Dpro003556.1
Basic Information
- Insect
- Drosophila prosaltans
- Gene Symbol
- -
- Assembly
- GCA_018151275.1
- Location
- JAECWY010000712.1:3028985-3034779[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0099 0.87 10.4 0.3 1 23 1310 1333 1310 1333 0.95 2 13 7.1 6.2e+02 1.4 0.2 1 23 1495 1517 1495 1517 0.91 3 13 0.00016 0.014 16.0 2.7 2 23 1520 1541 1520 1541 0.97 4 13 0.0001 0.0089 16.6 0.9 3 23 1549 1569 1547 1569 0.98 5 13 5.1e-07 4.4e-05 23.9 4.1 2 23 1576 1597 1575 1597 0.97 6 13 4.8 4.2e+02 1.9 0.4 5 23 1610 1628 1608 1628 0.96 7 13 1.2 1e+02 3.8 5.4 3 23 1635 1656 1633 1656 0.93 8 13 0.13 11 6.9 0.2 2 23 1667 1687 1666 1687 0.96 9 13 4.9e-05 0.0042 17.7 0.4 1 19 1693 1711 1693 1715 0.95 10 13 3.1e-05 0.0027 18.3 0.4 1 23 1723 1745 1723 1745 0.98 11 13 9.1e-05 0.0079 16.8 7.6 1 23 1751 1773 1751 1774 0.96 12 13 0.00018 0.015 15.9 5.9 1 23 1779 1801 1779 1801 0.98 13 13 0.025 2.2 9.1 8.2 1 23 1807 1829 1807 1830 0.95
Sequence Information
- Coding Sequence
- ATGGTCGACAGTGTTCAGTGCCCCGTGTGCACTTTGTATTTGCATGCGGGCATGAATCTATCCGATCATCTGGAGACACATCCCAAGGAGCAGGTTATAAAGGCATTGGTGCAAATGACAATTGTTGGCAACAGCAACAATGGCATGGGCAGTGCTTTGGCGGCGGCCATGCTTGCCACATCTGCTCCAGATAATGCAACCTCACCATCTGCAACCGCATCATCGTCATCATCCGCGATCGTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTGGCATCGCCGCCACCGTTATCTTCCTCCATTGCTGCTGGCTCTACAAACAAATTGAATAATCCACCGAATAAGGCAACATTGAAAAGCGCTCCGCCCATGCCCACAAGCACTTTGACTGAGGCATCAGCCACCAAACCATCTGCACCCACCAACACCACCACAATATATCAGCCAACATTGGCCACGGATTATGGCTATGAACAGCAAGCGTCTGCTCCTCCTCCCTCACAGCAGCAGCAGCATGGTTTTTCCCGTGGAGCCACTGCCACATTGGTTATACCACAAGTGCCGCAGCAGCATTTCCTGGCCAACCAGCAGCAGCAACAACAACAACAGGCACTGTTTGCTCATCAGCAGACACAACCTGGACTAAAATATACCTATGGAAATACCTCGCTGCCTCCGCCGCCGCCGTTGCAGATCTTTACGCAGCAACAGCAGGCGGCAACGCAGCAAACACAATCACATCAGAAGCCCCCACCCGCTTATGGAGCCGCCATCAGTCAAATTCGATCTCAGCATAACCAAAACAAGCAGCAGCACCACCTCCACCAACACCACCAGCAGCTAAATTTGCATCACAATATAAACCTGGCACCACCGACCAATGGAACTGGCAAACAGCAGCAGCAGCAAGCTACTAATAAAGTTCTAACAGAAGTATTTCTGAATCCCCCACCACCTCCGCCGCCGCCGCCAACAACAACAACACTGCCAGTTGCGCAGCCACAACATCATCCGCACCATCATCATCAACAACAGCAGCAGCAACAATCCGTGATGCCAAGATTGCCAGCTCAGTCATTGATGACCCTTACAACGAGTTGTACTGCATCCACCTCCATTTCATCATCAGGATCATCTTCGGTTCGAGTCAGTCGGCAAACAAATTCACCATTTGGAGCTCTGCTTAATGCGGCTGCTGCAGTTGCCTGCGCCTCATCTTCATCTTCGTCCTCATCCGTGCTACGTTATGCCGAATCACCAGTGGCCCATTATTTGGAGCGGGAAAATGGGGATTTTATTGTTCAAGAGACGCCCAAGCATATTGTAGAGTGTGTGGAGAAGGAAGATGGTGAATTTTCAGTGATTGAACGCATATATCAATCGCCCCCAAGTGTACTTCATTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCGAGGAGAATAGTCGTAGTCGAAATCCAAGCAAAACAACGAAAAAGTCACGCAAATCCAAACCGAAAAGAGCTCCCAAGCAACAGGCGCAGCATCAGCAGCGAATTTGCAATGAGGAGGAGTTCATGAGCTTAAGCAGCGGAGCAGAAAGCGAAGTGGAAAACGAAAAGGAGAGACGTGAGCAGAAAATCAAGCAATTGGAGGCATCACAGCAGCCGCCACTTTGCTCGGCACCATCCACAAGCGGAGCAGCAGCGACAGCAGGATCAGCTGTAGTTACAGGCACCGCAGCAGCTGCTGGCTCAGCGGATGGATCTTCCAATTCCACTTCCACAAAATCCAAGAAGAATCGTATTACAGTGCTTAGTGATGTGCCTCTTAATATGAACGAATATCTGGATTTAATGGGTAACATTGTGGCCTCCAGTCGCATTGGCCAGGCACGTCCCTTTGCTGCCGTCGCTCCTATACCTCTGGTGAAAGTGGAAAAGGAAGAGCCACTGGATGATGACTATGATAATGAGAGTGTAGCGGAAACAGTTTCATCGATACCGCCAGTGGAGCAAAAGCCCAGTTTGGGCACCACCAGCGTAATCCGTATGGCTAGCACCACCACCACCAGTAGTAGCAGCAGCCTTACTACTGCCGAAGATCTCACCCAGCCACCGCTTATGAAGATTGAGGTGGAGCCAACAACATTGCTAGCGCCACGCTTCTCGGCACCAGCGCCGACAACTCAGCGTGGTCCCAAGAAGTTAGTGATTAAACCAAAGGCCACGACGACGACGACAACAACGAAAAAGACTGACACCCCCATAATACCATCATCGTCATCATCTTCCACCAACAGCACCAACTATTCTCCTACTTCTACCAAACAAATCATATCAAATGGAAACGCCGATGGGGCCATTCCTGCTCCCGTCTTCACTGAGATGGTGCAAATCAAAAGCGAGACTCTGGAGGCTCCGTCAACGAGCAGCAATAGCATATTGGAGAAGCATCTGACGAAGAGGAAACACTCGACGGTTAATGATGATGATGCTCGTGTCCTGCTCGACTTTGCTAATTCCAAACAGTCGCCCACATTGATTGGTGGAACCACATCCAATACCACATTTGTTGTTAATGCCAACGCCTCTGGTTTTCCCTCGGCTGGATCTGTTTTTGCCAGTAATACGGCGGCAAATCCTAACCAGAGCGTCGGCAAACCGGGCGAGGAATATATATTGCCCGATAATAATCTGGAGGTGGATGAAATTGTGATATCATCGTCGTCTTCCTACGCAGCCTCATCCGTTTCGCAGATCCAGAATCAAGCCCAGATGCAGGCAGCCGCCCACTCTCAGGGTCAGGCAGGTACGGCGGCGGGGTCATCATTTAATGACTTTAACTTCCTGTACCATCAGACGACAACAAACCAGACAGCAGGAGCAACTTCCATGGGTGGTGCCTATTTCACGCCCTTTGCTCGACAGCAGCAACTACAGCAAACTCATCATGGAGCGAGTGAGGCCACCAATGCAGCTACATTGGCCTCATCTTCAAGCAATTCCTCGGCATTGGATCATGATTCAATGAATGCCACTTTCCGTGTAACAAAGACACAATCCTCGCACTCCTGGTACCATCCAGTCCAGCAACAGACATCGGCAACAGTTGGAGCGACAGCAGGCGGAGGAGGTGGCTCATCATCTTCGCACAATCACGATTTGGCGGCCCAGCCAACTAATTTTAATGCTGCATTGGCTGCCGTAGAATGCTGCAGTGTGGCTGTGGATGGTGATGCCAAGGCATATTTGGATCTTGATGCCTGCAAACGAGAACAGTTGAGCAATAGCAGCAATTTACCATCGGTTTCTGCATCGACAACATCATCATCGTTTGCCGGTGCTGGCACTGAGAGCAGTCTGGTTGGAGGGCTCAACATTCGCACCGATGAGAAAATGCCCGCCAAGGGTGAAATATCCGAGCAGGAGAGCAATTGCGACATTGAGAACTCTTGGAGTCAGTCGATGTACGGCGACATATCACAGCGCTACTTTAGAAATCAATTCTCTGGTGGCTATAATACCGACTGGCGTCAAGATTATTATCCAGCACAGGATCTCAGCGCTCAGCAGCGGGAACACAAGCGTTTTGATTTTAATGCGGTCGACGAAGAGGTTTCCTCTATGTCCAGAAAGAGTTCACCCTTACCCACCGCTTCCACCTCATCGTCATCCTCGGCATTGTTGGCTGGTCCACCAATAGCCTCCACCTCTAGGGCAGCAGCTGAGGCAGCGGCCGAAGCAGCTGCAGCAGCAGCAGCTGTCGCCGCATTGGCTCAGCGTAAGCCGCCGCCGCGTCGCAAAATCTACAAGTGTCCTCACTGTGAAGCCATCTTTGAGAAGCTGAAAGAGCGGAATGCGCATATGATTGGCGAACACAACTATGTGCGTCAGAATCGTCGTTTGATTTGCACACAGCCGTTAATCAGTTCGTCCAGCATGTTGCCACCTCAGCCACAGCAGCATCAGCAACAACAACAGCAACAAATGTTACTCCAAGCTGGACATGGAATAATGCAAGAAGATTCAAAAGATGGCATTGTTAAGATCAAGCAAGAGCATTGCCAGGACAAGCACGATTCCGAGCAGCAGCTACTGGATCATGCTGAGCTGGCGGACATGAAGGATGCGGAATTGCTTGGACATGTAGCTGTCACAGACGGTGGCGATATTAAACCACCAGGCGTTGGTAGTGCTGGTGATTTAGATGAAAAGCCAGCCATGCCACCTCTGGCAATGACCACTCCCGCTGCCAAGTTGGCCGCCCTATACCGAATGCTAATGGCCTACAACGAATCCAAACTTGGCCAAGAGCGCAACAGCATTAGCGAACTGGAACAGAAAGCCATGGAGAAATCTATATTTCTGTGCTATGTGTGTCGCACTGATTTCCCATCCGTCAAACTGTACGATGCACATCTCACAGAGCATCCAGCCGAATGTTTCACCTGTGGCAAGAAATTCTATCGCTGGAAGAACTTTTCACTCCATCTAAAACGTCACTTGGGCTGGAAGGAGTTTGGCTGTTGTGTGTGCGACAAGAAGTTTGTGGTGCGTAGTGCCCTTGTGGAGCATATGCGCATGCATACTGGCCAGACACCGCTCAAGTGCAAGATTTGCGGTAAAAAGTTTAAGCGCTATTCCAATTTGACGCAGCATCGCAAGCGACACACAAAAATGATGGTACGAAAGAAGGAATATGTATGCCATTGCGGTGAGGTATTGCCTTCAAAGGCACGGTTTCTTTGGCACAAGGAGACGCACGATCTGAAGCCCAAATGTTGTCCGTATTGTTGTGATCGCTTCGTTCATGCCAATTCCCTGCGTCGCCATATACGTTTGGCCCATTCGGATAAATTCGATTATGCCGAACCCATGGAATGCCCAATGTGCAAACAGATCTTTGCCAAGACCTCCATTAAGGCACACATGGCCACACATTCGACAGATCCGCAATACGATTGCGCCATCTGTAATAAGAGCTTCTCAACCAAATGGAATCTTAAAATCCATTCCTGGGTGCATGCCAATCGCACTGCCAAGCCCTTTAAGTGCGAGTACTGCCCAAAGGCGTTTGTGCGTGAACTAGACTTTAAGAATCACATCAATGCCCACAAGCAGATCAAGCCGTATACGTGCGAGTATTGTGGGTGCAAGTTTATACGGAAATACAATTATATGCGGCATCGGCGCGAACATCATGGCAACAAGATGTTTACCTGTGATCAGTGCGACAAGTCCTTCCATCGACACTACTATCTGATCGAGCATCGTCGAATTCATACTGGAGAACGACCCTTTCATTGCACAATCTGCGGCAAAAGCTCCACAACAAAAACCAATCACAACAAGCATCTGAAGATCCATCACTCACGCGATCCATTCACCGTGGAAGTTTAG
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNSNNGMGSALAAAMLATSAPDNATSPSATASSSSSAIVDXXXXXXXXXXXXXXXXXXXVASPPPLSSSIAAGSTNKLNNPPNKATLKSAPPMPTSTLTEASATKPSAPTNTTTIYQPTLATDYGYEQQASAPPPSQQQQHGFSRGATATLVIPQVPQQHFLANQQQQQQQQALFAHQQTQPGLKYTYGNTSLPPPPPLQIFTQQQQAATQQTQSHQKPPPAYGAAISQIRSQHNQNKQQHHLHQHHQQLNLHHNINLAPPTNGTGKQQQQQATNKVLTEVFLNPPPPPPPPPTTTTLPVAQPQHHPHHHHQQQQQQQSVMPRLPAQSLMTLTTSCTASTSISSSGSSSVRVSRQTNSPFGALLNAAAAVACASSSSSSSSVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREENSRSRNPSKTTKKSRKSKPKRAPKQQAQHQQRICNEEEFMSLSSGAESEVENEKERREQKIKQLEASQQPPLCSAPSTSGAAATAGSAVVTGTAAAAGSADGSSNSTSTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGQARPFAAVAPIPLVKVEKEEPLDDDYDNESVAETVSSIPPVEQKPSLGTTSVIRMASTTTTSSSSSLTTAEDLTQPPLMKIEVEPTTLLAPRFSAPAPTTQRGPKKLVIKPKATTTTTTTKKTDTPIIPSSSSSSTNSTNYSPTSTKQIISNGNADGAIPAPVFTEMVQIKSETLEAPSTSSNSILEKHLTKRKHSTVNDDDARVLLDFANSKQSPTLIGGTTSNTTFVVNANASGFPSAGSVFASNTAANPNQSVGKPGEEYILPDNNLEVDEIVISSSSSYAASSVSQIQNQAQMQAAAHSQGQAGTAAGSSFNDFNFLYHQTTTNQTAGATSMGGAYFTPFARQQQLQQTHHGASEATNAATLASSSSNSSALDHDSMNATFRVTKTQSSHSWYHPVQQQTSATVGATAGGGGGSSSSHNHDLAAQPTNFNAALAAVECCSVAVDGDAKAYLDLDACKREQLSNSSNLPSVSASTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFSGGYNTDWRQDYYPAQDLSAQQREHKRFDFNAVDEEVSSMSRKSSPLPTASTSSSSSALLAGPPIASTSRAAAEAAAEAAAAAAAVAALAQRKPPPRRKIYKCPHCEAIFEKLKERNAHMIGEHNYVRQNRRLICTQPLISSSSMLPPQPQQHQQQQQQQMLLQAGHGIMQEDSKDGIVKIKQEHCQDKHDSEQQLLDHAELADMKDAELLGHVAVTDGGDIKPPGVGSAGDLDEKPAMPPLAMTTPAAKLAALYRMLMAYNESKLGQERNSISELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCCVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKMFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00556098;
- 90% Identity
- iTF_00483936;
- 80% Identity
- -