Basic Information

Insect: Drosophila pectinifera
Gene Symbol: L
Assembly: GCA_008042775.1
Location: VNKC01003530.1:59440-67270[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 9.1e-06 0.00064 19.9 2.9 1 23 158 180 158 180 0.98

2 17 0.14 9.7 6.7 7.3 1 23 186 208 186 208 0.97

3 17 1.5e-07 1.1e-05 25.5 3.2 1 23 214 236 214 236 0.99

4 17 1.1e-05 0.00078 19.6 0.4 1 23 242 264 242 264 0.99

5 17 0.012 0.81 10.1 0.1 2 23 344 368 343 368 0.93

6 17 0.0014 0.095 13.0 0.4 2 23 392 414 391 414 0.96

7 17 0.055 3.9 8.0 0.7 1 23 500 522 500 522 0.97

8 17 0.0038 0.26 11.6 0.1 2 23 530 551 529 551 0.92

9 17 0.00012 0.0086 16.3 0.2 1 23 559 583 559 583 0.94

10 17 4.5 3.1e+02 2.0 0.9 2 23 619 641 618 641 0.94

11 17 0.0023 0.16 12.3 1.1 1 23 690 713 690 713 0.97

12 17 0.0045 0.31 11.4 1.2 2 23 902 924 901 924 0.96

13 17 0.036 2.5 8.5 0.1 1 23 930 952 930 952 0.92

14 17 0.043 3 8.3 0.1 2 23 960 981 959 981 0.96

15 17 0.66 47 4.6 0.5 2 23 1084 1105 1084 1105 0.94

16 17 0.014 1 9.8 0.0 1 23 1115 1137 1115 1137 0.96

17 17 0.0003 0.021 15.1 1.2 1 23 1144 1166 1144 1166 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	9.1e-06	0.00064	19.9	2.9	1	23	158	180	158	180	0.98
2	17	0.14	9.7	6.7	7.3	1	23	186	208	186	208	0.97
3	17	1.5e-07	1.1e-05	25.5	3.2	1	23	214	236	214	236	0.99
4	17	1.1e-05	0.00078	19.6	0.4	1	23	242	264	242	264	0.99
5	17	0.012	0.81	10.1	0.1	2	23	344	368	343	368	0.93
6	17	0.0014	0.095	13.0	0.4	2	23	392	414	391	414	0.96
7	17	0.055	3.9	8.0	0.7	1	23	500	522	500	522	0.97
8	17	0.0038	0.26	11.6	0.1	2	23	530	551	529	551	0.92
9	17	0.00012	0.0086	16.3	0.2	1	23	559	583	559	583	0.94
10	17	4.5	3.1e+02	2.0	0.9	2	23	619	641	618	641	0.94
11	17	0.0023	0.16	12.3	1.1	1	23	690	713	690	713	0.97
12	17	0.0045	0.31	11.4	1.2	2	23	902	924	901	924	0.96
13	17	0.036	2.5	8.5	0.1	1	23	930	952	930	952	0.92
14	17	0.043	3	8.3	0.1	2	23	960	981	959	981	0.96
15	17	0.66	47	4.6	0.5	2	23	1084	1105	1084	1105	0.94
16	17	0.014	1	9.8	0.0	1	23	1115	1137	1115	1137	0.96
17	17	0.0003	0.021	15.1	1.2	1	23	1144	1166	1144	1166	0.97

Sequence Information

Coding Sequence: ATGATGGCCCTAAAGATGTTATATCGCGGTCCCAGTTCGCGTTTGGAGAACTTAATTGAGAAGATCCAGGCCACCAAGGAGATAACCAATAACGACATGTACAGCACCCACACATCGTCCAGCTACTCGCCCAGCATCTCGGACGGCACCATGACGCCCAATTCCCACCACCTGCCCGGAGCTCCACTGGCAGCCGCCGGTGGTCAGGAGGATCTCCACCACTCGGCCGATGGCAAGGCCAATGGTGGCGCCGAtggcgaggagctggccaagccgAAGAGGCTGCCCCACTTccatcaccaccatcaccaccactaccaccaccagcaggcgCTGAAAATCGCCAACAAGCTCCGCAAAATCAACAAGGAGGCCAAAATGGGAGCTGGCGGCGGAGCCGGGCCCGGAGGAGCAGCCTCCAAGTTTGATAAGTTGACAGGAGAGGGCATTAAGGCCCGCGGCGACGGCTCCTATCAGTGTCAGTTCTGCGATAAGTCGTTCCCCCGTCTGGGCTACTTGAAGCATCACGTACAGAGCCATGCCGAACACCTGCCCTTTAAGTGCGAGTACTGCTCCAAGCTGTTCAAGCACAAGCGCTCCCGGGATCGCCACAAGAAGCTGCACACCAACGAGCGCAACTACAAGTGTCCCCATTGCGAGGCGGCCTTCTCCAGGAGTGACCACCTGAAGATCCACATGAAGACGCACGACATCCAGAAGCCGTTCCAGTGCAGCATGTGCAACCGGGGCTACAACACAGCGGCCGCCCTCACCTCTCACATGCAGAAGCACAAGAAGAATGCGGCCATCCTGGCCGCCGGAGGCAATCCCAATGCCCTCAACTACAGTCCCCGGTCCACGGGctccgcctcggcctcggTCTCCAGCAATGGGAGTCTCCAGAAGAGGCGCTATGCTTTGGCCCTGGCCTCGGACAGCAGTCCCAGTCGGCTGGACTTTCCCAAGCGATCGAGGAGCAGCCAGGTGGCTGCAGGTGGTGGCAACACGGCTACGCCCACTCCCCTGCTCAGGTGCAGCTACTGTCCCAAGGCCACGGAGTTCAGCAGCCTGGAGCAGCTCAATGCCCACCTGCAGAGTGtccacgagcagcagcagccggcagtggCCAAGACCCCAGTGGCTCCGGAGGGTGAGGGCTCCGGCTTCCAGCTGAGCTGCGAGTACTGCACCATGAAGTTCGGGAACATAGCCGGTCTCTTCCAGCATATGAGGAGCACGCACCTGGACAGGCTGAGTAGTCCAAACTCCTACTACGAGCACTTCAACCGCCTGGCCACCGCCGGCACCTTCAGTCCCCGCCTGGCCCTGGAGCTGCCCAAGATCAAGCCGGACCTGGGCAGTCCGGAGAGGGAGTCTGCACGTCctgccgaggaggagctgcccacCGACTTGAGCAGCAACAAGAGGCGACCCCAGACCCCGACTTCCCAGCAGCTGCACTCCCAGCTGGCCCCGCCGGCCGCTCCCCCCGGGGTCTTCTTCTGCAATCAGTGCAACGCCGGCCTGCCGGACTTCGAGAGCTTCAGGAATCACCTGAAGAGCCACATCGCCGAGGGCATGCAGATGGTGTGTCCCCACTGCGGGCTGAGTCTGCCGGAGCAGTCGGAGTTCGAGCGGCATGTGGTGGGTCACTTCCTCATCACCGGCTCCGAGTTcaactgcagctccagctgcggcAAGAGCTTCGCCAAGGCGGAGgacctgcagcagcacctcCTTTCGGAGCACGTCCTGACCCTGCTGAAGTGCTCCCTCTGCTCGGAGCTCTGCGAGAGCCGGATGGCCATGCAGCTCCACCTGGCCTGTGCCCACAGCCAGGAGACGAAGCTGCTCCGCTGCAGCGCCTGCCTGGAGCTCTTCCGCTCGGATGCGGAGTTCCATGTGCATGTGAAGACGCGCCACCAGctgggtggcggcggaggtcATCCGCCGCTGGGCGGGGCACCGAGTGCCGCCCCCTCGAACCCCCTGCAGTGCATGTTCTGCCGGGCTGTGTGCTCCTCGGAGCTGGAGATGCACTTCCACCTGGCGGCGCACGCCAGGCAGTTCCGCTGCCCCTCCTGCCCGGAGACCTTCCACGTGGAGTTCCTGCTGGACCGGCACATGCAGAGCCAGCACGGCGGCGTCAAggacaaggagcagcagcggggaTCCCCCAACATGGGCAGCCTCTATGTGAATGCTTTGCTGCCCccgctggcggcggcggcggcggcagcggcggccaccaacaacaacagcagcatcatTGACTACAATGTGGCCTTCAAGGGGCTATTcggagggggaggaggaggagcagcctctggaggaggagcaggatctGGAGCCGGTTCTGGGGCAGCTCCCCCCGCGGGCAACAAGTTCTACAGTCCCCTGCAGGTGGACACCAATGCCCTGAAGGCCCAGACCTCGCCGCACCCCGCCCTCATGTACGGCCTGAGCCAGCGCTATCTGATGGAGATGTACGCCGCCAAGTCCACCTCCCCGGCGGGCAACGAGGGCAACCCCCCGCAGCCGGCACAGGCAGCCCAGGCTGCCGCCGCTCCTCCCCCACCGAGTGCGGCCTCCTCCGCGGCCACCTTCAGTTGCGGGATGTGCGAGCGGCAGGACCTGCGGAGCGAGGCGGAGCTGCACTCGCACCGGAAGCTGGCGCACAACCTAAAGACGGGGGTGAGTTTGAGGTGTGCGTACTGCGCGGGGAACTTCAAGTCCCgggcggagctggagcagcacaTGAAGAGCTGCCACAACTCGACGGGGAAGCACAAGTGCCTCATCTGCGACGAGGTGTTCCCCTCGCCGGCCATCCTGGCCGAGCACAAGCTCCAGCACTCGAAGGTGGGCCAGTCGGGCAAGTGCTCCCACTGCGGGCAGCCTCTCGAGGATGTGGCCGCCTTCCGAGCCCATCTCTCGGAGCACGGCAGTGATGGAGCCACCCTCCCTCTGGCCTGCATCTGCTGCAGGCAGACCCTCCACTCGGAGTTCGAGCTGAGCCTGCACGCCAAGTTCCACACCAAGTCCGCCTCCAGCGGGGGCAGCCTCCAGGAGCCGGTGTGCGCCCTCTGCCTGGAGCCTCTCCCCGACGGACCCCTCGAGGGTCCGGCCAAGCTCTGCGAGAAGTGCTGCCGCAAGCACAACCTGAACGGGAAGCGGGCCAAGCCCAGCGGCGATCCTCCGCTGCAGGCACCTCCCTCAGCGGCAGTCCCGGCACCCTTCGTGGAGAACCGCTGCAACCTGTGCAAGATGATCCTGCCGCATGCCCAGAAGCTCCAGGAGCACCTGGTGGAGCACACCTTCGCCGGCACCGAGCAGCGCGGCTTCAACTGCTACATCTGCTCGGCGGTCTTCACCGCCGCCGGCGGCCTCCTCAACCACATGGCGGAGCATGGAGCCCACTCGCGGCCCTATGACTGCAGCTTGTGCCCCGAGAAGTTCTACTTCCgggcggagctggagcaccACCAGCGGGGCCACGAGCTGAGGCCACAGGCCCTGAAACCTTTGCCCAAGGTGGAGGTGCCCTCCATCCGCCACAGTTCCCCCCTGAGTGAGAGTCGCAGCAGGAGTCCCACCATTGTCAAGCAGGAGCTCTACGAGACGGACACGGTGGAGTCAGCTCCGGGAGAGGATGAGCAGGAAGAGAATCCCCCGGAGGACGAGGAGTACATCGAGGTGGAGCAGGTGCCCCACGAGACGCGTCCCAGTGAGTTAGCCTCGCAGATGGAAAGGTCCACCAGCAGCGCCTAA
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEITNNDMYSTHTSSSYSPSISDGTMTPNSHHLPGAPLAAAGGQEDLHHSADGKANGGADGEELAKPKRLPHFHHHHHHHYHHQQALKIANKLRKINKEAKMGAGGGAGPGGAASKFDKLTGEGIKARGDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCSKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASASVSSNGSLQKRRYALALASDSSPSRLDFPKRSRSSQVAAGGGNTATPTPLLRCSYCPKATEFSSLEQLNAHLQSVHEQQQPAVAKTPVAPEGEGSGFQLSCEYCTMKFGNIAGLFQHMRSTHLDRLSSPNSYYEHFNRLATAGTFSPRLALELPKIKPDLGSPERESARPAEEELPTDLSSNKRRPQTPTSQQLHSQLAPPAAPPGVFFCNQCNAGLPDFESFRNHLKSHIAEGMQMVCPHCGLSLPEQSEFERHVVGHFLITGSEFNCSSSCGKSFAKAEDLQQHLLSEHVLTLLKCSLCSELCESRMAMQLHLACAHSQETKLLRCSACLELFRSDAEFHVHVKTRHQLGGGGGHPPLGGAPSAAPSNPLQCMFCRAVCSSELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGVKDKEQQRGSPNMGSLYVNALLPPLAAAAAAAAATNNNSSIIDYNVAFKGLFGGGGGGAASGGGAGSGAGSGAAPPAGNKFYSPLQVDTNALKAQTSPHPALMYGLSQRYLMEMYAAKSTSPAGNEGNPPQPAQAAQAAAAPPPPSAASSAATFSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCAGNFKSRAELEQHMKSCHNSTGKHKCLICDEVFPSPAILAEHKLQHSKVGQSGKCSHCGQPLEDVAAFRAHLSEHGSDGATLPLACICCRQTLHSEFELSLHAKFHTKSASSGGSLQEPVCALCLEPLPDGPLEGPAKLCEKCCRKHNLNGKRAKPSGDPPLQAPPSAAVPAPFVENRCNLCKMILPHAQKLQEHLVEHTFAGTEQRGFNCYICSAVFTAAGGLLNHMAEHGAHSRPYDCSLCPEKFYFRAELEHHQRGHELRPQALKPLPKVEVPSIRHSSPLSESRSRSPTIVKQELYETDTVESAPGEDEQEENPPEDEEYIEVEQVPHETRPSELASQMERSTSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00548267;
90% Identity: iTF_00488807;
80% Identity: -