Dpau001118.1
Basic Information
- Insect
- Drosophila paulistorum
- Gene Symbol
- lrrfip2
- Assembly
- GCA_018152135.1
- Location
- JAECXG010000821.1:15127327-15135388[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-124 6.2e-120 400.1 25.9 1 299 70 363 70 364 0.99 2 2 0.09 1.7e+03 -1.9 3.2 135 151 398 414 367 438 0.43
Sequence Information
- Coding Sequence
- ATGGAAGCGATCGAACTGGGCGATCAAATAATGAACAATAAAGAAGATCATACGACGATCATGCCACCTACACCTACCACCACAGAACCTTGTCTAATTGACGACGGCGACGATGATGATGATGATGAGAAACTGTCTGGCGGCGACGACGAGAGTGAGTCCGAAGAGGAAGTGTTAGTGCAATTCTTGGGCGAGGCAAATCGCATTGCCGAAGCTCGTTTAGCGGCGCGGCGTCAAGCTCGTGCAGAGGCACGGGAAATACGTATGCGGGAGCTTGAGCGTCAGCAGAAGGAGCAGGAACAAAATGCCGATCGTGTCTTTGACATGCAAAACACCAGCGGTGCCGGTGCTGGTGGAGACACAATTTCCACCCACCCTGCACGTCTTGTGTATGGCGGTGGCCTCTTGAATGTAACCCGTGCCACAGCATCGCGTCGCAGTAGCGAGGATTCATTGGAAGATGAAAGCCGAAGTTTACGTGACATGAAACATGAGCTCAAAGACGTTGAAGAACGCTTCCGAAAAGCAATGATAACGAATGCTCAGCTGGACAATGATCGCGCCTCACAAACATACGAAGTCAAGCTACTCAAGGACAGAAGCGAAACCATGCAAGAGTCTTTGGCTCAATTGCAGCGCGAGTACAAGGAGAAAATGCGTGAATACAATGCATTGAAACGTAACTTGGATCGCACCACTTTGGAGCTGCAACTGGTACAGGGCCAGTTGAATGAGCGCGATTCTTTGATAGCGGAACAGGGTCTTGTGATTGTAGCTATTGAGAACTCCGATGGCAGTGATGCCAAGCGGGCTCTAGTCAGTGTTGATAACGCCAATGTCTTAGCCTCTGTGCAGGGTTCGTTAGATGTAAGACTTAAAAAATTTAGCGAAGATAAACAGCTGCTTCTTGCGGAGGTACAGAAGCTCAATGAACAATTGGAGGAGTATAAAAGTGACGGCAAAATAGGCCACGGCAATTCGTCGTACGGAACATTCGGCTATGACGATGATTATGAGGCTCAGAGAGAAGCAAATAAAATAATTTCGGATTATAAGTATAAACTGCAAAAGGCTGAACAAGAAATTGCAAGTCTGCAGGCGAGCTTAGCACGTTCAGAAACTCAGGTTATACGATACAAGAGCACGGCGGAAGCAGCTGAAAAGGCGGAGGCCGAATTGAAAGTGGAGCGGCGTAAGCTCCAACGTGAGAACCGTGAAAATTTAGAGCGATTGGAGGAAGCGGAAACAGCAAATAATCATTTACTAAAACGGCTTGATAAATTAAAAAACGCAAAGAGTGCAATCCTGAAGGACTTATGA
- Protein Sequence
- MEAIELGDQIMNNKEDHTTIMPPTPTTTEPCLIDDGDDDDDDEKLSGGDDESESEEEVLVQFLGEANRIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQNTSGAGAGGDTISTHPARLVYGGGLLNVTRATASRRSSEDSLEDESRSLRDMKHELKDVEERFRKAMITNAQLDNDRASQTYEVKLLKDRSETMQESLAQLQREYKEKMREYNALKRNLDRTTLELQLVQGQLNERDSLIAEQGLVIVAIENSDGSDAKRALVSVDNANVLASVQGSLDVRLKKFSEDKQLLLAEVQKLNEQLEEYKSDGKIGHGNSSYGTFGYDDDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKVERRKLQRENRENLERLEEAETANNHLLKRLDKLKNAKSAILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600311;
- 90% Identity
- iTF_00612068;
- 80% Identity
- -