Dpau015088.1
Basic Information
- Insect
- Drosophila paulistorum
- Gene Symbol
- bab1
- Assembly
- GCA_018152135.1
- Location
- JAECXG010000606.1:14255327-14258873[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.3e-18 1.5e-14 53.5 0.0 1 43 55 98 55 100 0.95 2 3 3.5 8.2e+03 -3.3 0.2 7 18 182 192 181 192 0.81 3 3 0.3 7.2e+02 0.1 0.2 15 23 217 225 215 233 0.81
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCTCATGCCTGGATGGGTGCTACCGGATCCACGCTGGCAGCAGACAGCTATCAATATCAATTGCAATCGATGTGGCAAAAATGCTGGAACACCAATCAAAATCTAATGCATCACATGCGTTTCCGTGAGCGTGGCCCATTGAAATCCTGGCGTCCCGAAACGATGGCCGAGGCCATCTTTAGTGTCCTCAAAGAGGGACTCTCTCTGTCGCAGGCGGCACGCAAATATGATATACCATATCCCACCTTTGTTCTATATGCGAATCGCGTCCACAATATGCTCGGTCCATCCATCGATGGAGGTCCCGATCTGAGGCCCAAGGGCCGTGGGCGGCCACAGAGGATTCTGCTTGGCATTTGGCCGGATGAGCATATCAAGGGTGTGATCAAGACTGTGGTGTTCCGTGATGCCACCAAGGAATTGAAGGACGACACCGCTCTGGGATTGGGTGGTCATATGCCGCCCTATGGTCGTCATTCGCCCGTATTTCCCTTGCAGGATATGAGCTTAAGCTATCCGGGAGCTGCTAGTGCCGCAGCTCTGGCTTGTTCCAATGGCATGGGCGGCGGGGGAGCTGGAGTTGGTGTGGGAGTGGGAGGCGGTCCGTCGGTTGTCGGCGGACCGGGACCGGATCAGGGCCAAATGTCACAGGAGACGGCAGCTGCTGTCGCCGCTGTGGCCCACAATATACGCCAGCAGATGCAGATGGCCGCTGCAGTGCAGCAGCAGCATCAGCATGGGGAAGCGGGACCGCCACCAGGGCTCTTCAATTTGCCACCACATCTGGCTGGCAGTGGTCCGGTGTTGGGTAGAGGGAGCAGCATTTCGCCAGCACTGAGCAGTGGCTCGGGCCCCAGGCATGCTCCACCCTCATCGCCCTGCGACAAATCCAAGACCAAAGGTAGTCCCATGCGAAGTGAAACGCCTCGCCTCCATTCACCTCTAACCGACTTGGGCCTCGAGATGAGCAGCTACAAACGAGACTATTCGCCCTCGCGTCTATTCGCCGATGACCTGGCCGAGTTGGTTGGAGCTGGCGGCGGCGGGGCAGCCAGTGTTTCCTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTGGAACCCATAACCACCACCAGCGGCGAGTAG
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDATKELKDDTALGLGGHMPPYGRHSPVFPLQDMSLSYPGAASAAALACSNGMGGGGAGVGVGVGGGPSVVGGPGPDQGQMSQETAAAVAAVAHNIRQQMQMAAAVQQQHQHGEAGPPPGLFNLPPHLAGSGPVLGRGSSISPALSSGSGPRHAPPSSPCDKSKTKGSPMRSETPRLHSPLTDLGLEMSSYKRDYSPSRLFADDLAELVGAGGGGAASVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPITTTSGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00503192;
- 90% Identity
- iTF_00523618;
- 80% Identity
- -