Dpeg008208.1
Basic Information
- Insect
- Drosophila pegasa
- Gene Symbol
- -
- Assembly
- GCA_035046225.1
- Location
- JAWNOD010000322.1:5625696-5627276[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.7 6.7e+03 -3.2 0.1 11 22 123 134 122 134 0.82 2 4 1.8e-16 2.1e-13 49.6 0.0 2 45 358 401 357 401 0.95 3 4 0.077 89 2.8 0.0 28 37 431 440 430 445 0.90 4 4 3.9e-18 4.6e-15 54.9 0.0 2 42 467 507 466 509 0.96
Sequence Information
- Coding Sequence
- ATGGGGCACTCGTCCACAATAATGGATATACAGCGCGTTCTGCTGCATCAACAAACCAACAATCAGCAATGCGAGGTATTGCTGGTGGCCAAGGATGGCATCAGCGTACGCGCCCATCTGTTCGTGCTAAGTACTTGCAGCGACTTAATGCGGAATCTGCTTGTCGATTTGCCCGTCGGCCAGGAGGCGACTGTAATTTTGCCAGACATCCGTGGTGAGCTGCTCGAGAATGTGCTATCGTTCATTTACATGGGTGAGACTAGCTTAACCTCGGCCATGCTGCCCGAGTTTCTCGGGGCCATTAATTTACTGGGCATCAAGTCGGCCATAAGCTTCGATACCAATCCGACATCCATGACGGCCACAAGTGTTATCAGTGGCGCTATGGCTGTCGAGGAAGCCAAGGCAATTAACGGCTTGCAAATTGCGAATACAGCTCTtatggaggaggaggaagaggatgcGGGAGCTGTGGTTGGTAAATTGGAAGTGGATAATGCCGTACTCACAAATccccaacagcagcacgaGCAGGAAGGCCGAACCCTAGAATACCTGGACGTGTACGGCGAACAGCCCAAAATAACATATTCAATCGAGCACATGGGCGGCACAACAAGCGGgaatcagtatatatatacagagaatACGGGAACATTTACGATAACGCAATCATCTGTGACCAAGATGGGAGTGCAAGGCAATTCAACGGTGGTGGAATCCGTGGAGACGGCTGAGCTAGGCGACGAGGATGTCGAGGCAGAGGTTACAGACGAGCACGAGGAATCCGAGTCACAATTAATTGAGGAGGAATATGTTGGATCGGCTGATCCTTTGATAGAGATGAGCGCAGAGGCGGAGGTTGATATGCACGAAGATGCCATGCACGACGGAgacgaggaggacgacgatgagCTGCTGGATGTGAAACCTCGCAAATCTCATCTCGATATGAAGATGTTAAAGTCAAAGCCACGCCAGCGTCCAGCATCCTCGAAAGCAACGAAGAAGGCAATGACCaaacagcaccaacaacatGCAGCACTTAAAAAGGAATGCAAGGACGATCTCAACGATGCCCTCGACCTCGCAGCGGCTGCAGTGCTGCACGAAGGTCTCAGCTTGCAGAAAGCTGCTGATCGCTACGACATATCGAAGACAGTGCTTTGGCGACGTGTGCGCTCGAATCCAGCCTACATGAGAATAAAGCGAGAGAAGCCTTCGCTTTCGGAAGCATATGAACGGCTGAAGAACGGCGATTCGTTGAAAAGCATCAGCCAGGATCTCCATATACCCATGTCGACGCTGCACCGACACAAGGTGCGTCTTGCGGCGCAGGGTCGCCTGCCCGACTTCGTTGCCTGTCGGCGACGCGACAGCACCCCCAAGGATGAGTTGCGCGAAAAGCTAGCCAAGGCGGTGCACGCCTGCATCAACGATGGCATGACCCAGAATCATGCAGCTAATCTCTTTGAAATACCTAAGAGCACGCTCTGGCGGCACTTGCAACGGCGCGTGACCGAGGCGGAGCGCAAAGTCAAGGAAGAGCACGAGGAAGAGGATGATGATGCTATGAATTAA
- Protein Sequence
- MGHSSTIMDIQRVLLHQQTNNQQCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLVDLPVGQEATVILPDIRGELLENVLSFIYMGETSLTSAMLPEFLGAINLLGIKSAISFDTNPTSMTATSVISGAMAVEEAKAINGLQIANTALMEEEEEDAGAVVGKLEVDNAVLTNPQQQHEQEGRTLEYLDVYGEQPKITYSIEHMGGTTSGNQYIYTENTGTFTITQSSVTKMGVQGNSTVVESVETAELGDEDVEAEVTDEHEESESQLIEEEYVGSADPLIEMSAEAEVDMHEDAMHDGDEEDDDELLDVKPRKSHLDMKMLKSKPRQRPASSKATKKAMTKQHQQHAALKKECKDDLNDALDLAAAAVLHEGLSLQKAADRYDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKNGDSLKSISQDLHIPMSTLHRHKVRLAAQGRLPDFVACRRRDSTPKDELREKLAKAVHACINDGMTQNHAANLFEIPKSTLWRHLQRRVTEAERKVKEEHEEEDDDAMN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00549654;
- 90% Identity
- iTF_00546570;
- 80% Identity
- iTF_00572705;