Basic Information

Insect: Drosophila austrosaltans
Gene Symbol: -
Assembly: GCA_035045865.1
Location: JAWNOQ010000049.1:1657082-1662879[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.011 1.2 10.4 0.3 1 23 1311 1334 1311 1334 0.95

2 13 7.9 8.9e+02 1.4 0.2 1 23 1496 1518 1496 1518 0.91

3 13 0.00018 0.02 16.0 2.7 2 23 1521 1542 1521 1542 0.97

4 13 0.00011 0.013 16.6 0.9 3 23 1550 1570 1548 1570 0.98

5 13 5.6e-07 6.3e-05 23.9 4.1 2 23 1577 1598 1576 1598 0.97

6 13 5.3 6e+02 1.9 0.4 5 23 1611 1629 1609 1629 0.96

7 13 1.3 1.5e+02 3.8 5.4 3 23 1636 1657 1634 1657 0.93

8 13 0.14 16 6.9 0.2 2 23 1668 1688 1667 1688 0.96

9 13 5.4e-05 0.0061 17.7 0.4 1 19 1694 1712 1694 1716 0.95

10 13 3.4e-05 0.0038 18.3 0.4 1 23 1724 1746 1724 1746 0.98

11 13 0.0001 0.011 16.8 7.6 1 23 1752 1774 1752 1775 0.96

12 13 0.0002 0.022 15.9 5.9 1 23 1780 1802 1780 1802 0.98

13 13 0.028 3.1 9.1 8.2 1 23 1808 1830 1808 1831 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.011	1.2	10.4	0.3	1	23	1311	1334	1311	1334	0.95
2	13	7.9	8.9e+02	1.4	0.2	1	23	1496	1518	1496	1518	0.91
3	13	0.00018	0.02	16.0	2.7	2	23	1521	1542	1521	1542	0.97
4	13	0.00011	0.013	16.6	0.9	3	23	1550	1570	1548	1570	0.98
5	13	5.6e-07	6.3e-05	23.9	4.1	2	23	1577	1598	1576	1598	0.97
6	13	5.3	6e+02	1.9	0.4	5	23	1611	1629	1609	1629	0.96
7	13	1.3	1.5e+02	3.8	5.4	3	23	1636	1657	1634	1657	0.93
8	13	0.14	16	6.9	0.2	2	23	1668	1688	1667	1688	0.96
9	13	5.4e-05	0.0061	17.7	0.4	1	19	1694	1712	1694	1716	0.95
10	13	3.4e-05	0.0038	18.3	0.4	1	23	1724	1746	1724	1746	0.98
11	13	0.0001	0.011	16.8	7.6	1	23	1752	1774	1752	1775	0.96
12	13	0.0002	0.022	15.9	5.9	1	23	1780	1802	1780	1802	0.98
13	13	0.028	3.1	9.1	8.2	1	23	1808	1830	1808	1831	0.95

Sequence Information

Coding Sequence: ATGGTCGACAGTGTTCAGTGCCCCGTGTGCACTTTGTATTTGCATGCGGGCATGAATCTATCCGATCATCTGGAGACACATCCCAAGGAGCAGGTTATAAAGGCATTGGTGCAAATGACAATTgttggcaacagcaacaatggcATGGGCAGTGCTTTGGCGGCGGCCATGCTTGCCACATCTGCTCCAGATAATGCAACCTCACCATCTGCAACcgcatcatcgtcatcatccgCGATCGTTGATGTAAAACCATCCATAAAAACATTGACAACTGGAAAGGGATTGTCATCTCAGCCAGCGGTGGCATCGCCGCCACCGTTATCTTCCTCCATTGCTGCTGGCTctacaaacaaattgaataatcCACCGAATAAGGCAACATTGAAAAGCGCTCCGCCCATGCCCACAAGCACTTTGACTGAGGCATCAGCCAACAAACCATCTGCAcccaccaacaccaccacaATATATCAGCCAACATTGGCCACGGATTATGGCTATGAACAACAAGCGTCTGCTCCTCCTCCctcacagcagcagcagcatggtTTTTCCCGTGGAGCCACTGCCACATTGGTTATACCACAAGTGCCGCAGCAGCATTTCCTGGccaaccagcagcagcaacaacaacaacaacaggcacTGTTTGCTCATCAGCAGACACAACCTGGACTAAAATATACCTATGGAAATACCTCGCTGCCTCCGCCGCCGCCGTTGCAGATCTTttcgcagcaacagcaggcgGCAACGCAGCAAACACAATCACATCAGAAGCCCCCACCCGCTTATGGAGCCGCCATCAGTCAAATTCGATCTCAGCATAACCAAaacaagcagcagcaccacctccaccaacaccaccagcAGCTAAATTTGCACCACAATATAAACCTGGCACCACCGACCAATGGAACTgccaaacagcagcagcagcaagctaCTAATAAAGTTCTAACAGAAGTATTTCTGAATCCCCCACCACctccgccgccgccgccaacaacaacaacactgccaGTTGCGCAGCCACAACATCATCcgcaccatcatcatcaacaacagcagcagcaacaatccGTGATGCCAAGATTGCCAGCTCAGTCATTGATGACCCTTACAACGAGTTGTACTGCATCCACCTCCATTTCATCATCAGGATCATCTTCGGTTCGAGTCAGTCGGCAAACAAATTCACCATTTGGAGCTCTGCTTAATGCGGCTGCTGCAGTTGCCTGCGCCTCATCTTCATCTTCGTCCTCATCCGTGCTACGTTATGCCGAATCACCAGTGGCCCATTATTTGGAGCGGGAAAATGGGGATTTTATTGTTCAAGAGACGCCCAAGCATATTGTAGAGTGTGTGGAGAAGGAAGATGGTGAATTTTCAGTGATTGAACGCATATATCAATCGCCCCCAAGTGTACTTCATTTGCATGAcgaagatgaagatgatgacgatgacgaggATGAAGAAGGCgacaatgaaaatgaagagGATGATGAAGAGCAAGATGAGGATGCAGCAGATGCCTCTGATCATGTTGATCATGATGGGGATGATGAGCGCGAGGAGAATAGTCGTAGTCGAAATCCAAGCAAAACAACGAAAAAGTCACGCAAATCCAAACCGAAAAGAGCTCCCAAGCAACAGGCGCAGCATCAGCAGCGAATTTGCAATGAGGAGGAGTTCATGAGCTTAAGCAGCGGAGCAGAAAGCGAAGTGGAAAACGAAAAGGAGAGACGTGAGCAGAAAATCAAGCAATTGGAGGCATCACAGCAGCCGCCACTTTGCTCGGCACCATCCACAAGCGgagcagcagcgacagcagGATCAGCTGTAGTTACAGGCACGGCAGCAGCTGCTGGCTCAGCGGATGGATCTTCCAGTTCCACTTCCACAAAATCCAAGAAGAATCGTATTACGGTGCTTAGTGATGTGCCTCTTAATATGAACGAATATCTGGATTTAATGGGTAACATTGTGGCCTCCAGTCGCATTGGCCAGGCACGTCCCTTTGCTGCCGTCGCTCCTATACCTCTGGTGAAAGTGGAAAAGGAAGAGCCACTGGATGATGACTATGATAATGAGAGTGTAGCGGAAACAGTTTCATCGATACCGCCAGTGGAGCAAAAGCCCAGTTTGGGCACCACCAGCGTAATCCGTATGGctagcaccaccaccaccagtagtagcagcagcctTACTACTGCCGAAGATCTCACCCAGCCACCGCTTATGAAGATTGAGGTGGAGCCAACAACATTGCTAGCGCCACGCTTCTCGGCACCAGCGCCGACAACTCAGCGTGGTCCCAAGAAGTTAGTGATTAAACCAAAGgccacgacgacgacgacaacaacgaaaaagaCTGACACCCCCATAATaccatcatcgtcatcatcttcCACCAACAGCACCAACTATTCTCCTACTTCTACCAAACAAATCATATCAAATGGAAACGCCGATGGGGCCATTCCTGCTCCCGTCTTCACTGAGATGGTGCAAATCAAAAGCGAGACTCTGGAGGCTCCGTCAACGagcagcaatagcatattGGAGAAGCATCTGACGAAGAGGAAACACTCGACggttaatgatgatgatgctcgTGTCCTGCTCGACTTTGCTAATTCCAAACAGTCGCCCACATTGATTGGTGGAACCACATCCAATACCACATTTGTTGTTAATGCCAACGCCTCTGGTTTTCCCTCGGCTGGATCTGTTTTTGCCAGTAATACGGCGGCAAATCCTAACCAGAGCGTCGGCAAACCGGGCGAGGAATATATATTGCCCGATAATAATCTGGAGGTGGATGAAATTGTGATATCATCGTCGTCTTCCTACGCAGCCTCATCCGTTTCGCAGATCCAGAATCAAGCCCAGATGCAGGCAGCCGCCCACTCTCAGGGTCAGGCAGGTACGGCGGCGGGGTCATCATTTAATGACTTTAACTTCCTGTACCATCAGACGACAACAAACCAGACAGCAGGAGCAACTTCCATGGGTGGTGCCTATTTCACGCCCTTTGCTCGACAGCAGCAACTACAGCAAACTCATCATGGAGCGAGTGAGGCCACCAATGCAGCTACATTGGCCTCATCTTCAAGCAATTCCTCGGCATTGGATCATGATTCAATGAATGCCACTTTCCGTGTAACAAAGACACAATCCTCGCACTCCTGGTACCATCCAGTCCAGCAACAGACATCGGCAACAGTTGGAGCGACAGCAGGCGGAGGAGGTGGCTCATCATCCTCGCACAATCACGATTTGGCGGCCCAGCCAACTAATTTTAATGCTGCATTGGCTGCCGTAGAATGCTGCAGTGTGGCTGTGGATGGTGATGCCAAGGCATATTTGGATCTTGATGCCTGCAAACGAGAACAGTTGAGCAATAGCAGCAATTTACCATCGGTTTCTGCATCgacaacatcatcatcgtttGCCGGTGCTGGCACTGAGAGCAGTCTGGTTGGAGGGCTCAACATTCGCACCGATGAGAAAATGCCCGCCAAGGGTGAAATATCCGAGCAGGAGAGCAATTGCGACATTGAGAACTCTTGGAGTCAGTCGatgTACGGCGACATATCACAGCGCTACTTTAGAAATCAATTCTCTGGTGGCTATAATACCGACTGGCGTCAAGATTATTATCCAGCACAGGATCTCAGCGCTCAGCAGCGGGAACACAAGCGttttgattttaatgCGGTCGACGAAGAGGTTTCCTCTATGTCCAGAAAGAGTTCACCCTTACCCACCGCTTCCACCTCATCGTCATCCTCGGCATTGTTGGCTGGTCCACCAATAGCCTCCACCTCTAGGGCAGCAGCTGAGGCAGCGGCCgaagcagctgcagcagcagcagctgtcgCCGCATTGGCTCAGCGTAAGCCGCCGCCGCGTCGCAAAATCTACAAGTGTCCTCACTGTGAAGCCATCTTTGAGAAGCTGAAAGAGCGGAATGCGCATATGATTGGCGAACACAACTATGTGCGTCAGAATCGTCGTTTGATTTGCACACAGCCGTTAATCAGTTCGTCCAGCATGTTGCCACCTCAGccacagcagcatcagcaacaacaacagcaacaaatgttACTCCAAGCTGGACATGGAATAATGCAAGAAGATTCAAAAGATGGCATTGTTAAGATCAAGCAAGAGCATTGCCAGGACAAGCACGATTCCGAGCAGCAGCTACTGGATCATGCTGAGCTGGCGGACATGAAGGATGCGGAATTGCTTGGACATGTAGCTGTCACAGACGGTGGCGATATTAAACCACCAGGCGTTGGTAGTGCTGGTGATTTAGATGAAAAGCCAGCCATGCCACCTCTGGCAATGACCACTCCCGCTGCCAAGTTGGCCGCCCTATACCGAATGCTAATGGCCTACAACGAATCCAAACTTGGCCAAGAGCGCAACAGCATTAGCGAACTGGAACAGAAAGCCATGGAGAAATCTATATTTCTGTGCTATGTGTGTCGCACTGATTTCCCATCCGTCAAACTGTACGATGCACATCTCACAGAGCATCCAGCCGAATGTTTCACCTGTGGCAAGAAATTCTATCGCTGGAAGAACTTTTCACTCCATCTAAAACGTCACTTGGGCTGGAAGGAGTTTGGCTGTTGTGTGTGCGACAAGAAGTTTGTGGTGCGTAGTGCCCTTGTGGAGCATATGCGCATGCATACTGGCCAGACACCGCTCAAGTGCAAGATTTGCGGTAAAAAGTTTAAGCGCTATTCCAATTTGACGCAGCATCGCAAGCGACACACAAAAATGATGGTACGAAAGAAGGAATATGTATGCCATTGCGGTGAGGTATTGCCTTCAAAGGCACGGTTTCTTTGGCACAAGGAGACGCACGATCTGAAGCCCAAATGTTGTCCGTATTGTTGTGATCGCTTCGTTCATGCCAATTCCCTGCGTCGCCATATACGTTTGGCCCATTCGGATAAATTCGATTATGCCGAACCCATGGAATGCCCAATGTGCAAACAGATCTTTGCCAAGACCTCCATTAAGGCACACATGGCCACACATTCGACAGATCCGCAATACGATTGCGCCATCTGTAATAAGAGCTTCTCAACCAAATGGAATCTTAAAATCCATTCCTGGGTGCATGCCAATCGCACTGCCAAGCCCTTTAAGTGCGAGTACTGCCCAAAGGCGTTTGTGCGTGAACTAGACTTTAAGAATCACATCAATGCCCACAAGCAGATCAAGCCGTATACGTGCGAGTATTGTGGGTGCAAGTTTATACGGAAATACAATTATATGCGGCATCGGCGCGAACATCATGGCAACAAGATGTTTACCTGTGATCAGTGCGACAAGTCCTTCCATCGACACTACTATCTGATCGAGCATCGTCGAATTCATACTGGAGAACGACCCTTTCATTGCACAATCTGCGGCAAAAGCTccacaacaaaaaccaatcaCAACAAGCATCTGAAGATCCATCACTCACGCGATCCATTCACCGTGGAAGTTTAG
Protein Sequence: MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNSNNGMGSALAAAMLATSAPDNATSPSATASSSSSAIVDVKPSIKTLTTGKGLSSQPAVASPPPLSSSIAAGSTNKLNNPPNKATLKSAPPMPTSTLTEASANKPSAPTNTTTIYQPTLATDYGYEQQASAPPPSQQQQHGFSRGATATLVIPQVPQQHFLANQQQQQQQQQALFAHQQTQPGLKYTYGNTSLPPPPPLQIFSQQQQAATQQTQSHQKPPPAYGAAISQIRSQHNQNKQQHHLHQHHQQLNLHHNINLAPPTNGTAKQQQQQATNKVLTEVFLNPPPPPPPPPTTTTLPVAQPQHHPHHHHQQQQQQQSVMPRLPAQSLMTLTTSCTASTSISSSGSSSVRVSRQTNSPFGALLNAAAAVACASSSSSSSSVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHLHDEDEDDDDDEDEEGDNENEEDDEEQDEDAADASDHVDHDGDDEREENSRSRNPSKTTKKSRKSKPKRAPKQQAQHQQRICNEEEFMSLSSGAESEVENEKERREQKIKQLEASQQPPLCSAPSTSGAAATAGSAVVTGTAAAAGSADGSSSSTSTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGQARPFAAVAPIPLVKVEKEEPLDDDYDNESVAETVSSIPPVEQKPSLGTTSVIRMASTTTTSSSSSLTTAEDLTQPPLMKIEVEPTTLLAPRFSAPAPTTQRGPKKLVIKPKATTTTTTTKKTDTPIIPSSSSSSTNSTNYSPTSTKQIISNGNADGAIPAPVFTEMVQIKSETLEAPSTSSNSILEKHLTKRKHSTVNDDDARVLLDFANSKQSPTLIGGTTSNTTFVVNANASGFPSAGSVFASNTAANPNQSVGKPGEEYILPDNNLEVDEIVISSSSSYAASSVSQIQNQAQMQAAAHSQGQAGTAAGSSFNDFNFLYHQTTTNQTAGATSMGGAYFTPFARQQQLQQTHHGASEATNAATLASSSSNSSALDHDSMNATFRVTKTQSSHSWYHPVQQQTSATVGATAGGGGGSSSSHNHDLAAQPTNFNAALAAVECCSVAVDGDAKAYLDLDACKREQLSNSSNLPSVSASTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFSGGYNTDWRQDYYPAQDLSAQQREHKRFDFNAVDEEVSSMSRKSSPLPTASTSSSSSALLAGPPIASTSRAAAEAAAEAAAAAAAVAALAQRKPPPRRKIYKCPHCEAIFEKLKERNAHMIGEHNYVRQNRRLICTQPLISSSSMLPPQPQQHQQQQQQQMLLQAGHGIMQEDSKDGIVKIKQEHCQDKHDSEQQLLDHAELADMKDAELLGHVAVTDGGDIKPPGVGSAGDLDEKPAMPPLAMTTPAAKLAALYRMLMAYNESKLGQERNSISELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCCVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKMFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00556098;
90% Identity: iTF_00591181; iTF_00578005;
80% Identity: -