Basic Information

Insect: Drosophila persimilis
Gene Symbol: -
Assembly: GCA_003286085.2
Location: NW:17853142-17860650[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00068 0.038 14.1 1.5 1 23 143 165 143 165 0.97

2 15 4 2.2e+02 2.3 0.8 1 23 171 194 171 194 0.89

3 15 4.2e-05 0.0023 17.9 0.5 1 23 379 401 379 401 0.98

4 15 1.4 81 3.6 4.4 1 23 407 430 407 430 0.94

5 15 0.054 3 8.1 0.5 1 23 445 468 445 468 0.94

6 15 0.0042 0.24 11.6 2.1 5 23 779 797 776 797 0.92

7 15 0.048 2.7 8.3 1.4 1 23 803 826 803 826 0.98

8 15 6.7 3.7e+02 1.6 1.3 2 19 866 884 862 886 0.56

9 15 0.00094 0.053 13.7 0.7 1 23 906 929 906 929 0.97

10 15 0.0036 0.2 11.8 0.6 1 23 1183 1206 1183 1206 0.92

11 15 0.016 0.88 9.8 2.2 1 23 1218 1240 1218 1240 0.96

12 15 0.00014 0.008 16.3 2.4 1 23 1245 1268 1245 1268 0.95

13 15 0.002 0.12 12.6 3.8 1 23 1274 1299 1274 1299 0.95

14 15 0.004 0.22 11.7 4.1 1 23 1304 1326 1304 1326 0.97

15 15 0.0011 0.06 13.5 0.8 1 23 1332 1355 1332 1356 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00068	0.038	14.1	1.5	1	23	143	165	143	165	0.97
2	15	4	2.2e+02	2.3	0.8	1	23	171	194	171	194	0.89
3	15	4.2e-05	0.0023	17.9	0.5	1	23	379	401	379	401	0.98
4	15	1.4	81	3.6	4.4	1	23	407	430	407	430	0.94
5	15	0.054	3	8.1	0.5	1	23	445	468	445	468	0.94
6	15	0.0042	0.24	11.6	2.1	5	23	779	797	776	797	0.92
7	15	0.048	2.7	8.3	1.4	1	23	803	826	803	826	0.98
8	15	6.7	3.7e+02	1.6	1.3	2	19	866	884	862	886	0.56
9	15	0.00094	0.053	13.7	0.7	1	23	906	929	906	929	0.97
10	15	0.0036	0.2	11.8	0.6	1	23	1183	1206	1183	1206	0.92
11	15	0.016	0.88	9.8	2.2	1	23	1218	1240	1218	1240	0.96
12	15	0.00014	0.008	16.3	2.4	1	23	1245	1268	1245	1268	0.95
13	15	0.002	0.12	12.6	3.8	1	23	1274	1299	1274	1299	0.95
14	15	0.004	0.22	11.7	4.1	1	23	1304	1326	1304	1326	0.97
15	15	0.0011	0.06	13.5	0.8	1	23	1332	1355	1332	1356	0.95

Sequence Information

Coding Sequence: ATGGCATCTAACAATAGGTTGAAAACGGGCTCAGGATCATCCCAAATAAACTACAAGTTTACATGTCGCTGCTGTCTGAAATCCGATGCGGAGTTCCTCAAGCTGGACACGCTGGCGGTGGCGCGCAATCTGGATCCAAGTGAATCCGATAAAATACCCCTAATTCGTTGTTTGCTGTTCTGCATACGCACGGAAAATTTGCCGGAGCTTCCGCAATACATATGCGTTGAATGCAGCAAGAGCTTGCAAATAGCCTACTATTTCTTGCAAAATGCACTGCGCGCACACGAAATACTCTGCCGCAAACTGTGTCCGGGCAAGCCGCGTCCTACGCTGGCCCAGCGTTTCAATGGCTCCATCAAACAGCCAGAGGTGTCGCTGCGGCAGGCGGTTGAGGACAAGGCGAAGCCACATAAGACATTTCGGCACGAGTGCAAACTCTGCGGCTTTGTCGTCTACAATCGGATGGAGCTAAAGCAGCACATACGTCAGCACGTCGATGGGAGCTCCTACAGCTGCAAAGTCTGTAGCTTCGTAACCCTGAAGCAGCGTCTCCTGCAGGAGCACTACAGTGCGACCCATGGCATGTCTGCCAACCACGCGGACGAACAAGTAAAACCAAAATCATTCTACAATGCCGCTGCATCCACTTCATCCACATCCGCTACGGCTGCCAAAGAGGAGGTTAAAGTGTGCACCCTGGAGGACATGGAGCTGTTGATTCCCACGGTTCTCGCGCCCGGGGATTACATCCAACCGTCCATCGATGAAGAGCAACTGCGTGACATAGAACAGCAATTGGCGGCCAGCATGTCGGAGCCCGTTGTCGGTGTCGACACTTTGACCTCCAACATGTCACAAATAGAGGGAAACAATATGAGCATTGGCACCGAGTATGTCGTGATGCCCGATGGTACCTTGCAGATCAACGGAGGCGGCGTGGTCATTGAATACATAGATGATAGCAGGCCACATCACAACGCCACTGGAAATGTAAGCCTGCAAAATCTCCTTGGAGGCGGCAACGAAAACGAGTCCATGGACATCGATGTCAGTGAGCTGATTGTGGAGGATATGGTGCCGCAGATAAAAGTCAAGCCAAAACCAATACCCATTGGACCCGCTCCCCTCAAGTACAAATGCAAAGTCTGTCCCAAAGCTTTTGTCACCATGGGGCGTCTAAAATCACACCAGATAAGCCACAGCCATTTGCCCAAGTTCTACTGCGATCAGTGCCCCTTCTACTCGCTGCGCTCTAGCGATCTCTGCCAGCACTACAAGACAAAGCATCTCAAGGACGAACAGAATGGAAAGGTGGCCGGTGATGAGATCTATTCCTGCGACACGTGCCTTTTCGAAGCGAGGACATCCAGCCAGCTGCGGGTGCACATAACTGAAAAGCATAAGACACAACCCTCGGATATAGATCTGCGCCCCACTTGGCAAAGTGGGGCGACCGCCTCCGGTGGCGGCATCAGCTCGGCTCGAACTAGTGGCCAGGGCTCCAAGGAGCAGGGCAGTCAGCCACAACACACCGAAATTCCACTGGGCATTCAATATCCGTCTGCAGTGCTGACGGCGGCGACAGTTGAAAATCAGCCAttgcatcagcagcagcaacagcagccggaGCCACAGCATCAAGAGCAGCAggatcagcagcaacagcaacagcaacttgCAGCGATACCATCCCAAACATCCACGTTAACGCAGTCGGGTGATATCAATGTGGTGATAGATGCCACACCGCTGTTCTTTACGGCGCCAGCGGCAGGGACTGGCACTGTGACTGTGTCTGGGGAAGAATTAGAGGGTCAGGGACAGGGAGCGGGAGATCCGGGTACAATATCCGCTGAAGCAATGGCCAATGGGGACGGCTTGCACATCGGCAACACATATGAAATCTTTCCAGAAATCTCAACGAGCAGTTTGGCAGCGACTCATCCCATACCGGCATTGCCAACGACAACGTCGGCGAACATCTCAATGTTCGGGGATATGCAGGATTTTATAGACAACACAGATGTGGCCGCCATATGCACCATACCCGCCGATGATATGCCAGTGGTGGATGGTGACGATATTGTGATTGATAATAACAATATCAGCTTGGACTTTGATGCTGAGAACCTGTTTGAGGACTTTGAGGATGAGGAAGAGGCCGTtggcgatgaggaggaggacgaaGACGACGAAGACGCTGAAAATGAGGATGAAAATGAGAACAATGATGCAGCCACCGATCAAAATCTGCTGCTAACAagcgacgatgacgatgtggATGACTTTGACGACGAGCAGTCCAAGCATCTGCAAAAACCATACTGCATATTTTGCAACAAAAAGTTTACGAGCCAATACAAGTTCGAGAATCACATGTTTGTGCATCGAGGTCTAGCCCCCTACCGCTGTGAGCTCTGCACCAATCTCTACAACATGAAGCGTCTCCTTATCAGGCACTACAAAACCGTACACAGGCGCATGCCCACGCGGGACATGGTTCAGGCGAAGGGCGACAAGGTATTGGTGGCGCGCACCAATATCGAGACACTGCAACTGGATCTGGATAGGAAGCCCATGCTGATGTGTGCCAAGTGTCCGTTTGAGTGCGAATTGGATACGGAAATGCGAAAGCATCTGAATGCGCATCACGGCATCAATGATGGTGTATCCGTGCATGCCAACGAGGTGTTTATTATACGCAAACTACCCTTTGAGTGTCCGCGATGCATTCGCTCATTTGCGGCCAAGAGCACACTGACCCGCCATCTACAGCGTAGCCATTTGGTGGACACGATAATTGAGATGCAATCCAACCAAACAACCACGAACtcggcagccacagccacaagtACCACGTGCACTGCAACCACCTCATTGCCGGCGAACACGGCTGACGAGCAGCAGCTCGAGACCGATCGGCCGGCCACGTCGGAAACGGAGGCTGTTGGCTATGGCGATGGGGAATGCGAGGTAGCAGTCAAACCTGAAGGCGCAACGACAACAGCAGCCGGAGTTAAAGAAGAGCCAACGACTACTTCAACCGcgtccgcatccgcatccgaaACATCATCCATAATATCAACCATAAAAGCAGATCCACCATCAGAAAGAATTCCGAATCCCCCCGACGAATCGTCAGAGCCACGAGCCATGAACGATATAGATTATGTTCCAGTCAAAGGCGAGACAGCATCAGCAGAAGTAAAAGCATCACCACATACCGCCACAATAGAGTCATCGTCATCCACACCAACGCCATTTGATTTTGACTTTGACTTTATGGGGGATGCAGAAAAATCCAGGCTTACGCCTACGCCCACCACGCCCAGTTCGAGCAACAAAGAAATCGTCAGCACCACAGATCAGTTCCCCTGCACCACCAATCCGAGCACGAGCATTAGCACCAGCATtagcaccagcaccaacaccaatGCCTTTGCACCGAGCCTCCTAATCAACGGCAGCGACAAACTGTTGACTGTTGCAATGGAGCCATCGCCCATTAAGGGCCTACGTCCGCGCATCCCTCGCACGCCCACCTACGCGTGCAAGCAGTGCAAAAAAAGCTTTGATGAGCTGGGAAAGCTGGTAAAGCATGAGATGGATACGCATCCCATTGGCGAATCGTCACGCTTGGGCTATAAGCACATATGTGGCACCTGCGGTACAACGTATCGCACAATGGCGCTGCTCAAGTTCCACATGAAGCGGCATTTGACCCGAAAGTTTACGTGCAAGTTGTGTTCAAAGGAGTTTGTACACAAAACTGAACTGGACAGGCACATGCTGGCGAAACATGCCACCGAGAAGTCGTTCCGATGTTCTCTGGATGGCTGTCGCAAGATGTTCGCCTTCAAGCATCATTTGGTGCGGCATCAGAATGCATCCCATCTGAAGTTACGCCACGTGTGCGCCATATGCCAGAAAGAGGTGAAGACCAGCCTGCACCTGAGGCACCACATGACCGTGCACAGAGGCATGACAGCCTACAAGTGTCCCAAATGTGACCGCACATATTTACGTCGCGGAGCCCTTCGTGTCCATGCCCTGTCCGTCCATCATGTGCAGCTTACGGAGACAGAGCTGGCCGAAGTCTTTCGCCACAATGTGGGTTATACCAATCCGCACGACATGAAGGTATTCACACGCAATGGGCAATTGGTGCGCCGCAAGGAGCTGGAAgccgaaaaggaaaaggaaatgCAGATGGGTGATGATTCATCCGCTGTAGTGGcgaatatttcaaaataa
Protein Sequence: MASNNRLKTGSGSSQINYKFTCRCCLKSDAEFLKLDTLAVARNLDPSESDKIPLIRCLLFCIRTENLPELPQYICVECSKSLQIAYYFLQNALRAHEILCRKLCPGKPRPTLAQRFNGSIKQPEVSLRQAVEDKAKPHKTFRHECKLCGFVVYNRMELKQHIRQHVDGSSYSCKVCSFVTLKQRLLQEHYSATHGMSANHADEQVKPKSFYNAAASTSSTSATAAKEEVKVCTLEDMELLIPTVLAPGDYIQPSIDEEQLRDIEQQLAASMSEPVVGVDTLTSNMSQIEGNNMSIGTEYVVMPDGTLQINGGGVVIEYIDDSRPHHNATGNVSLQNLLGGGNENESMDIDVSELIVEDMVPQIKVKPKPIPIGPAPLKYKCKVCPKAFVTMGRLKSHQISHSHLPKFYCDQCPFYSLRSSDLCQHYKTKHLKDEQNGKVAGDEIYSCDTCLFEARTSSQLRVHITEKHKTQPSDIDLRPTWQSGATASGGGISSARTSGQGSKEQGSQPQHTEIPLGIQYPSAVLTAATVENQPLHQQQQQQPEPQHQEQQDQQQQQQQLAAIPSQTSTLTQSGDINVVIDATPLFFTAPAAGTGTVTVSGEELEGQGQGAGDPGTISAEAMANGDGLHIGNTYEIFPEISTSSLAATHPIPALPTTTSANISMFGDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNISLDFDAENLFEDFEDEEEAVGDEEEDEDDEDAENEDENENNDAATDQNLLLTSDDDDVDDFDDEQSKHLQKPYCIFCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHRRMPTRDMVQAKGDKVLVARTNIETLQLDLDRKPMLMCAKCPFECELDTEMRKHLNAHHGINDGVSVHANEVFIIRKLPFECPRCIRSFAAKSTLTRHLQRSHLVDTIIEMQSNQTTTNSAATATSTTCTATTSLPANTADEQQLETDRPATSETEAVGYGDGECEVAVKPEGATTTAAGVKEEPTTTSTASASASETSSIISTIKADPPSERIPNPPDESSEPRAMNDIDYVPVKGETASAEVKASPHTATIESSSSTPTPFDFDFDFMGDAEKSRLTPTPTTPSSSNKEIVSTTDQFPCTTNPSTSISTSISTSTNTNAFAPSLLINGSDKLLTVAMEPSPIKGLRPRIPRTPTYACKQCKKSFDELGKLVKHEMDTHPIGESSRLGYKHICGTCGTTYRTMALLKFHMKRHLTRKFTCKLCSKEFVHKTELDRHMLAKHATEKSFRCSLDGCRKMFAFKHHLVRHQNASHLKLRHVCAICQKEVKTSLHLRHHMTVHRGMTAYKCPKCDRTYLRRGALRVHALSVHHVQLTETELAEVFRHNVGYTNPHDMKVFTRNGQLVRRKELEAEKEKEMQMGDDSSAVVANISK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00536292; iTF_00581024; iTF_00481093; iTF_00474052; iTF_00484653; iTF_00471894; iTF_00517981;
90% Identity: iTF_00536292; iTF_00581024;
80% Identity: -