Basic Information

Insect: Drosophila arawakana
Gene Symbol: stc
Assembly: GCA_018151165.1
Location: JAECWX010000440.1:2048321-2051739[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4 1.2e+04 -3.7 0.5 15 18 367 370 366 371 0.79

2 16 2 1.6e+04 -4.1 1.6 15 19 394 398 393 398 0.81

3 16 0.057 4.5e+02 0.8 2.0 4 11 427 434 426 435 0.90

4 16 5.9e-07 0.0047 16.8 15.1 1 19 439 456 439 456 0.93

5 16 1.7 1.4e+04 -3.9 0.9 6 10 482 486 481 486 0.88

6 16 7.4e-09 5.9e-05 22.8 12.2 1 18 492 509 492 510 0.98

7 16 1.7 1.4e+04 -3.9 1.5 7 13 514 520 514 521 0.75

8 16 2e-09 1.6e-05 24.6 12.9 1 19 550 568 550 568 0.98

9 16 1.1 9e+03 -3.3 0.5 5 10 598 603 598 603 0.90

10 16 3.6e-05 0.29 11.0 16.5 4 19 616 631 609 631 0.86

11 16 0.15 1.2e+03 -0.5 11.7 1 11 671 681 671 693 0.79

12 16 2.8e-10 2.2e-06 27.4 15.1 1 18 698 715 698 716 0.97

13 16 2 1.6e+04 -4.4 1.2 6 10 745 749 745 749 0.88

14 16 2 1.6e+04 -6.9 9.7 10 18 763 772 753 773 0.80

15 16 7.4e-08 0.00059 19.6 12.1 1 16 809 824 809 830 0.95

16 16 2.9e-07 0.0023 17.7 13.4 1 19 841 860 841 860 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4	1.2e+04	-3.7	0.5	15	18	367	370	366	371	0.79
2	16	2	1.6e+04	-4.1	1.6	15	19	394	398	393	398	0.81
3	16	0.057	4.5e+02	0.8	2.0	4	11	427	434	426	435	0.90
4	16	5.9e-07	0.0047	16.8	15.1	1	19	439	456	439	456	0.93
5	16	1.7	1.4e+04	-3.9	0.9	6	10	482	486	481	486	0.88
6	16	7.4e-09	5.9e-05	22.8	12.2	1	18	492	509	492	510	0.98
7	16	1.7	1.4e+04	-3.9	1.5	7	13	514	520	514	521	0.75
8	16	2e-09	1.6e-05	24.6	12.9	1	19	550	568	550	568	0.98
9	16	1.1	9e+03	-3.3	0.5	5	10	598	603	598	603	0.90
10	16	3.6e-05	0.29	11.0	16.5	4	19	616	631	609	631	0.86
11	16	0.15	1.2e+03	-0.5	11.7	1	11	671	681	671	693	0.79
12	16	2.8e-10	2.2e-06	27.4	15.1	1	18	698	715	698	716	0.97
13	16	2	1.6e+04	-4.4	1.2	6	10	745	749	745	749	0.88
14	16	2	1.6e+04	-6.9	9.7	10	18	763	772	753	773	0.80
15	16	7.4e-08	0.00059	19.6	12.1	1	16	809	824	809	830	0.95
16	16	2.9e-07	0.0023	17.7	13.4	1	19	841	860	841	860	0.97

Sequence Information

Coding Sequence: ATGGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGCCGCTCGCAATGAGTCAGCTTCTGGCTCGGCCGCAGCCGCTGCCTCTGGCGCTACCAGTGGCAACAACAATAACAACTATGTTAATTTTAATCAGTTTATCACACAACATAATCTGGCCAGCTCCAATGTAGCCTACAACAATATTGGACCTGGCGTCGGTGCCTTTGGAGCCGGCGCCTCCGCTGCTGCCTCCTCTGCCGGCAACAGCAACAACTTTAGTGGAGTAAGTGCACCGACAACAGTGGTGTTCCGATGCCGCCGCGATGGCAGTTTTTTCGGAGCGAGCGGCAACAATTTTCCATCAGCTCCAACTACATATCCCAATTTATACTCACCCTTTGGCAACAATCCTTTTGCCTCCGGCAGTGGCTTTGATTTCAGCACTTCCAAGCTACAAGCATCCGCACCTGAATTTGTGCCCAATTTTGCCAAGCTTAGTTTAAGCGGAGTCACAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTATCGTGAGGATCGAAACGAGCGGAACGAGGAACGTTATGACCGCAAGAAGCCACAGAAGCAACAACGCTATGACAATCATCGGAGCAACAAGCGACGTGATGATTGGAATCGCAATCGGGATCGCATCAATGGCTATCCACGTGCCAACGAGGAACTAGACACCAGTAATAGCAACGATAGCGCCCATCCATCGCCCGAGAAGCATCAGCAAATGTCGCCTAGACGTGCTCCGGATAATGAAAAGTTGTCGCAGCGTGAGAAGCTCATGCGGGACATTGATCAGCGGCGTCTGGAGTGTCTGGTGTGTGTGGAGCAGATCAAGGCACATCATGGCACTTGGTCCTGCCAGAATTGCTATCATGTGCTGCATCTTAAGTGTACCATTACCTGGGCAAGCAGCTCGAAGTCAGCAGAAGGCTGGCGCTGTCCAGCCTGCCAAAACGTGCTGCAGGAACTGCCAAGGGAGTACCTCTGTTTCTGTGGTAAACTGAAGAATCCACCACTGACGCGTACGGAGTTGGCGCACAGCTGTGGCGAGCTATGCTGTCGTGTCGAGGGCTGTAGTCATGCCTGTACGCTGCTCTGCCATCCGGGTCCATGTCCGCCATGTCAGGCGAACGTGAGTCGCAGCTGCGGTTGTGGACGCACCAACAAGATGATGCAGTGCGCTCTCAAGCAACCACTGCAGTGCGAGGCCATTTGCGATAAGCTGCTCAACTGCAGCGAACATCGTTGCCAGCAGCTGTGCCACGATGGCAAGTGTGAGCCGTGTGCAGAACAAGTGCAGCAGAATTGTCACTGTGGCAAGCAGCAACGTGAGGTGTTGTGTACGCGAGAGAGTCAGGATAAACGCAACTACTCGTGTAAGGAGTGCTGTGGTAAGCCCTTGCCGTGTGGCAATCACAAGTGCAAGGATTCCTGTCATGCTGGTGCCTGTCGTCCCTGCAAGCTGAGTCCCACACAAATTACTAGTTGTCCGTGTGGGAAGCTGCCAGTACCGACGGAGCAGCGTAGCAGTTGCCTTGATCCTGTGCCCACGTGTGAAGGCGTCTGTGGCAAGACTCTGCGCTGTGGCAAGCCAGCGCATCCGCATCAGTGCACCAGCAAGTGCCACTTGGGGCAATGTCCGCCCTGCACCAAACAAACTGCCGTCAAGTGCCGTTGTGGACACATGGATCAGATGATCAAGTGTCGCCAGCTTTCAACGCGTGCAGACGATGCACGCTGCAAGCGACGTTGCACAAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAACGTGGAATGCTGCATCGATATCGATCACGCCTGTCCATTACCCTGTAATCGAACACTGAGTTGTGGTCGCCACAAATGCGATCAGCCGTGTCATCGTGGCAACTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTCTATTGTGAGTGCGGTGCGGAGGTCATCTATCCACCTGTGCCTTGTGGCACCAAGAAGCCCATCTGCAAGCGTCCCTGCTCCCGCACCCATGGCTGTGAGCATGCTCCTCAGCACAATTGTCATGCGGCAACGAGTTGTCCACCGTGCATGATGTTCACCACGAAATGGTGTCATGGTAACCATGAGCAGCGCAAGACTATACCATGCTCTCAGGCTAGTTTCAGCTGTGGCCTTGCCTGTGGCAAACCACTCGCCTGTGGTCGTCATAAGTGCATCAGGTCGTGTCACGAGGGCGACTGCCAGCAGCCGGGTGAACTGTGCCGTCAAAACTGCATCAAGCCACGACTTCAGTGTGGACACAAGTGTGCGGCCAGTTGTCATGAGGGCGATTGCCCCGATACGCCCTGCAAGGAGCTTGTCGAGGTGCAGTGCGAGTGTGGCAATCGCAAGCAGAATCGCAGCTGCCAGGAACTGGCCAGAGAACATAGTCGCATTGCCACTGCGCAGCTGGCGTCCTCCATGGCGGAGATGTCGCGTGGCAACTACATGGAACTCAGCGAAATCCTGGCGCCCACCAAAACCAGCAAATCCAACAAAACGCTGGACTGTAATGAGGAGTGTCGTCTGTTGGAGCGTAATCGCCGCTTGGCCATTGGATTACAGTCGCGTAACCCAGACACTCAGCTGAAATCCCTCACGAAATATTCGGAATTTACGCGTGGATTTGCCAAGCGTAATCCGACTTTGACCAAGAGCGTCTATGAGACTTTAGGCGATTTGGTTAAATTGGCTAAGGAGAGCAAACAGAAGTCGAGAAGTCATTCGTTTCCCACCATGAATCGCGAGAAGCGTCAACTGGTACACGAGCTGTGTGAAGTGTTTGGGGTGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGTAATGTGGTGGCCACGGCTCATAAAGACCGCTGTTGGTTGCCAGCCACAAGCATCATGGAGGTTCTGGCACGCGAATCTGGACAACGTCGCGTACCAGTGCCCAGTAATAACGCCTGGAGCAGTCTCAAAAAGTAG
Protein Sequence: MAXXXXXXXXXXXXXXXXXXXXXXXGAARNESASGSAAAAASGATSGNNNNNYVNFNQFITQHNLASSNVAYNNIGPGVGAFGAGASAAASSAGNSNNFSGVSAPTTVVFRCRRDGSFFGASGNNFPSAPTTYPNLYSPFGNNPFASGSGFDFSTSKLQASAPEFVPNFAKLSLSGVTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYREDRNERNEERYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRANEELDTSNSNDSAHPSPEKHQQMSPRRAPDNEKLSQREKLMRDIDQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTNKMMQCALKQPLQCEAICDKLLNCSEHRCQQLCHDGKCEPCAEQVQQNCHCGKQQREVLCTRESQDKRNYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPTEQRSSCLDPVPTCEGVCGKTLRCGKPAHPHQCTSKCHLGQCPPCTKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNVECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHAPQHNCHAATSCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLACGRHKCIRSCHEGDCQQPGELCRQNCIKPRLQCGHKCAASCHEGDCPDTPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKTSKSNKTLDCNEECRLLERNRRLAIGLQSRNPDTQLKSLTKYSEFTRGFAKRNPTLTKSVYETLGDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKDRCWLPATSIMEVLARESGQRRVPVPSNNAWSSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00510950;
90% Identity: iTF_00569388;
80% Identity: -