Zqui000350.1
Basic Information
- Insect
- Zygothrica quintamaculata
- Gene Symbol
- bab2
- Assembly
- GCA_037044455.1
- Location
- JBAMBS010000107.1:558492-561796[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-18 1.4e-14 53.8 0.0 1 43 73 116 73 118 0.95 2 2 7.8 1.7e+04 -4.1 0.4 6 14 476 484 476 487 0.82
Sequence Information
- Coding Sequence
- ATGCCTGGAAGTGGGCGGCACTGGGCTGGCTGGTCAGTGGCGAAACTGATTGAGACCGGCGGACATGCCTGGATGGGTGCTCCTGGAGCAGGCACATCTGTGGCAGATAGCTACCAATATCAATTGCAATCCATGTGGCAGAAGTGCTGGAACACGAACCAACAGAATCTGGTGCAACAGTTGCGGTTCCGTGAGCGCGGACCACTTAAGTCGTGGCGCCCGGAAGCCATGGCCGAGGCCATATTTAGTGTCCTCAAGGAAGGACTGTCGCTCTCACAGGCTGCTCGTAAATATGATATACCCTATCCAACGTTTGTGCTCTATGCAAATCGAGTGCACAATATGCTGGGACCCTCACTTGATGGCGGCACGGATCCTCGACCCAAGGCACGTGGTCGTCCCCAGCGCATACTACTTGGCATGTGGCCGGATGAGCTTATTCGCAGTGTCATCAAGGCTGTGGTGTTTCGTGACTATCGTGAGATCAAAGAAGATATCACAGTCCATCCCTATGTCAATGGACAGGCGCATGGCGCTCATTATGGTTCAGGTAACGCAGCTGCTGTCAATGGTTACCACAGCGCCGTGAAAATGGCGGCACAGAATGCCGCAATGGTACCGCCTGATGCGGACAACACGCTCAGCTCCATGACGGAGAACCTGCGCCGCCAGATACTCtcccagcagcaacagcaccagcaacagtcGCCTCACATGCAGTCCATGAATATGTATAAGTCTCCGGCGTATCTACAACGCTCCGAGATTGAGGATCAGGTTTCGGCCGCAGCGGCAGTGGCTGCGGCCAAGCATCATCATAGTGATAGACGTGGTTCCGAGAACTTGCCAGACTTGAGCGCTCTAGGACTGATAGGCTTACCCGGCTTGAACGTAATGCCCAGCCAGCCGTCATCGCATCAACGTGCCTCTGGTGGCAACGGTGCTGGTCCAGGTGGTCCCATGCACCCCGGTGCTGCCAACTATGCACGTGAGATGTCCCGTGAACgggaaagggagagagagcgagagcgtgAGATGAATCGGGATCGAGAGTTAAAGGAGGCAATGCATGCACGCCAATATGGTAATCAGTCCCGCGGCTCCAATACATCAGCGAGCAGCAAATCGGTGGCAGCGCATGGCGCCTCATCAAGTCGTCCAGGCGCAGCGTCACCCTACTCCGCACACTACGCGAAGCATGCCAAGGAACATCCCAGCTACGCGTACAACAAACGCTTCCTAGAGAGTCTACCCGCTGGCATTGATTTCGAGGCGATTGCCAATGGCCTGCTGCAGAAGTCTGTCAACAAGAGTCCTCGCTTCGAGGACTTTTTTCCCGGCCAGGACATGAGTGAGCTATTCAATCCTGATGCCGGTGCCACTGCTGCCgccgcagctgctgccgctgccgctgcctaCGCGCCCGCCGCCGCCGCAGCCGCCGTACGTGAATCGCCTCTCATGAAAATCAAGCTGGAACAGCAGCAGGCCGCTGAGCTCCCCAACGAGGACTGA
- Protein Sequence
- MPGSGRHWAGWSVAKLIETGGHAWMGAPGAGTSVADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPDELIRSVIKAVVFRDYREIKEDITVHPYVNGQAHGAHYGSGNAAAVNGYHSAVKMAAQNAAMVPPDADNTLSSMTENLRRQILSQQQQHQQQSPHMQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAKHHHSDRRGSENLPDLSALGLIGLPGLNVMPSQPSSHQRASGGNGAGPGGPMHPGAANYAREMSREREREREREREMNRDRELKEAMHARQYGNQSRGSNTSASSKSVAAHGASSSRPGAASPYSAHYAKHAKEHPSYAYNKRFLESLPAGIDFEAIANGLLQKSVNKSPRFEDFFPGQDMSELFNPDAGATAAAAAAAAAAAYAPAAAAAAVRESPLMKIKLEQQQAAELPNED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00573242;
- 90% Identity
- -
- 80% Identity
- -