Basic Information

Insect: Drosophila paulistorum
Gene Symbol: PAXBP1
Assembly: GCA_018152135.1
Location: JAECXG010000805.1:9108504-9112374[-]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 0.67 6.4e+03 -3.5 0.0 221 247 594 621 580 622 0.72

2 2 2.6e-30 2.4e-26 93.0 1.0 4 272 631 839 628 841 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	0.67	6.4e+03	-3.5	0.0	221	247	594	621	580	622	0.72
2	2	2.6e-30	2.4e-26	93.0	1.0	4	272	631	839	628	841	0.94

Sequence Information

Coding Sequence: ATGTCGCTATTTAGGAAGCCAAAGAAAATTCAACGGCGGGTGTTTTCCAGCAATGTCGATGAAGATGAGGACGAAGCCGCAGCTATTGCGGACTCGGATTGTGTTGCCTCAACCGAAGACTATAGAGCCGACAGTGTTCCATCCAACAGACGCGAAAAGGAGAGATCAAGGAACAAAACGAAAAACCAAGAGGATAAGCCAAAGGCTTTGTTAAGTTTTGCAGATGATGAAGACGATGGTGATGTATTTCAGGTGCGGAAATCATCGCATAGCAAAAAGGTGATGCGTATGCTGGATAAGGAGAGACGGAAGAAGAAGCGCGAGGAACGCACCGGTGGAGGAGGGATTGGTGGGACGAGTGCTGGAAGCGGTGACGGGCAACATCTGCAGGAAAATGGTAGTACACATCATGCTCAACGTTTAGAGTCGTCCGGGGACAGTGTCAATGTTTTGGGTTCTTCTTCGGCGGCGTCTGCAAATTCTTCCTCTAGTAGATATAATAAGAGTAAAAAAAGTGATAATGATATGATCCAAACCGAAATACGCACAGACGACTTTGTGTTGGTTGTCAAGAAATCGGAAACACCAGAAGCCATTTTGAATGGACGTGCCGCCCTCTGTGCTGGCCGAGATGATTTGAGCGACAATGATGAAGAAAGCACGGCTGAGGATCAGGATAGATCGACACGACATCGATTCTCCAAGCCAGAGCATTTGAAGCAAATGCTCGAAAGCGGTTCCATACCCGATGCAGCTATGATACATGCAGCTCGCAAGCGACGCCAGCGGGCCAGGGAACAGGGTGCTGCTGATTATATTCCAGTAGAGGAACCGAAGGAGCCAAATAAACTAAGCACTCGCCTGCCCTGCGAAGATGTCGAGGGAGATCAATCGGATGATGAGGAGCGAATGGATATGAACGATATCACAGGGCGCAAGGAGCGTGAAGAACGCCGCGAACAGTTTTATGCCGTTGAGAATGATTTGACCGAGGAAGATTCCGATCATGAGATGCATGAATGGGAGAACCAACAAATACGCAAAGGAGTCACGGGGGCACAATTGGTACATGCTCAACACGAGACTGTGCTCTCACGGTTCATGATCAAGCCCGCCATTTCGGCAGGCGGTTTAGACGATGAGGAGGCAATGGGCCTGCAACCACAGTCCACATCCAGTTTACTGGAACAAGCTTATGCCAAGAGGTCTCTGGAGAAATCTCGCTCTGTGAATAAAGTCAGAAATGTGGAAAAGGAGAAAAAGACAGCAGCGTTGCGTACACCGCAGGAGATGCGAACGGCTCTGCAGACTCGACTTCAGGAGCTTAAAGAACGATCCGATGACCACAAGGCCAGCATGGCTAGAATTGAATTGGAGTTGAAATCACTAAAATTACAACAATTGGAATGCCAGCAAAATGCACCCACAGCCGCAGCCAAATATAAATTCTATCAAGAGGTTAAATGCTATGTCAATGATCTAGTCGACTGCCTGGCCGAGAAGACACCGCACATTCAAGATCTGGAGAAGCGTACACTTCAGCAATATGGGAAATATCAACGCTACTTGGTCAATCGTCGGCGACAGGATGTTCGAGATCAGGCTAAAGAAATGGCCGAAGCTTCAAAACCCATTTCGTCATGTGCTCGCCGTACACCGGAATATGAGGAGCAAGTTCGGCGAGCGGCAGAACGTGAGGGTCGTCGCACACGCCGACGCTGTGAGCGAGAACGTCAGGATTTGCTTTCATCTCATCTCGATGGCATGTCCAGCGATGATGAAGTTCCGGATCAGCAGCAGGAACAACATCTACAGGCGACTGTACAAATAAAATCGCAGTCCATGGAGGCTTTCGACGACGTTAATGATGAGTTTTATAAAATTGAACTGGTATTGCTTAAGTTCTATGCCTGGCGCAAGACCGATATGCCCTCGTATCAAGATGCCTTTGTTAGTCTATGCCTGCCAAAGATATTAACTCCGCTGGTGCGACATGAACTGCAGCTTTGGTCACCTCTGCTGGATGAGTATGCCGATCTGGAGACAATGCATTGGTATCAATCCTGCATGCTATATGCCTGCCAAGCGGATGAGACTTTGGAGCAATTGAAAAACGATCCCGATGTAAATCTGGTTCCGCTGTTAATAGAGAGAATTATTTTGCCCAAGGTTACATCTCTAGTCACCGAATGTTGGGATCCCCTCTCTACAACACAAACCTTGCGACTGGTAGGCTTTATCAATCGTTTGGGTCGGGAATTCCCATTGAGTGCAGCAACAAATAAGCAGCTCACGAAGCTATTTGAGTCAATTATGGAGCGCATGCGTCTTGCTCTTGAGAACGATGTCTTTATACCAATCTTTCCCAAACAAGTTCAAGAGGCCAAAACCTCATTTTTTCAGCGTCAATTCTGCAGCGGTCTGAAACTTTTTCGCAATTTTCTGAGCTGGCAGGGTATACTGGCGGATAAACCACTAAGGGAGTTGGCCATTGGAGCCCTACTCAATCGCTATCTTCTGATGGCGTTGCGTGTATGTTCGCCCAATGATGCCATTAACAAGGCTTACATCATAGTGAATACTTTGCCAACAGTATGGATATTGCCCAACAGTGAAACTCTGCGGAATTTAGAATTATTCATCAACTATATACGACAGACTTTGGATAGCTGTGATGCCAACAATCCTATATATATGCAATCTTGTGACAAGGCTAGGGAAATTCTACAAAGACTACATAGCACTTAA
Protein Sequence: MSLFRKPKKIQRRVFSSNVDEDEDEAAAIADSDCVASTEDYRADSVPSNRREKERSRNKTKNQEDKPKALLSFADDEDDGDVFQVRKSSHSKKVMRMLDKERRKKKREERTGGGGIGGTSAGSGDGQHLQENGSTHHAQRLESSGDSVNVLGSSSAASANSSSSRYNKSKKSDNDMIQTEIRTDDFVLVVKKSETPEAILNGRAALCAGRDDLSDNDEESTAEDQDRSTRHRFSKPEHLKQMLESGSIPDAAMIHAARKRRQRAREQGAADYIPVEEPKEPNKLSTRLPCEDVEGDQSDDEERMDMNDITGRKEREERREQFYAVENDLTEEDSDHEMHEWENQQIRKGVTGAQLVHAQHETVLSRFMIKPAISAGGLDDEEAMGLQPQSTSSLLEQAYAKRSLEKSRSVNKVRNVEKEKKTAALRTPQEMRTALQTRLQELKERSDDHKASMARIELELKSLKLQQLECQQNAPTAAAKYKFYQEVKCYVNDLVDCLAEKTPHIQDLEKRTLQQYGKYQRYLVNRRRQDVRDQAKEMAEASKPISSCARRTPEYEEQVRRAAEREGRRTRRRCERERQDLLSSHLDGMSSDDEVPDQQQEQHLQATVQIKSQSMEAFDDVNDEFYKIELVLLKFYAWRKTDMPSYQDAFVSLCLPKILTPLVRHELQLWSPLLDEYADLETMHWYQSCMLYACQADETLEQLKNDPDVNLVPLLIERIILPKVTSLVTECWDPLSTTQTLRLVGFINRLGREFPLSAATNKQLTKLFESIMERMRLALENDVFIPIFPKQVQEAKTSFFQRQFCSGLKLFRNFLSWQGILADKPLRELAIGALLNRYLLMALRVCSPNDAINKAYIIVNTLPTVWILPNSETLRNLELFINYIRQTLDSCDANNPIYMQSCDKAREILQRLHST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00919050;
90% Identity: iTF_00604086;
80% Identity: -