Basic Information

Insect: Drosophila paulistorum
Gene Symbol: -
Assembly: GCA_018152135.1
Location: JAECXG010000499.1:413562-416734[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.2e-05 0.0017 18.8 0.7 1 23 233 256 233 256 0.96

2 17 0.00024 0.018 15.5 1.1 1 23 262 284 262 284 0.98

3 17 3 2.3e+02 2.6 0.4 2 23 316 337 315 337 0.91

4 17 5.2e-05 0.004 17.6 0.9 1 23 417 440 417 440 0.97

5 17 0.18 14 6.5 0.7 1 19 447 465 447 468 0.93

6 17 0.035 2.7 8.7 3.8 1 23 477 499 477 499 0.95

7 17 4.9e-06 0.00038 20.8 0.4 1 23 506 529 506 529 0.97

8 17 9.5e-05 0.0074 16.8 1.4 2 23 537 558 536 558 0.96

9 17 0.0043 0.34 11.6 0.6 2 21 585 604 584 605 0.94

10 17 0.0058 0.45 11.2 2.0 1 23 663 686 663 686 0.96

11 17 0.095 7.4 7.3 1.2 1 23 723 746 723 746 0.95

12 17 0.00013 0.01 16.4 1.6 2 23 785 807 784 807 0.95

13 17 0.00031 0.024 15.2 1.5 1 23 821 843 821 843 0.95

14 17 7e-05 0.0054 17.2 1.8 1 23 849 871 849 871 0.99

15 17 2.3e-07 1.8e-05 25.0 2.4 1 23 877 899 877 899 0.98

16 17 6.3e-05 0.0049 17.4 2.3 1 23 905 927 905 927 0.96

17 17 3.2e-05 0.0025 18.3 0.6 1 23 933 957 933 957 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.2e-05	0.0017	18.8	0.7	1	23	233	256	233	256	0.96
2	17	0.00024	0.018	15.5	1.1	1	23	262	284	262	284	0.98
3	17	3	2.3e+02	2.6	0.4	2	23	316	337	315	337	0.91
4	17	5.2e-05	0.004	17.6	0.9	1	23	417	440	417	440	0.97
5	17	0.18	14	6.5	0.7	1	19	447	465	447	468	0.93
6	17	0.035	2.7	8.7	3.8	1	23	477	499	477	499	0.95
7	17	4.9e-06	0.00038	20.8	0.4	1	23	506	529	506	529	0.97
8	17	9.5e-05	0.0074	16.8	1.4	2	23	537	558	536	558	0.96
9	17	0.0043	0.34	11.6	0.6	2	21	585	604	584	605	0.94
10	17	0.0058	0.45	11.2	2.0	1	23	663	686	663	686	0.96
11	17	0.095	7.4	7.3	1.2	1	23	723	746	723	746	0.95
12	17	0.00013	0.01	16.4	1.6	2	23	785	807	784	807	0.95
13	17	0.00031	0.024	15.2	1.5	1	23	821	843	821	843	0.95
14	17	7e-05	0.0054	17.2	1.8	1	23	849	871	849	871	0.99
15	17	2.3e-07	1.8e-05	25.0	2.4	1	23	877	899	877	899	0.98
16	17	6.3e-05	0.0049	17.4	2.3	1	23	905	927	905	927	0.96
17	17	3.2e-05	0.0025	18.3	0.6	1	23	933	957	933	957	0.90

Sequence Information

Coding Sequence: ATGAAGGTACCGATTGTCTGTCGTACCTGCGACAGTGCTAAAGACACCGAGAAGCTATATAATCTAGACACGCCGAGCAAAGAATATCCGGAAAAATTGTTGTCCGAAATCCTCGGTGAATTAATAAATATTGATCTAAAGCTGCATATGTCCAGTGACCAGAAGTTGCCGCAATCGTTGTGTCAATCTTGTTTAAAGAGATTAACTGCTTCCTATGACTATATGAAACAAGCTTTGTCCGCTAACTTTTTGCTGATGCGGCAGCTTCAAGATTGCTTGCAGGAGTCGCCAATGGAGCTATGTGCTGAGCAACATGTGGAGGTTAAAATGGAAACTGAAGGGGATGAGAGTGATAGAGAAAACGGAGAGACTGGGAAGATAACCTGTACTGAATTGCCCAATCTAGAAGAATCTGATGCTATTGGTGGTGATGCTGATGGGGATACCAAGAGACTAATTGATCCCTTAACGATGTTGGATCCGACGGCAGTGAAAAAGGAAAACGACATACAACATCCCCACATAGAAGAGGAGGACGATGAATTGGTTAATGCTAATGCTAATTGTAACGATGATGGATTCGATGACTCCGACGACGATGACGATGAAGACTCACTTGATAATATTCCTCTGCAACAACGGGTTTTAAAATGGAAAAAAAAGCGTAGTACTCACAAGTTGACAAGACGACGACCTTTTGAATGTAGTGAATGTCCGAAAAGTTTTATACGAGGCGAATCCTTAAAGAAGCATAAGTCTAGGATCCATCAATCATCTGGCCTGTTTTCTTGCTCTCTTTGCATTCGCAAATTTAACCGTCAAGAAAATTTGGAGTCTCATCTGAAGGTTCATAGTGAATCAAAGAGATCATCGCATCTTAGCGAGCACAAGAAGGCCAAATCGATTGATGTCAATCTTTGCAAACCCCATGGTTATAAACTTATTGAATGCATGCTCTGTCAGAGTCAATATAACAAAATATTAGATTTACGCCGCCATTTAGAGAATCATCCAGAAATTACTACGCTGGCCAAACGGCCCAATGTAGAGTCTCTAGCCGATTTCTTTTATCCGGACTCAAAAAATATTGGAGAAGAGCAGCTAAAGCAGCTCATAAGTCAAGACTTAATGGCTGGCCATTTTCAGCGCTTCTATTCAATTACCAATCAATCTGGTTATGAAATCGATTTGGACAGTTCAGAAACCGATAGCGAAGGTGAGGCAGAGCAAGAATCACAATATCTGGAATACACTTGTGAGCTGTGCCCGCAGAGATATGCGCGAAAGTATCAGCTTTACGATCACCAGCGTCAAATTCATCCCTGGTTGGAGGCTCCCCATGTCTGTGGTCGTTGTCAGGCCAGATTTGTCAGTCTTCAACTACTGCGACACCATAATGAGTCACAGTGCCGTAATGCCCAGAAACGATTTTTGTGCTACAAATGTCCGTTGCGATTTCGATGGAAACATAATTTCAGGAGTCACATTCGGGAGCATCGAATTACGAATCAAACTTTTGAGTGTCCCGACTGTAAGCGTGTATTTGACAAAAAAAAGTCTCTCACGGTCCATTTACTCAGCGTCCATGCCGATGAGTCAAAGTTGCTGCCCTGCCAGTGGTGTAGTCGCAAATTCTACCGCCGTGATTACCTAGTTAAGCATTTAAAGCGACATGGATTTAAAGAGCAAGACATACCGTTAGCAGAGACTTTAATACAAGCCACTTCAAAGCCCAACGGCACTAAACGGATTAGCTGTAAGATATGTAACTCTCAGTTTAAACGAGTGCATGAACTACGAACCCACATCCAACTTGAACTGGGGCTGAAGCTAACGATGTCGTCGTCGGCATCAGAACAGCCAAATATCAATTCACCCCTAAACTATTCCATAACCAATGAATCAGGATTCGAGCTGCAGTTAAGTGATTCGGAAACAGAGGACGATATGTTAATGCCGGCAGTAGGTGGTGGACACAATGTTGGCTATATGTGTGAGCTGTGTAGTATACAATGTCGCCGCAAATACGAAATGATTCAGCATCAGCGGGCTATGCATCGTTTCGACAAGATGCCTTACGAGTGCGAAATGTGCATCTTTAAGTGTGTTTCCAAGAGCATTATGGAGCATCATCGATTGGGACAATGCGGTAACTTAAATAAAAAATTTTCATGTGGACAGTGCAGCTATAGATTTATGTGGCCAGAGAACCTTGAGCAGCATCTCTGTTTGCAACATGGCCAAACTCCATCTACGGCTGAGCAGCAGCTTTTAATCAGCAATGACATCCCCACGGCAAAAACAATTGCCAAGGAGAAACAACAGCAGACGCAAATAGATGTCCAGCTACTTCAATGTCCACACTGTGATAGAACCTATCAAATGAAGTCTCGTCTAAACAATCACATCCGTGATGTGCACGTAAATGGCGATCGGAAGCGAAAGGAGGCGGAAAAAAGATTTCTTTGCTCACTGTGCGGACGTGAGACAAAAACAGCCGCTTGTCTAGTTACTCATATGCGACGACATACTGGAGAAAAACCCTTTAAATGCGATTTTTGTGAAATGGCGTTCCCCCGACACTCTGAAATGACAGCACATCGGCGAATGCATACAGGTGAAAAACCATACCATTGCACGGTATGTGGCAAGGACTTCGCTCGCTCGGACAAATTAAAGAGACACATGCTAACACACAGTGGATTGAAACCGCATGCCTGTACTTATTGTGAAAAAAGTTATCGGCAGGCGAAGGATCTAAAGTTACATCTCCAACAGCATACTGGGGAGTGCCCCTTCATTTGCGGCACATGCGGAGAGAGGTTCATCCAAAGCAGCACACTGGAAAAGCACCGAATGATGCGACGGCATTTTGACGAGGTTGAGGGGGCATCGATGTCATTGACACGAAATTAG
Protein Sequence: MKVPIVCRTCDSAKDTEKLYNLDTPSKEYPEKLLSEILGELINIDLKLHMSSDQKLPQSLCQSCLKRLTASYDYMKQALSANFLLMRQLQDCLQESPMELCAEQHVEVKMETEGDESDRENGETGKITCTELPNLEESDAIGGDADGDTKRLIDPLTMLDPTAVKKENDIQHPHIEEEDDELVNANANCNDDGFDDSDDDDDEDSLDNIPLQQRVLKWKKKRSTHKLTRRRPFECSECPKSFIRGESLKKHKSRIHQSSGLFSCSLCIRKFNRQENLESHLKVHSESKRSSHLSEHKKAKSIDVNLCKPHGYKLIECMLCQSQYNKILDLRRHLENHPEITTLAKRPNVESLADFFYPDSKNIGEEQLKQLISQDLMAGHFQRFYSITNQSGYEIDLDSSETDSEGEAEQESQYLEYTCELCPQRYARKYQLYDHQRQIHPWLEAPHVCGRCQARFVSLQLLRHHNESQCRNAQKRFLCYKCPLRFRWKHNFRSHIREHRITNQTFECPDCKRVFDKKKSLTVHLLSVHADESKLLPCQWCSRKFYRRDYLVKHLKRHGFKEQDIPLAETLIQATSKPNGTKRISCKICNSQFKRVHELRTHIQLELGLKLTMSSSASEQPNINSPLNYSITNESGFELQLSDSETEDDMLMPAVGGGHNVGYMCELCSIQCRRKYEMIQHQRAMHRFDKMPYECEMCIFKCVSKSIMEHHRLGQCGNLNKKFSCGQCSYRFMWPENLEQHLCLQHGQTPSTAEQQLLISNDIPTAKTIAKEKQQQTQIDVQLLQCPHCDRTYQMKSRLNNHIRDVHVNGDRKRKEAEKRFLCSLCGRETKTAACLVTHMRRHTGEKPFKCDFCEMAFPRHSEMTAHRRMHTGEKPYHCTVCGKDFARSDKLKRHMLTHSGLKPHACTYCEKSYRQAKDLKLHLQQHTGECPFICGTCGERFIQSSTLEKHRMMRRHFDEVEGASMSLTRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00503417;
90% Identity: iTF_00612240;
80% Identity: -