Basic Information

Insect: Zaprionus kolodkinae
Gene Symbol: -
Assembly: GCA_018901885.1
Location: JAEIFM010000037.1:7584457-7615699[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 9.6e-12 2.2e-08 33.5 0.0 1 40 242 282 242 285 0.90

2 4 6.9e-14 1.6e-10 40.4 0.1 2 39 297 334 296 337 0.94

3 4 1.2e-17 2.9e-14 52.4 0.0 1 45 351 396 351 396 0.98

4 4 7.9e-20 1.8e-16 59.4 0.0 1 43 403 446 403 448 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	9.6e-12	2.2e-08	33.5	0.0	1	40	242	282	242	285	0.90
2	4	6.9e-14	1.6e-10	40.4	0.1	2	39	297	334	296	337	0.94
3	4	1.2e-17	2.9e-14	52.4	0.0	1	45	351	396	351	396	0.98
4	4	7.9e-20	1.8e-16	59.4	0.0	1	43	403	446	403	448	0.96

Sequence Information

Coding Sequence: ATGAAAACAGAAATAGGTGAAGCAAAGGTAGAAAGAGTTGTAGGTCTGCTACGCACTGCGGAACAATTGAAAATCAAAGGACTCTGCGAGCCTGCTGAGAATGCTGATGATCTGAATGACGCTGCATCGGCGACGATAACCGTGTCGGAGAATATACAACAGGCGGTGGTTGGGAATATTGTGAATGCGAGTCTTGTGCCTGAACAATCGGTGGCCTCGCCGGCATCCACATCGTCCACATCGAATAATGCCGGTGCTGCTGGTCAAGTGAGCGGTCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAATAAAATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGATTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTTACCGTTACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAACATGTACAATTCGGATACGAGCGAGGATTCGATGATGATCGCCAATGGTTCGCCGCACGATCAAAATGAACCACACTATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATATATGGCATACCCTCGACAACATTATGGCAACGTGCACATCGTTTGGGCATCGAAACGCCCAAGAAGGAGGGCGGTACGAAATCATGGAATGAGGATGCCCTACAGAGTGCACTGGAGGCATTACGTTCGGGTCAGATATCGGCAAATAAAGCATCGAAAGCTTTTGGTATACCCTCATCGACGCTCTATAAGATAGCGCGTCGTGAGGGTATACGATTGGCGGCGCCATTCAATGCCGCACCAACCACATGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGTGCCGGTAATACGTCGGTGCAAAAAGCGAGTGCTGAATTCGGTATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTATCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAGATGTCCATCAATCAGGCGGCCATACACTATAACCTGCCCTACAGCTCGCTTTATGGGCGCTTCAAGCGCGGCAAATATGATGTGGCCAATACCAGCGGAGTCTCGTTGTTAAACGCTTCGGGCAACACCACCGGCAGCATTGAGATTATTGAACATAGTCAGGAGAATTCGGCTTCCATTGAGGTGCGAGACGCTGGAACCCGCACGCTGTCCATGCTACAGAGCACAAATCCGAATTTTCGCTCTCTAGACTTGACACTAACCCCAACTGTCGCGGTTTCGGCCTCATCAGGCAGTGTGCCGACCACAACGAGTGCTGAGGGTTCGTTGAGTGGTTCCACAATCTCCGCTGGCTGCATTGGGATTGCCCAGGACGAGGATACCTGCGATACTAAGCTACTGACACGCACCCGAGCCTACGCATCTGTTAGCCAACCGCAAAGTCCGCGACATCGTGTACGTGGTACACCCAACGGCCTGCACGGACGTTCCACATCGATATCATCGCAGCTGGAGAAGACCAAAAAGCTGCTCAAGATGACAGAGGGCGAGGATAAACCCTTGACCATATTGCACTACAACGATGTCTATAACATTGAGTCCATGGCCGAAACGGAGCCAATCGGTGGTGCTGCACGCTTTGCCACCGCCATCAAGAGCTATGCGCATCTCAATCCGTTGGTGCTCTTCAGCGGAGATGCCTTCTCGCCGAGCATGTTGAGCACCTTCACGCAGGGAGAGCAAATGATACCCGTGCTTAACCAGGTGGGCACCCACTGCGCCGTCTTTGGTAATCATGATTTCGATCACGGCTTGGATGTGCTTGTCAAGCTGATTAAACAAACCGATTTCCCTTGGCTCATGTCCAATGTGGTTGACAACGAAACTGGTCGTCCCTTGGGTGGTGGCAAAATCTCACACTTTATATTACATAATCAAATCTCAATTGGATTGATTGGTCTGGTTGAGCGTGAATGGCTGGAAACCTTGCCCACAATTGATCCCACCGAAGTTACGTACATCGATTATGTGGAGGCTGGGAATCGTTTGGCTCGTGAGCTACGCAACGAGGGCTGTGATCTGATTATTGCCCTCACCCACATGCGTACACCCAATGATATTACTCTGGCGGAGAAATGTAATGGCATCGATATCATATTGGGTGGACATGATCATGTGCGTGAAGTTACGGAAATCAATGGCAAAATGATTGTTAAATCTGGCACAGATTTTCAACAGTTCTCGGTCATAACCATCGAGCGACAGCCCAACAATCGCACACAGTTCACCACAGATGTGCGTTGTGTGGATGTGACAGCGAAAATTCCGGAGGATCCGGTACTGAAGCAGGAGCTGTCCAAATATGCCAAGTTCATCGAGAGCAAGCTGTCGGATGTGATGGGTGTCTTCAGTGTGGAGCTCGATGGACGCTTCTCTCGCGTGCGTACACAGGAAACCAATCTTGGCAATTGGGTGTGTGATGTTGTCTTGGCTGCTGTGGGTGCCGATGTGGTTATATTGAATGGTGGCACATTCCGCTCGGATCGTATACATCCTGTGGGCGCCTTCACCATGGGTGACTTGGTTAATGTTATACCCATGCGAGATCCATTGATACTGCTCGAGGTTAAGGGACGTGTACTGTGGCAGGCATTGGAGAATGGTGTATCCGCCTATCCAAAGCTAGAGGGACGATTTCCTCAGGTGGCTGGCATTAGTTTTGCCTTCGATCCACAGGCTGCGCCTGGCAAACGCATCGATCCGCAGCTCATACAAGTGGGCGATGAGTATTTAAATCTGGAACAGACCTATAAACTGTGCGTCAAGAGTTACATATTCATGGGCTGCGATGGCTACACCATGTTCAAAGATGCCAAAGTGCTGATGGATGATGATGCCTGTCCAGAGTTGGGCATAACACTGCAGAATCATTTCAAGGCAATCAATTCACGTAAATGTGGACAGAATACAAAGCATCGACAGTCCCTGGTGACGCTTTCACGCCGGCACAGCCTGGTGCAGTGCCTGGACAGTTTGGATCTTGATGGTCCGTCGCCCATACGCAAATTGTCGGTGGGTCATCACAACAAGTCGATGGATTTAACGCATGGCAATTCGCAGAAGATGCTGCGTCGCGCTTCGCTAGATGATTTGGAACAGTCCACATGCGATTTGGCGCCACAGTTGGAACATCGTATTATTATGATACAAAACGAGGAGCATCATCGTCAACTGCTGTACAAGAAGGAGACGCACATTATGAACTCAACGATTACCGAAGCAGAGGACGAGTAA
Protein Sequence: MKTEIGEAKVERVVGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNASLVPEQSVASPASTSSTSNNAGAAGQVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNMYNSDTSEDSMMIANGSPHDQNEPHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQSALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSGVSLLNASGNTTGSIEIIEHSQENSASIEVRDAGTRTLSMLQSTNPNFRSLDLTLTPTVAVSASSGSVPTTTSAEGSLSGSTISAGCIGIAQDEDTCDTKLLTRTRAYASVSQPQSPRHRVRGTPNGLHGRSTSISSQLEKTKKLLKMTEGEDKPLTILHYNDVYNIESMAETEPIGGAARFATAIKSYAHLNPLVLFSGDAFSPSMLSTFTQGEQMIPVLNQVGTHCAVFGNHDFDHGLDVLVKLIKQTDFPWLMSNVVDNETGRPLGGGKISHFILHNQISIGLIGLVEREWLETLPTIDPTEVTYIDYVEAGNRLARELRNEGCDLIIALTHMRTPNDITLAEKCNGIDIILGGHDHVREVTEINGKMIVKSGTDFQQFSVITIERQPNNRTQFTTDVRCVDVTAKIPEDPVLKQELSKYAKFIESKLSDVMGVFSVELDGRFSRVRTQETNLGNWVCDVVLAAVGADVVILNGGTFRSDRIHPVGAFTMGDLVNVIPMRDPLILLEVKGRVLWQALENGVSAYPKLEGRFPQVAGISFAFDPQAAPGKRIDPQLIQVGDEYLNLEQTYKLCVKSYIFMGCDGYTMFKDAKVLMDDDACPELGITLQNHFKAINSRKCGQNTKHRQSLVTLSRRHSLVQCLDSLDLDGPSPIRKLSVGHHNKSMDLTHGNSQKMLRRASLDDLEQSTCDLAPQLEHRIIMIQNEEHHRQLLYKKETHIMNSTITEAEDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00579206;
90% Identity: -
80% Identity: -