Basic Information

Insect: Drosophila phalerata
Gene Symbol: -
Assembly: GCA_951394115.2
Location: OX596004.2:29216011-29217618[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.5e-16 3.3e-13 49.6 0.0 2 45 366 409 365 409 0.95

2 3 0.038 83 3.6 0.0 27 37 438 448 435 453 0.89

3 3 1.5e-20 3.3e-17 62.4 0.0 2 42 475 515 474 517 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.5e-16	3.3e-13	49.6	2	45	366	409	365	409	0.95
2	3	0.038	83	3.6	27	37	438	448	435	453	0.89
3	3	1.5e-20	3.3e-17	62.4	2	42	475	515	474	517	0.96

Sequence Information

Coding Sequence: ATGGGTCACTCGTCCACAATTATGGATATCCAGCGCGTTCTCCTCAACCAGCAGAGCAGCAACGAAAGCTGCGAGGTTTTGCTGGTGGCCAAAGATGGTATCAGTGTCCGAGCACATCTCTTCGTGCTCAGCACGTGCAGTGATCTAATGCGTAATCTGCTCGTCGATTTACCAGTCGGCCAGGAGGCAACCGTTATCCTGCCCGACATTCGCGGGGAGCTGCTGGAGAGCATGTTATCGTTTATTTACATGGGAGAGACCAGCTTATCATCTGCCCTGCTAACCGAGTTTCTCGAAGCGATCAATCTCTTGGGCATCAAATCGGCCATTAGCTTTGAGACGAATCCCACAGCGATGAGCACCACAAATGTGGTGAGTGGAGCAATGGCTGTGGAGGCAGCCAAGTCCATTACTGGCTTGCACATTGCGAATACAGCACTtatggaggaggaggaggaagaggatGGCAATGTGGTTGTCGGCAAACTGGAAGTGGGCAACTCTGTGCTCACTGACCATCCGCATCCGCAACAGAGCCAGCAGCAGGATGCCAGATCCTTGGAATTCCTCGATGTGTACACGGATCAGCCAAAGATAACATATTCCATTGAACACATGGGTGGCACCTCGAGTGGCAATCAGTACATATTAACGGAGAACACGGGCACATTCACCATCACACAATCCGCATCCTCAGTGGCGAAATTGGGAGGCACTGTTGTTGACCATGTCACCGGTAGTGAGTTGGCGGTGGATGATGGGGACGCTGATGTTATTGACGATCATGAGGAATCCGAGTCACATTTAATTGAAGAGGACTATGTTCCAACTGCTGGTCCCTTGATAGAGATGGGTGcagatgcggatgcggatgttGATATGACTGAGGATGTAATGCACGAGGAAGATGCCGgtgaagaggaggaggaggaggaggaattACTGGATGTGAAGCCACGCAAATCGCAGCTAGACATGAAAATCTTGAGGGCAAAGGTGCAGCCACGTTCGACGACCTCGAAGGCATCCAAAAAGACAATGACCAAACAGCATCAACAATATGCGGAACTCAAGAAGGAGATCAAGGACGACATCAATGATGCCCTCGATCTGGCAGCAGACGCAGTGCTTCACGAGGGTCTCAGCCTGCAAAAGGCTGCTGATCGTTACGACATATCGAAGACCGTATTGTGGCGACGTGTCCGTTCCAATCCTGCCTACATGAGAATCAAACGCGAGAAGCCCTCACTTTCGGAGGCGTATGAGCGTCTGAAGAACGGTGACTCCTTGAAGAGCATTAGTCAAGATCTGAGCATACCCATGTCCACATTGCACAGACACAAGGTGCGTCTGGCGGCTCAGGGTCGTTTGCCCGAATTCGTTGCCTGTCGGCGACGGGACAGCACTCCCAAGGACGAGCTGCGGGACAAGCTGGCCAAGGCGGTACATGCCTGTGTCAATGGCGGCATGTCCCAGAATCATGCGGCGAATCTCTTCGAAATACCCAAGAGCACACTCTGGCGACATCTGCAGCGTCGGGTCACGGAGGCGGAGCGTAAGGTcaaggaggagcaggaggaggaggatgaggaAGACGCTCTCAACTAG
Protein Sequence: MGHSSTIMDIQRVLLNQQSSNESCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLVDLPVGQEATVILPDIRGELLESMLSFIYMGETSLSSALLTEFLEAINLLGIKSAISFETNPTAMSTTNVVSGAMAVEAAKSITGLHIANTALMEEEEEEDGNVVVGKLEVGNSVLTDHPHPQQSQQQDARSLEFLDVYTDQPKITYSIEHMGGTSSGNQYILTENTGTFTITQSASSVAKLGGTVVDHVTGSELAVDDGDADVIDDHEESESHLIEEDYVPTAGPLIEMGADADADVDMTEDVMHEEDAGEEEEEEEELLDVKPRKSQLDMKILRAKVQPRSTTSKASKKTMTKQHQQYAELKKEIKDDINDALDLAADAVLHEGLSLQKAADRYDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKNGDSLKSISQDLSIPMSTLHRHKVRLAAQGRLPEFVACRRRDSTPKDELRDKLAKAVHACVNGGMSQNHAANLFEIPKSTLWRHLQRRVTEAERKVKEEQEEEDEEDALN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00549654;
90% Identity: iTF_00510457;
80% Identity: iTF_00575702;