGATCCAGTGCTCAAAGAGGAGCTCTCCAAATATGCCAAGTTCATAGAGAGCAAACTAAAGGATGTGATGGGCATATTCAGCGTGGAACTGGACGGACGCTTCTCGCGTGTTCGCACCCAGGAGACAAATCTAGGCAACTGGGTGTGCGATGTCGTTTTGGCGGCAGTTGGCGCCGATGTGGTCATCATTAATGGCGGCACCTTCCGTTCGGATCGCATACATCCGGTGGGGCCCTTTACAATGGGTGATCTGGTCAATGTTATACCCATGAGGGATCCGTTGATTCTGCTGGAGGTTAAGGGACAAGTGTTGTGGCAAGCACTGGAGAATGGCGTCTCTGCCTATCCAAAGCTAGAAGGTCGCTTTCCTCAAGTGGCTGGCATAAGCTTTGCCTTTGATCCACAGGCTGCGCCTGGCAAACGCATCGATCCACAGCTCATTCAAGTGGGCGATGAGTATCTCAATCTTGAGCAGACCTACAAGCTGTGCGTCAAGAGCTACATCTTCATGGGCTGCGATGGTTACACCATGTTCAAAGATGCCAAAGTGCTGATGGATGACGATGCCTGTCCAGAGTTGGGCATAACGCTGCAGAATCACTTCAAAGCGATCAATTCCCGCAAATGCGGACAGAATACAAAACATCGGCAATCGCTGGTGACGCTCTCCCGCAGGCATAGCCTGGTGCAGTGCTTGGACAGCATGGATCTCGATGGACCATCGCCCATACGGAAGCTGTCTGTGGGACATCACAACAAATCCATGGATCTAACGCATGGCAATTCACAAAAGGCAAAATAG
- Protein Sequence
- MARFEVRRKSNHAKQRQRRRGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNINQTSIVSLQQTADGNYIPVTAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAASGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLSVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTTGDESNSNLVQHIKSEIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGIGGGGSAGEKGQFNGPKAWTQDDMNCALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVAANTSGVSLINTSGNTTGSIEIIEHSQENSVGPSPTTPTAGGVGAGVSGSSRRLVHLTGGIGGGGSSSSSSSGGGNNRGAAMGNVVGWLKQASIEVRDAGTRTLSMLQSTNPNFRSLDLSLAPTVSVSASSGSVPTTTSAEGSLSGSIISAGCIGIAQDEETCDTKLLTRTRAYASVSQPQSPRHRVRGTPNGLTGRSTSISSQLEKTKKLLKMTEGEDKPLTILHYNDVYNIESMAETEPIGGAARFATAIKSYAHLNPLVLFSGDAFSPSMLSTFTQGEQMIPVLNQVGTHCAVFGNHDFDHGLDVLVKLIKQTEFPWLMSNVVDNETGRPLGGGKISHFILHNQISIGLIGLVEREWLETLPTIDPTEVTYIDYVEAGNRLARELRNEGCDLIIALTHMRTPNDINLAEKCNGIDIILGGHDHVREVTEINGKMIVKSGTDFQQFSVITIERQANNRTQFTTDVQCMDVTAKIPEDPVLKEELSKYAKFIESKLKDVMGIFSVELDGRFSRVRTQETNLGNWVCDVVLAAVGADVVIINGGTFRSDRIHPVGPFTMGDLVNVIPMRDPLILLEVKGQVLWQALENGVSAYPKLEGRFPQVAGISFAFDPQAAPGKRIDPQLIQVGDEYLNLEQTYKLCVKSYIFMGCDGYTMFKDAKVLMDDDACPELGITLQNHFKAINSRKCGQNTKHRQSLVTLSRRHSLVQCLDSMDLDGPSPIRKLSVGHHNKSMDLTHGNSQKAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00478640; iTF_01554619;
- 90% Identity
- -
- 80% Identity
- -