Basic Information

Insect: Drosophila paulistorum
Gene Symbol: -
Assembly: GCA_018152135.1
Location: JAECXG010000805.1:3898003-3901081[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00034 0.027 15.0 4.5 1 23 186 209 186 209 0.97

2 16 0.014 1.1 10.0 1.0 1 23 238 261 238 261 0.97

3 16 0.00059 0.045 14.3 3.3 1 23 310 333 310 333 0.96

4 16 0.0057 0.44 11.2 0.6 2 23 387 408 386 408 0.97

5 16 5.6 4.3e+02 1.8 1.5 1 20 526 545 526 547 0.87

6 16 0.01 0.79 10.4 1.2 1 23 556 578 556 578 0.94

7 16 8.4e-05 0.0065 16.9 0.8 1 23 585 608 585 608 0.96

8 16 0.00031 0.024 15.2 1.0 3 23 618 638 616 638 0.96

9 16 0.0038 0.29 11.8 0.0 2 22 665 685 664 688 0.90

10 16 0.0041 0.32 11.6 1.1 1 23 724 747 724 747 0.96

11 16 3.8 2.9e+02 2.3 1.7 1 22 754 775 754 775 0.93

12 16 0.0054 0.42 11.3 1.8 1 23 784 807 784 807 0.95

13 16 1.5e-05 0.0012 19.3 0.5 1 23 832 855 832 855 0.97

14 16 0.035 2.7 8.7 0.2 1 23 865 887 865 887 0.94

15 16 2.3e-05 0.0018 18.7 3.3 1 23 893 915 893 915 0.99

16 16 7.6e-06 0.00059 20.2 3.6 1 23 921 943 921 943 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00034	0.027	15.0	4.5	1	23	186	209	186	209	0.97
2	16	0.014	1.1	10.0	1.0	1	23	238	261	238	261	0.97
3	16	0.00059	0.045	14.3	3.3	1	23	310	333	310	333	0.96
4	16	0.0057	0.44	11.2	0.6	2	23	387	408	386	408	0.97
5	16	5.6	4.3e+02	1.8	1.5	1	20	526	545	526	547	0.87
6	16	0.01	0.79	10.4	1.2	1	23	556	578	556	578	0.94
7	16	8.4e-05	0.0065	16.9	0.8	1	23	585	608	585	608	0.96
8	16	0.00031	0.024	15.2	1.0	3	23	618	638	616	638	0.96
9	16	0.0038	0.29	11.8	0.0	2	22	665	685	664	688	0.90
10	16	0.0041	0.32	11.6	1.1	1	23	724	747	724	747	0.96
11	16	3.8	2.9e+02	2.3	1.7	1	22	754	775	754	775	0.93
12	16	0.0054	0.42	11.3	1.8	1	23	784	807	784	807	0.95
13	16	1.5e-05	0.0012	19.3	0.5	1	23	832	855	832	855	0.97
14	16	0.035	2.7	8.7	0.2	1	23	865	887	865	887	0.94
15	16	2.3e-05	0.0018	18.7	3.3	1	23	893	915	893	915	0.99
16	16	7.6e-06	0.00059	20.2	3.6	1	23	921	943	921	943	0.98

Sequence Information

Coding Sequence: ATGACAAGGATTTGCCGTGTTTGCGCTGGCCCTGATGGGCGATTTAGGATGGAGACTCCTGTTGAGAAATATGCAGGGAAAACGTTCAGTAAATTGCTATTCGATTTGACCAAAATTGAGATCACTGCTGTCCAGATGGAGAAGTTGACGTCCTGGATATGCCGTAATTGTGCCCATAAATTGCAGCATTCATATGATTTTGTGTCGAAGGCTAAAAGAACACACGAGATGTGGTTGGAAAAAATTACCGATGATCCTATCTGCTTACGTGAGACTCCCATACATTTAATGGAGATTGAAGGGGTAACCATTAAAATGGAAGATGTGGAACCAACTGTACCTACAGCAGTTCCCTGCTCTGTTCCCGATCCTCTAGTGCGTATAGGCGTCGAAAAGCGTTGCATATCTGATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGAAGAAGTCTCAGGCCTTTGCCAATTTGAAGAAGCATAAATGTAACCAATGTAGTAAAGCCTTTAAATATATCACAAATCTGTACCGGCACAAGCAAACGGTGCACAATACCGATAAGGATATTAAAAAAAGTGTGAGGAAACTAGCAATAAATCGAGAGCAACTAAATGAAAACGAGGATGACAACTATTATAAATGCGATCAGTGTGATAACTCCTACAAGTATGTTATGCTTCTAGTCCAGCACAAGCAAAAGGTTCATGGAGTCCATCAAATGCCCTCCAGTCGCGGGCAAAGGGCACCACCTCCACAGAGACCCAAACTGAATACTGACATGCTGGTGCATAGTCTTCTCAAAGCAGTGGAAATTTCAGATGAAGATGGCAGTTCCAGTTCGGATAATTACTACAAATGCGATCAATGTGACAAATCCTATAAATACATTGTAAGTCTCATCAAGCACAAACATAAGGAACATACAGAAAACTCTAGGGATTCAGACGACGGCAATGATGAAATCCAGGCCTCCACATCCAACTCTGCTAGCATCGGTGGTCCTTTAAAGACTTCTCGTATCAATCGGCGTGTTCAGGACTTTGACCCCCTTCGTTGTCAACCGAATGGTTCTAAGGAGATTAAATGCATGATCTGCTTACGTCGTTTTGCGAAACTGGGTGAACTCCGCTATCATCTGAAATACCACCCAGATGACTTTAATTTTGATGCTCACGGCGAGCCTATTGAACGTATAGCTGAGGGCTTCTTCAAGACAGCCGTTGAATCGACAGCAGAGGGTCTAAAGCGACGCATTTTTAAGGATCTTAACATGGGATTATATGGTCGTTACTACTCCATTACCAACGAGGCACGCTATGAGTTGAGTCTAGATAGCTCCGATACAGATAGTGATGGCGGTGATGCCGATGCCCAGGTGATCATCCGGCGGAGTTATGCATGTGAATTGTGTAATACCTCCAATCAGACGGCTGTCTGGCCCCGCAAATATCAACTTCATGATCATCATAGGCAATGTCACACGTGGCTAGAGGCTCCCCATGTCTGTCAGCGTTGCGACTCGCGCTTCTTGAGTGAAAAACTTCTAGAGCATCACACTAGTCAGCTTTGTAATAATACATTGAAACGTTATCAATGCGACAAATGTCCACAGCGTTTCTTTTGGCGTAAAAACTTGCGCTCTCACTTGGTGGATCATAAAGATAAGCAAGAAAATTATCCCTGCGATCAATGTCAGCGTAGTTTTCAGGACAAAAGTTCTGTGACGAGGCATAAATTAATGATACATGCAGATGGAAAGAGTCAACTTATAGCTTGCCGTTGGTGCACTCGGGTTTTCTACCGACCAGCACTGCTTCATAAGCATCTCCAACGCCATGGTTTCAGTGGGCAAGATTTACCCTTGGCTGAAACATTATTGGCCGATGCAGCCAAACCCTTAGGGCCAAAGAACATTCAATGCAAACTCTGTGACCTTAGATTTATTACCATTGCAGACTTGCGTGGTCACATGGCCATGTTGGAGCACGATACTCAGGTTTCCAATTATATGATCAGTACTGAAGCTGGATTTGAGCTGCAACTGGATGATACAGATGATAGCGACGATGATGATGGCCATACAAGACGATCCTACACATGTGATCTCTGTCAAATGAAATTCCCTCGCAGACGCGAAATGAGTGAGCATCAATACTCGTTGCATACGTTTGATAAACTGCCACATACATGCGATCAATGTATATACAAAACAGTGGATAAGCTCATGTTGAAACATCATCAACTGACACAATGCCAAAACAAAGAGAAGAAATTTATTTGCACGCATTGCGGTTATCGCTTCATGTGGCAAGAGAATCTCGACAAGCACTTGTCCAGCCAGCATCCGAAACCAAAAACAAGCAGCTGCGATCAACAGACGCAAAGTTCTTCTATACGTCGAAAAAGACGATTCAGATACCAATGTCCCCACTGTTGGCGCTCTTTTGTTGTTCAGCCCAGCTTGGATAAGCACATTCGAGATATGCATGTGGCTAAAAAGAATCCTGGCAAGAAATATCTCTGTTCGCTCTGCGGACTGGAATCCCTTACACCCAATAAGTTAAATATTCATATGCGTCGCCATATGGGGGAAAAACCCTTCAAATGTGATCTCTGTGATATGAGTTTTACGGTTCATTACGAACTAAAAGTGCACAGAAGAAAGCACACAGGCGAACGTCCTTATAAATGTACATTCTGTGACAAACATTTCGCTCGGCCCGACAAACTGAGACGTCATGTCTATATGCACAGCGATAAGCGTTAG
Protein Sequence: MTRICRVCAGPDGRFRMETPVEKYAGKTFSKLLFDLTKIEITAVQMEKLTSWICRNCAHKLQHSYDFVSKAKRTHEMWLEKITDDPICLRETPIHLMEIEGVTIKMEDVEPTVPTAVPCSVPDPLVRIGVEKRCISDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKSQAFANLKKHKCNQCSKAFKYITNLYRHKQTVHNTDKDIKKSVRKLAINREQLNENEDDNYYKCDQCDNSYKYVMLLVQHKQKVHGVHQMPSSRGQRAPPPQRPKLNTDMLVHSLLKAVEISDEDGSSSSDNYYKCDQCDKSYKYIVSLIKHKHKEHTENSRDSDDGNDEIQASTSNSASIGGPLKTSRINRRVQDFDPLRCQPNGSKEIKCMICLRRFAKLGELRYHLKYHPDDFNFDAHGEPIERIAEGFFKTAVESTAEGLKRRIFKDLNMGLYGRYYSITNEARYELSLDSSDTDSDGGDADAQVIIRRSYACELCNTSNQTAVWPRKYQLHDHHRQCHTWLEAPHVCQRCDSRFLSEKLLEHHTSQLCNNTLKRYQCDKCPQRFFWRKNLRSHLVDHKDKQENYPCDQCQRSFQDKSSVTRHKLMIHADGKSQLIACRWCTRVFYRPALLHKHLQRHGFSGQDLPLAETLLADAAKPLGPKNIQCKLCDLRFITIADLRGHMAMLEHDTQVSNYMISTEAGFELQLDDTDDSDDDDGHTRRSYTCDLCQMKFPRRREMSEHQYSLHTFDKLPHTCDQCIYKTVDKLMLKHHQLTQCQNKEKKFICTHCGYRFMWQENLDKHLSSQHPKPKTSSCDQQTQSSSIRRKRRFRYQCPHCWRSFVVQPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLTPNKLNIHMRRHMGEKPFKCDLCDMSFTVHYELKVHRRKHTGERPYKCTFCDKHFARPDKLRRHVYMHSDKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00523880;
90% Identity: iTF_00612249; iTF_00618587;
80% Identity: -