Dpro020124.1
Basic Information
- Insect
- Drosophila prosaltans
- Gene Symbol
- -
- Assembly
- GCA_018151275.1
- Location
- JAECWY010002308.1:1411442-1414593[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 4.1e-05 0.0036 17.9 7.5 1 23 201 224 201 224 0.97 2 16 0.001 0.089 13.5 1.6 1 23 253 276 253 276 0.95 3 16 0.002 0.18 12.5 3.3 1 23 326 349 326 349 0.96 4 16 0.0057 0.49 11.2 1.8 2 23 402 423 401 423 0.97 5 16 0.84 73 4.3 1.5 1 20 541 560 541 562 0.81 6 16 0.014 1.2 9.9 1.3 1 23 571 593 571 593 0.94 7 16 0.0001 0.0087 16.7 1.1 1 23 600 623 600 623 0.96 8 16 0.00021 0.018 15.7 0.9 2 23 632 653 631 653 0.96 9 16 0.00021 0.018 15.6 0.1 2 22 680 700 679 703 0.90 10 16 0.11 9.2 7.1 0.8 1 23 739 762 739 762 0.96 11 16 4.3 3.8e+02 2.1 0.3 3 22 771 790 770 790 0.92 12 16 0.0065 0.57 11.0 2.0 1 23 799 822 799 822 0.96 13 16 1.5e-05 0.0013 19.3 0.5 1 23 849 872 849 872 0.97 14 16 0.21 18 6.2 0.2 1 23 882 904 882 904 0.93 15 16 5.9e-05 0.0052 17.4 3.7 1 23 910 932 910 932 0.99 16 16 6.1e-06 0.00053 20.5 3.2 1 23 938 960 938 960 0.98
Sequence Information
- Coding Sequence
- ATGACAAGAACCTGCCGAATTTGCGCTGGAGATGGGGGCCGATTTTGGATCGAGACGCCTGTGGAGAAGTTTGCTGGGAAAACGTTCAATCAATTGCTTCTAGATCTGACCAAAATCGAAGTAACCATGGCCCAGATGGAAAAGCTAACGCCCTGGATATGCCGCAACTGTGCGCATAAACTGCAGCATGCCTATGACTTTGTTTTAAAAGCCAAAAGGACGCACGACATTTTGGTAGCTAGAATGGAGGAGTCACAGGATGTGGCCAAATTAACTGAGGTACTTGAAGAGGAAGATCCATTCTGCCTACGTGAGACTCCTATACAGTTGATGGAGATTGAGGGAGTGACTATTAAAATGGAAGACTCCGAGCCAGATGCTGTTAATGCTGATGGTGATAAAGGGCCGCCTTATGCAGTACCTGATCCTCTAGTGCGTGCAGGCATTGAAAAGCGTGACATTTCAGGCTTAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCGGTCTTTCAGGGCCAATTCTATAGCTGTTGCCAAATTGAAGAAACATAAATGTAATCACTGCAATAAAGCATTTAGATACAACACTAATTTGTACAGGCACAAGCAAACAGAGCACAATTCCATAGAGCAGATTAAAAAAAATGTCAAGAAACTATTAAGAAACCGCAAGGATGTAGATGAGAAGGATGATGATAACTACTATAAGTGCGACCAGTGTGACAAATCCTTCAAGTTTGTCATGTTACTGGTGGAGCACAAACAAAATTTCCATGGAGTCAATCAAATGCCTTCTAGCCGAGGAGGAGCAGCTGCATCGCCTCAGCCGCGACCCAAACTGAACACAGATTCTCTGGTTCATAGCCTTATTAAGGCTGTAGAAATTTCGGATGAGGATAGCAATTCGAGTTCGGATAACTACTATAAATGTGATCAGTGTGAGAAGTCCTATAAATATATTGTTAGTCTAATTAAGCACAAGCACAAGGATCATTATGAGAACTCCAAAAATTTCGCTGATGACGAAGATCAAGCCCAAGCGTCCACTTCAAACTCCAGTGGATACATTGCCTCAAAGCCCTCCCGTATCAATCGTCGGGTTCAGGACTTTGACTTACATCGTTGTCAACCGAATGGGTCCAAGGAGATCAAATGCATGATCTGCTTACGACGATTTGTCAAACTGGGCGAACTGCGCCAGCATCTTAAACATCATCCAGTTGATTTTGATTTCGAGTCACATGGCGAGCCAATCGAACGAATAGCCGAGGGTTTCTTTAAAACGGCTGTCGAATCCACAAAAGAGGGTTTAAAACGTCGCATTTTTAAGGATCTTGAAGTAGGACTGTATGGACGTTACTACTCTATTACAAATGAAGCCCACTACGAGATGAGTCTGGATAGCTCCGATACGGATAGCGATGGCGGCGATGCCGATGCTCAAGTGATTATGCGGCGTAGCTATGCATGTGAATTGTGTGACTCCCCAAAACAACCGGCCAAGTGGCCTCGGAAATATCAACTGCACGAGCATCACAGGCAACATCATTCCTGGTTAGAAGCGCCCTATGTTTGTCATCGTTGCGATTCGCGCTTTCTCAACGAGCAACTTCTAGAGCATCACACCAGCCAGCTGTGCAATAACACTCTAAAACGTTTCCAGTGCGACAAATGTCCGCAGCGTTTCTTTTGGCGCAAAAACTTGAGGTCACATTTGGTGGATCATAAAGATAAGCAAGATAATTATCCGTGCGATCAATGCCAGCGTAGTTTCCAGGATAAAAGTTCCGTAACTAGACACAAATTAATGATGCATGCAGATGGGAAGAGCCAGTTGATACCCTGCCGTTGGTGTACTAGGGTCTTCTATCGGCCGGCACTGCTGCATAAGCATCTACAGCGACATGGATTTAGTGGTGAAGATTTACCCTTGGCTGAGACATTGCTGGCCGATGCAGCCAAACCTTTGGGACCAAAGAATATTCAATGCAAACTTTGTGACCTTCGATTCGTTAGTATTGCGGATCTAAAACGTCACATGGCTATGCAGGGACACGCCGCTCAGGCTACTACTTATATGATCAGCACTGAAGCTGGATTTGAACTCCAGCTGGATGATACAGACGATAGCGATGACGACGACGGGCATACAAAGAGATCCTACACATGTGATCTCTGCAAGATGAAACTTCCACGCAGGCGTGAGATGAGTGAGCATCAGTACTCGTTACATACATTTGATAAACTGCCGCACGGATGCGATCAGTGCATATATAAAACTGTGGATAAAATCATGCTTAAACATCATCAAATGACCCAATGCCAAAACAAGGATAAAAAATTTACATGCTCCCATTGTGGTTACAGGTTTATGTGGCAAGAAAACCTCGATCAGCACTTGTCTAGTCAGCATCCCAAACATAAAACTAACATAAGCATTCAGGATCAACAGTCACAGAGTTCTTCCATTCGTCGAAAAAGACGCTTTAGATACCAATGCCCCCATTGTTGGCGCTCTTTTGTTGTTCAACCCAGTTTGGATAAGCACATCAGGGACATGCATGTGGCTAAGAAGAATCCTGGAAAGAAATATCTCTGTTCATTGTGCGGTCTGGAATCCCTTACTCCCAATAAGCTCAGCATTCATATCCGCCGCCATATGGGGGAAAAACCCTTTAAATGCGATCTATGCGACATGCGTTTTACTGTTCATTACGAACTAAAAGTGCATCGGCGAAAGCACACAGGCGAACGACCATATCAGTGTACGTTCTGTGACAAACATTTTGCCCGGCCCGATAAACTGAGACGTCATGTCTATATGCATAGCGACAAGCGTTAG
- Protein Sequence
- MTRTCRICAGDGGRFWIETPVEKFAGKTFNQLLLDLTKIEVTMAQMEKLTPWICRNCAHKLQHAYDFVLKAKRTHDILVARMEESQDVAKLTEVLEEEDPFCLRETPIQLMEIEGVTIKMEDSEPDAVNADGDKGPPYAVPDPLVRAGIEKRDISGLSXXXXXXXXXXXXXXXXXXXXXXXXXXQRSFRANSIAVAKLKKHKCNHCNKAFRYNTNLYRHKQTEHNSIEQIKKNVKKLLRNRKDVDEKDDDNYYKCDQCDKSFKFVMLLVEHKQNFHGVNQMPSSRGGAAASPQPRPKLNTDSLVHSLIKAVEISDEDSNSSSDNYYKCDQCEKSYKYIVSLIKHKHKDHYENSKNFADDEDQAQASTSNSSGYIASKPSRINRRVQDFDLHRCQPNGSKEIKCMICLRRFVKLGELRQHLKHHPVDFDFESHGEPIERIAEGFFKTAVESTKEGLKRRIFKDLEVGLYGRYYSITNEAHYEMSLDSSDTDSDGGDADAQVIMRRSYACELCDSPKQPAKWPRKYQLHEHHRQHHSWLEAPYVCHRCDSRFLNEQLLEHHTSQLCNNTLKRFQCDKCPQRFFWRKNLRSHLVDHKDKQDNYPCDQCQRSFQDKSSVTRHKLMMHADGKSQLIPCRWCTRVFYRPALLHKHLQRHGFSGEDLPLAETLLADAAKPLGPKNIQCKLCDLRFVSIADLKRHMAMQGHAAQATTYMISTEAGFELQLDDTDDSDDDDGHTKRSYTCDLCKMKLPRRREMSEHQYSLHTFDKLPHGCDQCIYKTVDKIMLKHHQMTQCQNKDKKFTCSHCGYRFMWQENLDQHLSSQHPKHKTNISIQDQQSQSSSIRRKRRFRYQCPHCWRSFVVQPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLTPNKLSIHIRRHMGEKPFKCDLCDMRFTVHYELKVHRRKHTGERPYQCTFCDKHFARPDKLRRHVYMHSDKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600495;
- 90% Identity
- iTF_00501246;
- 80% Identity
- -