Dequ017780.1
Basic Information
- Insect
- Drosophila equinoxialis
- Gene Symbol
- bab1
- Assembly
- GCA_018150345.1
- Location
- JAECWI010000868.1:11715499-11717372[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.2e-18 1.5e-14 53.5 0.0 1 43 55 98 55 100 0.95 2 4 3.4 8.2e+03 -3.3 0.2 7 18 182 192 181 192 0.81 3 4 0.3 7.2e+02 0.1 0.2 15 23 217 225 215 233 0.81 4 4 8 1.9e+04 -6.2 2.6 8 13 374 379 372 385 0.48
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCTCATGCCTGGATGGGTGCTACTGGATCGACGCTGGCAGCAGACAGCTATCAATATCAATTGCAATCGATGTGGCAAAAATGCTGGAACACCAATCAAAATCTAATGCATCACATGCGTTTCCGTGAGCGTGGTCCATTGAAGTCCTGGCGTCCCGAAACGATGGCCGAGGCCATCTTTAGTGTCCTCAAAGAGGGTCTCTCTCTGTCGCAGGCGGCACGCAAATATGATATACCATATCCCACCTTTGTTCTATATGCGAATCGCGTCCACAATATGCTTGGTCCATCCATCGACGGAGGTCCCGATCTGAGGCCCAAGGGCCGTGGCCGGCCACAGAGGATTCTGCTGGGCATTTGGCCGGATGAGCATATCAAGGGTGTGATCAAGACTGTGGTGTTCCGTGATGCCACCAAGGAATTGAAGGACGACACCGCTCTGGGATTGGGTGGTCATATGCCGCCCTATGGTCGTCATTCGCCCGTATTTCCCTTGCAGGATATGAGCTTAAGCTATCCGGGAGCTGCTAGTGCCGCAGCTCTGGCTTGTTCCAATGGCATGGGCGGCGGGGGAGCTGGAGTTGGTGTGGGAGTGGGAGGCGGTCCGTCGGTTGTCGGCGGACCGGGACCGGATCAGGGCCAAATGTCACAGGAGACGGCAGCTGCTGTCGCCGCTGTGGCCCACAATATACGCCAGCAGATGCAGATGGCCGCTGCAGTGCAGCAGCAGCATCAGCATGGGGAAGCGGGACCGCCACCAGGGCTCTTCAATTTGCCACCACATCTGGCTGGCAGTGGTCCGGTGTTGGGTAGAGGGAGCAGCATTTCGCCAGCACTGAGCAGTGGCTCGGGCCCCAGGCATGCTCCACCCTCATCGCCCTGCGGTCCCGCCGGAAGTCCCATGCGAAGTGAAACGCCTCGCCTCCATTCACCTCTAACCGACTTGGGTCTCGAGATGAGCAGCTATAAACGGGATTATTCGCCCTCGCGTCTATTCGCCGATGACCTGGCCGAGTTGGTTGGAGCTGGCGGCGGGGGGGCAGCCAGTGTCTCCTCCTCATCATCGGCCACCACCACGGCGGCAGCAGCAGCAGCAGCAGCGGCGGCGGCGGCAGCGGCTGTGGCAGCCGCAACAAGTGGCGCATCCGCATCCGGTGGCGATGCCAGCGGCATCAAGGTGGAACCCATAACCACCACCAGCGGCGAGTAG
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDATKELKDDTALGLGGHMPPYGRHSPVFPLQDMSLSYPGAASAAALACSNGMGGGGAGVGVGVGGGPSVVGGPGPDQGQMSQETAAAVAAVAHNIRQQMQMAAAVQQQHQHGEAGPPPGLFNLPPHLAGSGPVLGRGSSISPALSSGSGPRHAPPSSPCGPAGSPMRSETPRLHSPLTDLGLEMSSYKRDYSPSRLFADDLAELVGAGGGGAASVSSSSSATTTAAAAAAAAAAAAAAVAAATSGASASGGDASGIKVEPITTTSGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00571062;
- 90% Identity
- iTF_00523618;
- 80% Identity
- -