Basic Information

Insect: Drosophila parthenogenetica
Gene Symbol: stc
Assembly: GCA_035047505.1
Location: JAWNPM010000241.1:3396223-3399635[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4 1.4e+04 -3.7 0.5 15 18 360 363 359 364 0.79

2 16 2 2e+04 -4.1 1.6 15 19 387 391 386 391 0.81

3 16 0.056 5.6e+02 0.8 2.0 4 11 420 427 419 428 0.90

4 16 5.9e-07 0.0058 16.8 15.1 1 19 432 449 432 449 0.93

5 16 1.7 1.7e+04 -3.9 0.9 6 10 475 479 474 479 0.88

6 16 7.3e-09 7.3e-05 22.9 12.2 1 18 485 502 485 503 0.98

7 16 1.7 1.7e+04 -3.9 1.5 7 13 507 513 507 514 0.75

8 16 2e-09 2e-05 24.6 12.9 1 19 543 561 543 561 0.98

9 16 1.1 1.1e+04 -3.3 0.5 5 10 591 596 591 596 0.90

10 16 3.6e-05 0.36 11.1 16.5 4 19 609 624 602 624 0.86

11 16 0.15 1.5e+03 -0.5 11.7 1 11 664 674 664 686 0.79

12 16 2.8e-10 2.8e-06 27.4 15.1 1 18 691 708 691 709 0.97

13 16 2 2e+04 -4.4 1.2 6 10 738 742 738 742 0.88

14 16 2 2e+04 -6.7 9.7 10 18 756 765 746 766 0.80

15 16 7.3e-08 0.00073 19.7 12.1 1 16 802 817 802 823 0.95

16 16 2.9e-07 0.0029 17.7 13.4 1 19 834 853 834 853 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4	1.4e+04	-3.7	0.5	15	18	360	363	359	364	0.79
2	16	2	2e+04	-4.1	1.6	15	19	387	391	386	391	0.81
3	16	0.056	5.6e+02	0.8	2.0	4	11	420	427	419	428	0.90
4	16	5.9e-07	0.0058	16.8	15.1	1	19	432	449	432	449	0.93
5	16	1.7	1.7e+04	-3.9	0.9	6	10	475	479	474	479	0.88
6	16	7.3e-09	7.3e-05	22.9	12.2	1	18	485	502	485	503	0.98
7	16	1.7	1.7e+04	-3.9	1.5	7	13	507	513	507	514	0.75
8	16	2e-09	2e-05	24.6	12.9	1	19	543	561	543	561	0.98
9	16	1.1	1.1e+04	-3.3	0.5	5	10	591	596	591	596	0.90
10	16	3.6e-05	0.36	11.1	16.5	4	19	609	624	602	624	0.86
11	16	0.15	1.5e+03	-0.5	11.7	1	11	664	674	664	686	0.79
12	16	2.8e-10	2.8e-06	27.4	15.1	1	18	691	708	691	709	0.97
13	16	2	2e+04	-4.4	1.2	6	10	738	742	738	742	0.88
14	16	2	2e+04	-6.7	9.7	10	18	756	765	746	766	0.80
15	16	7.3e-08	0.00073	19.7	12.1	1	16	802	817	802	823	0.95
16	16	2.9e-07	0.0029	17.7	13.4	1	19	834	853	834	853	0.97

Sequence Information

Coding Sequence: ATGGCCGAGtattggcagcagcaacaacaacagcagcagcagccacaacaacaacaacagttgatTACAAACGGCTTCGGAGCCGCTCGCAATGAGTCAGCTTCTGTCTCGGCCGCAGCCGCTGGCTCCGGCGCTaccagtggcaacaacaataacaactatgttaattttaatcagtttatCACACAACATAATCTGGCCAGCTCTAGTGTAGCCTACAACAATGTTGGAGCTGGCGTCGGTGCCTTTGGAGCCGGCGCATCCGCCTCCTCtgccggcagcagcagcaactttaGTGGAGTGCAACCAtactttgattattttaacGGCGACGGCGGAGcgagcagcaacaatttttcatCAGCTCCAACTACATATCCCAACTTGTACTCACCCTTTGGCAACAATCCGTTTGCCTCCGCCAGTGGCTTTGATTTCAGCACTTCCAAGCTGCAAGCATCCGCACCTGAATTTGTGCCCAATTTTGCAAAGCTCAATTTAAGCGGAGTCACAGATCAGCAAGAGCCGGCTATAGCATCATCCACATCCACGTCCACATTCAGTaacaacagtaaaaacaacaataatagcaGCACTGCCATTCAGACCAGCGagccaacaaccaacaatcaaaatcaacaacagcagcagcagcaaccacaacagcagcaacagcagaggCAGCCTAAACCTCATGGCACAAACAGCCGCCAGCAGCGACGCAGCAACGATTATCGCGAGGATCGAAACGAGCGGAACGAGGAACGTTATGACCGCAAGAAGCCACAGAAGCAACAACGCTATGACAATCATCGGAGCAACAAGCGACGCGATGATTGGAATCGCAATCGTGATCGCATCAACGGTTATCCTCGAGCCAACGAGGAACTggacaccagcaacagcaacgataGCGCCCATCCATCGCCCGAGAAGCATCAACAAATCTCTCCCAGGCGTGCTCCGGACAACGAGAAGTTGTCGCAGCGTGAGAAGCTCATGCGAGACATTGATCAGCGGCGTCTGGAGTGTCTGGTGTGTGTGGAGCAGATAAAGGCACATCATGGCACTTGGTCTTGCCAGAATTGCTATCATGTGCTGCATCTTAAGTGCACCATCACATGGGCGAGCAGCTCCAAGTCAGCGGAAGGCTGGCGCTGTCCAGCCTGTCAGAATGTGCTGCAAGAATTGCCACGGGAGTATCTGTGTTTCTGTGGCAAATTGAAGAATCCACCGCTGACGCGTACAGAGTTAGCGCACAGCTGTGGCGAGCTCTGCTGCCGTGTCGAGGGATGTAGCCATGCTTGCACGCTGCTCTGCCATCCAGGTCCATGTCCACCATGTCAGGCGAACGTAAGTCGCAGCTGCGGTTGCGGACGCACCAACAAGATGATGCAGTGCGCCCTCAAGCAGCCGCTGCAGTGTGAGGCCATTTGCGATAAACTGCTCAACTGCAGCGAACATCGTTGCCAGCAACTGTGCCACGATGGCAAGTGTGAGCCGTGTGCGGAGCAGGTGCAGCAGAATTGCCACTGCGGCAAGCAGCAGCGTGAGGTGTTGTGTACGCGAGAGAGTCAGGACAAGCGCAACTACTCGTGCAAGGAGTGCTGTGGCAAGCCCTTGCCGTGTGGCAATCACAAGTGCAAGGATTCCTGTCATGCTGGTGCCTGTCGTCCCTGCAAACTGAGTCCGACACAAATCACCAGCTGTCCGTGTGGCAAGCTGCCAGTGCCGACGGAGCAGCGAAGCAGTTGCCTTGATCCTGTGCCCACGTGTGAGGGCGTCTGTGGCAAGACTCTGCGCTGTGGCAAGCCAGCGCATCCGCATCAGTGTACCAGCAAGTGCCACTTGGGACAATGTCCGCCCTGCACAAAACAAACTGCCGTCAAGTGCCGTTGTGGACACATGGATCAGATGATTAAATGTCGCCAGCTCTCAACGCGTGCGGACGATGCACGCTGCAAGCGACGTTGCACCAAAAAGCGCAGTTGTGGcaagcacaaatgcaacgtggAATGCTGCATCGATATCGACCACGCCTGTCCATTGCCCTGCAATCGGACACTGAGTTGTGGTCGCCACAAATGCGATCAGCCCTGTCATCGTGGCAATTGCCCGCCATGCTATCGCAGCAGCTTCGAGGAGCTCTATTGTGAGTGCGGCGCGGAGGTCATTTATCCACCTGTGCCTTGTGGCACCAAGAAGCCCATCTGCAAGCGTCCCTGCTCCCGCACCCATGGCTGTGAGCATGCTCCCCAGCACAACTGTCATGCGGCAGCGAGTTGTCCACCCTGCATGATGTTTACCACGAAATGGTGTCATGGTAATCATGAGCAGCGGAAGACTATTCCCTGCTCCCAGGCCAGTTTCAGTTGTGGCCTTGCGTGTGGCAAACCACTCGCCTGTGGACGGCACAAGTGCATTAGGTCGTGTCACGAGGGCGACTGCCAGCAGCCGGGTGAATTGTGTCGTCAAAACTGCATCAAGCCACGCCTTCACTGTGGACACAAGTGTGCGGCCAGTTGTCACGAGGGCGATTGCCCCGATACACCCTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGTGGCAATCGCAAGCAGAATCGCAGTTGCCAGGAGCTGGCCAGGGAGCACAGTCGCATTGCAACAGCCCAGCTGGCGTCCTCCATGGCGGAGATGTCGCGTGGTAACTACATGGAACTCAGCGAAATTCTGGCGCCCACCAAAACCAGCAAATCTAACAAAACGCTGGACTGTAATGAGGAGTGTCGTCTGTTGGAGCGTAATCGCCGCTTGGCCATCGGATTGCAGTCGCGTAATCCGGACACACAGCTGAAATCCCTAACGAAATATTCGGAATTCACGCGTGGATTTGCCAAGCGTAATCCGACTTTAACCAAGAGCGTCTATGAGACATTGGGCGATTTGGTTAAATTGGCCAAGGAGAGCAAACAGAAGTCGAGAAGTCATTCGTTTCCAACGATGAATCGTGAGAAACGTCAACTGGTGCACGAGTTGTGTGAAGTGTTTGGCGTAGAGTCCGTCTCCTACGATAAGGAGCCCAATCGGAATGTGGTAGCCACGGCACATAAAGACCGcTGTTGGTTACCAGCCACAAGCATCATGGAGGTTCTGGCACGCGAATCTGGTCAACGTCGCGTTCCAGTGCCCAGTAATAACGCCTGGAGTAGTCTCAAAAAGTAG
Protein Sequence: MAEYWQQQQQQQQQPQQQQQLITNGFGAARNESASVSAAAAGSGATSGNNNNNYVNFNQFITQHNLASSSVAYNNVGAGVGAFGAGASASSAGSSSNFSGVQPYFDYFNGDGGASSNNFSSAPTTYPNLYSPFGNNPFASASGFDFSTSKLQASAPEFVPNFAKLNLSGVTDQQEPAIASSTSTSTFSNNSKNNNNSSTAIQTSEPTTNNQNQQQQQQQPQQQQQQRQPKPHGTNSRQQRRSNDYREDRNERNEERYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRANEELDTSNSNDSAHPSPEKHQQISPRRAPDNEKLSQREKLMRDIDQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTNKMMQCALKQPLQCEAICDKLLNCSEHRCQQLCHDGKCEPCAEQVQQNCHCGKQQREVLCTRESQDKRNYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPTEQRSSCLDPVPTCEGVCGKTLRCGKPAHPHQCTSKCHLGQCPPCTKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNVECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHAPQHNCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLACGRHKCIRSCHEGDCQQPGELCRQNCIKPRLHCGHKCAASCHEGDCPDTPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKTSKSNKTLDCNEECRLLERNRRLAIGLQSRNPDTQLKSLTKYSEFTRGFAKRNPTLTKSVYETLGDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKDRCWLPATSIMEVLARESGQRRVPVPSNNAWSSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00479179;
80% Identity: -