Basic Information

Insect: Drosophila paulistorum
Gene Symbol: -
Assembly: GCA_018152135.1
Location: JAECXG010000684.1:17855099-17862295[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.2e-05 0.0017 18.8 2.1 1 23 231 253 231 253 0.97

2 18 7e-06 0.00054 20.3 0.3 1 23 259 281 259 281 0.97

3 18 0.0011 0.083 13.5 0.9 1 23 287 309 287 309 0.95

4 18 1.5e-05 0.0012 19.3 3.1 1 23 315 337 315 337 0.97

5 18 3.5e-05 0.0027 18.1 4.7 1 23 343 365 343 365 0.99

6 18 6.4e-05 0.005 17.3 5.7 1 23 371 393 371 393 0.97

7 18 3.1e-07 2.4e-05 24.6 4.3 1 23 399 421 399 421 0.98

8 18 1.1e-07 8.7e-06 26.0 2.4 1 23 427 449 427 449 0.97

9 18 6.5e-05 0.0051 17.3 6.7 1 23 456 478 456 478 0.97

10 18 0.00011 0.0088 16.5 6.5 1 23 484 506 484 506 0.98

11 18 1e-05 0.00079 19.8 4.5 1 23 512 534 512 534 0.98

12 18 7.4e-06 0.00057 20.3 8.1 1 23 540 562 540 562 0.98

13 18 6e-06 0.00047 20.6 7.6 1 23 568 590 568 590 0.97

14 18 6.7e-07 5.2e-05 23.6 7.7 1 23 596 618 596 618 0.98

15 18 0.00021 0.016 15.7 9.5 1 23 624 647 624 647 0.95

16 18 7.4e-05 0.0058 17.1 0.9 1 23 653 675 653 675 0.98

17 18 0.00079 0.061 13.9 4.4 1 23 685 707 685 707 0.98

18 18 9.3e-06 0.00072 20.0 1.6 1 23 713 736 713 736 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.2e-05	0.0017	18.8	2.1	1	23	231	253	231	253	0.97
2	18	7e-06	0.00054	20.3	0.3	1	23	259	281	259	281	0.97
3	18	0.0011	0.083	13.5	0.9	1	23	287	309	287	309	0.95
4	18	1.5e-05	0.0012	19.3	3.1	1	23	315	337	315	337	0.97
5	18	3.5e-05	0.0027	18.1	4.7	1	23	343	365	343	365	0.99
6	18	6.4e-05	0.005	17.3	5.7	1	23	371	393	371	393	0.97
7	18	3.1e-07	2.4e-05	24.6	4.3	1	23	399	421	399	421	0.98
8	18	1.1e-07	8.7e-06	26.0	2.4	1	23	427	449	427	449	0.97
9	18	6.5e-05	0.0051	17.3	6.7	1	23	456	478	456	478	0.97
10	18	0.00011	0.0088	16.5	6.5	1	23	484	506	484	506	0.98
11	18	1e-05	0.00079	19.8	4.5	1	23	512	534	512	534	0.98
12	18	7.4e-06	0.00057	20.3	8.1	1	23	540	562	540	562	0.98
13	18	6e-06	0.00047	20.6	7.6	1	23	568	590	568	590	0.97
14	18	6.7e-07	5.2e-05	23.6	7.7	1	23	596	618	596	618	0.98
15	18	0.00021	0.016	15.7	9.5	1	23	624	647	624	647	0.95
16	18	7.4e-05	0.0058	17.1	0.9	1	23	653	675	653	675	0.98
17	18	0.00079	0.061	13.9	4.4	1	23	685	707	685	707	0.98
18	18	9.3e-06	0.00072	20.0	1.6	1	23	713	736	713	736	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTAAGCGCTGCCAGTTCGGTACCATCGGTAATTGCACCGGTGGTCACCACTGGAGGCACCACCATTACCTTGGGCGGTGGTCCACCACCGCCATCCTCATCATTGGCCAAATCGGAGATTAAAGAAGACGGCAAACCGCCGCATGGCATGGAATTGTATAAAGTGAACATTGAGGATATTTCGCAATTGTTTACATATCATGAAGTCTTTGGCAAAATACATGGAGATGTTGTCAATCATCAATTGGTGGCAGCGGCTCATGGTGGACAATTGCCACCGCCTCCACCGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTGGAGTCCCCACAACGAGTAGTGTGGGCGGTGGTGGAATACCCGGAGTAGTTACAACCACAACAAGCTCATCCACCGGGAGCAGTGGCGGCGCTGGTGGTGCCGCCGGCGGGGGTACCACATCGAGCACAACGGGTGAGTTGCTTATGCCTAAAATGGAGGGCGGCCTACATGGCAACGTGGACGCTGGTGGCGGCGGTCAAACCCAGGTGGCCTTGGCCCCTGATGGCACCCCAATTGCTACGGGGACGCATGTCTGCGATATATGTGGCAAGATGTTCCAGTTTCGGTATCAGCTAATTGTCCATCGTCGCTATCATAGCGAACGGAAACCGTTTATGTGTCAGGTTTGCGGTCAGGGTTTTAGCACATCGCAGGATCTGACACGACATGGTAAAATCCATATTGGCGGACCGATGTTCACCTGCATCGTTTGCTTCAATGTCTTCGCTAATAACACCAGCCTGGAGCGGCATATGAAGCGTCATTCAACGGACAAACCATTCGCCTGCACCATTTGCCAAAAGACATTTGCCCGCAAAGAGCATCTGGACAATCATTTTCGTTCGCACACGGGCGAAACGCCCTTCCGTTGCCAGTACTGCGCAAAGACGTTTACGCGCAAGGAGCATATGGTTAACCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTTACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACGCCGCATCAGTGCGATGTCTGTGGCAAGAAATACACACGCAAGGAGCATCTAGCTAATCATATGCGATCCCATACAAACGAGACACCGTTTCGCTGTGAGATTTGCGGCAAGAGCTTCAGCCGCAAGGAACACTTTACCAATCACATACTCTGGCATACAGCAGGCGAGACGCCGCATCGTTGCGATTTCTGCTCCAAGACGTTTACGCGCAAGGAACATCTGTTAAATCACGTGCGTCAGCACACGGGTGAATCGCCCCATCGCTGCTCCTACTGCATGAAGACCTTTACACGCAAGGAGCATCTGGTCAATCACATTCGTCAGCACACGGGTGAGACACCGTTCAAGTGCACCTACTGCACAAAAGCGTTCACGCGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACCTATTGCACCAAGACGTTCACACGCAAGGAGCATCTGACGAATCATGTGCGCCAGCATACTGGCGACTCGCCGCATCGTTGCTCCTACTGCAAGAAGACATTCACACGCAAGGAGCATTTGACAAATCATGTGCGTTTGCATACGGGAGATTCGCCGCACAAGTGCGAATATTGCCAGAAGACATTCACACGAAAGGAGCATCTCAATAATCATATGCGTCAGCACTCTAGCGATAATCCGCATTGTTGCAATGTCTGCAATAAGCCGTTTACTCGCAAGGAGCATCTGATCAATCATATGTCACGTTGCCATACAGGCGATCGTCCTTTCACATGCGAAACATGCGGCAAATCGTTTCCACTCAAGGGCAATCTATTGTTCCATCAGCGTAGCCATACCAAGGGCCAGGAAATGGAACGTCCGTTCTCATGCGAAAAGTGCCCCAAAAACTTTATATGCAAAGGTCACTTGGTATCGCATATGCGATCCCATTCGGGCGAGAAACCCCACGCGTGCACACTATGCAGCAAGGCGTTCGTTGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCATCCGGATGCCATGATGCCGCCACCACCAGTGCATCCGCATCCGCAAATACCAGCCGGTGTGCTGACACAAGTCAAACAGGAAGTGAAACCGATTATAATTCCCCACCATTCGGCGACAACGATGCACACCATACAACAGATAACATCGGGAGGAGCAGCCGGAGCCGGTGGAGCCCAACTGACGCCGGGTCTGGTGCCGCTGGTGACATCAACTCTGATTTCTCATAATGCTGCAGCGGCGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCAACATTTGCCGGCCAATGTGGAACAACATCCGGTGGTTTACTAA
Protein Sequence: MQHVSAASSVPSVIAPVVTTGGTTITLGGGPPPPSSSLAKSEIKEDGKPPHGMELYKVNIEDISQLFTYHEVFGKIHGDVVNHQLVAAAHGGQLPPPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVPTTSSVGGGGIPGVVTTTTSSSTGSSGGAGGAAGGGTTSSTTGELLMPKMEGGLHGNVDAGGGGQTQVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFSTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTMHTIQQITSGGAAGAGGAQLTPGLVPLVTSTLISHNAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: iTF_00604241;
80% Identity: -